Click here to switch to the map view.

The map label for this gene is yqkD [H]

Identifier: 227816885

GI number: 227816885

Start: 3953585

End: 3954541

Strand: Direct

Name: yqkD [H]

Synonym: BAMEG_4368

Alternate gene names: 227816885

Gene position: 3953585-3954541 (Clockwise)

Preceding gene: 227816882

Following gene: 227816887

Centisome position: 75.59

GC content: 34.27

Gene sequence:

>957_bases
ATGAAACGTTTTTTTGCAGCATTGTTTACTATACTAGGTGCGATAACTGCCCTTGGAATTTTCTTTACAAATAAAGTGAT
GTACTTAAAGAAAAAAACAGAAGAAGAAGTACTCGAAAGAGAAACGAAAAAACATTTTCGTATAGAAGATTTTGATGCTC
TTCATAAAGAAGAAATTCATATTCCTTCGCAATTCGGATATGATCTCCACGGATATTACATTCCTGCCGATCATTCCAAC
AAATTTATGATTTTTTGTCACGGCGTAACTGTAAATAAAATGAACTCTGTAAAATATGCAAGGTTATTTTTAAACAGAGG
ATATAATGTCGTTATTTACGATCATCGTCGTCATGGTAAAACTGGTGGGAAAACAACAAGCTATGGATACTATGAAAAGC
ATGATTTAAAATCCGTAGTTGACTGGCTAAAAAGTCGTTTTGGAACAAATATAACACTCGGTATTCATGGTGAATCGATG
GGAGCTGCAACACTTCTTCAATACGCAGGACTTGTAGAAGATGGCGCTGATTTCTATATTGCAGATTGTCCTTTCTCTGA
TTTTTACGGACAATTACAGCACCGTTTAAAGGTTGAATTCCATTTACCGAAATGGCCTTTATTACCTTTAGCAAATGCTT
TCTTAAAAGTGCGTGACGGTTATACGATTCGTGAAGTTTCACCAATCGATTGTATCAAGAACATTAACAATCCCGTTCTC
TTTATTCATAGTAAAGATGACGATTATATTTTAGCTGATATGACAAAAGCGTTATATGAAGCAAAAGAGAATAATAAACA
ACTTTATATTGCAGAACACGGTGCTCACGCTTGCTCTTATAACGAAAATAAAGAAGAGTATGAAGCGGCAGTCGATCAAT
TTTTAAACTCATATGTAAAAGAAACAAAAAACAGGCTTATGCAAGCCTGTTTTTTTATTGCGCTAAAACGTCTGTAA

Upstream 100 bases:

>100_bases
TTTCTTGTATATGCACCATTTCCTATTTCTCCCCTTTTCTATCATTGTGATACAATATAAGTGTATCACATGTAACGGTA
TTTGGAGGATGAGGTAAAGT

Downstream 100 bases:

>100_bases
CTTGTTCCATATTTTCAGAAATCCATTGCATTGCATCATCTAACGTTGGAAATTCTGTCGTTTGAAATGTTACCTCATCT
TGCAGTAACCAAACATCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKRFFAALFTILGAITALGIFFTNKVMYLKKKTEEEVLERETKKHFRIEDFDALHKEEIHIPSQFGYDLHGYYIPADHSN
KFMIFCHGVTVNKMNSVKYARLFLNRGYNVVIYDHRRHGKTGGKTTSYGYYEKHDLKSVVDWLKSRFGTNITLGIHGESM
GAATLLQYAGLVEDGADFYIADCPFSDFYGQLQHRLKVEFHLPKWPLLPLANAFLKVRDGYTIREVSPIDCIKNINNPVL
FIHSKDDDYILADMTKALYEAKENNKQLYIAEHGAHACSYNENKEEYEAAVDQFLNSYVKETKNRLMQACFFIALKRL

Sequences:

>Translated_318_residues
MKRFFAALFTILGAITALGIFFTNKVMYLKKKTEEEVLERETKKHFRIEDFDALHKEEIHIPSQFGYDLHGYYIPADHSN
KFMIFCHGVTVNKMNSVKYARLFLNRGYNVVIYDHRRHGKTGGKTTSYGYYEKHDLKSVVDWLKSRFGTNITLGIHGESM
GAATLLQYAGLVEDGADFYIADCPFSDFYGQLQHRLKVEFHLPKWPLLPLANAFLKVRDGYTIREVSPIDCIKNINNPVL
FIHSKDDDYILADMTKALYEAKENNKQLYIAEHGAHACSYNENKEEYEAAVDQFLNSYVKETKNRLMQACFFIALKRL
>Mature_318_residues
MKRFFAALFTILGAITALGIFFTNKVMYLKKKTEEEVLERETKKHFRIEDFDALHKEEIHIPSQFGYDLHGYYIPADHSN
KFMIFCHGVTVNKMNSVKYARLFLNRGYNVVIYDHRRHGKTGGKTTSYGYYEKHDLKSVVDWLKSRFGTNITLGIHGESM
GAATLLQYAGLVEDGADFYIADCPFSDFYGQLQHRLKVEFHLPKWPLLPLANAFLKVRDGYTIREVSPIDCIKNINNPVL
FIHSKDDDYILADMTKALYEAKENNKQLYIAEHGAHACSYNENKEEYEAAVDQFLNSYVKETKNRLMQACFFIALKRL

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 36848; Mature: 36848

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFFAALFTILGAITALGIFFTNKVMYLKKKTEEEVLERETKKHFRIEDFDALHKEEIH
CHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCC
IPSQFGYDLHGYYIPADHSNKFMIFCHGVTVNKMNSVKYARLFLNRGYNVVIYDHRRHGK
CCHHCCCCCCEEEEECCCCCEEEEEEECEEECCCCHHHHHHHHHHCCCEEEEEECCCCCC
TGGKTTSYGYYEKHDLKSVVDWLKSRFGTNITLGIHGESMGAATLLQYAGLVEDGADFYI
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCCCCCCCEEE
ADCPFSDFYGQLQHRLKVEFHLPKWPLLPLANAFLKVRDGYTIREVSPIDCIKNINNPVL
EECCHHHHHHHHHHHEEEEEECCCCCHHHHHHHHEEECCCEEEECCCHHHHHHCCCCCEE
FIHSKDDDYILADMTKALYEAKENNKQLYIAEHGAHACSYNENKEEYEAAVDQFLNSYVK
EEECCCCCEEHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
ETKNRLMQACFFIALKRL
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRFFAALFTILGAITALGIFFTNKVMYLKKKTEEEVLERETKKHFRIEDFDALHKEEIH
CHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCC
IPSQFGYDLHGYYIPADHSNKFMIFCHGVTVNKMNSVKYARLFLNRGYNVVIYDHRRHGK
CCHHCCCCCCEEEEECCCCCEEEEEEECEEECCCCHHHHHHHHHHCCCEEEEEECCCCCC
TGGKTTSYGYYEKHDLKSVVDWLKSRFGTNITLGIHGESMGAATLLQYAGLVEDGADFYI
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCCCCCCCEEE
ADCPFSDFYGQLQHRLKVEFHLPKWPLLPLANAFLKVRDGYTIREVSPIDCIKNINNPVL
EECCHHHHHHHHHHHEEEEEECCCCCHHHHHHHHEEECCCEEEECCCHHHHHHCCCCCEE
FIHSKDDDYILADMTKALYEAKENNKQLYIAEHGAHACSYNENKEEYEAAVDQFLNSYVK
EEECCCCCEEHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
ETKNRLMQACFFIALKRL
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]