BacMap

Definition	Bacillus anthracis str. CDC 684, complete genome.
Accession	NC_012581
Length	5,230,115

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The map label for this gene is ytrB [H]

Identifier: 227816857

GI number: 227816857

Start: 3929318

End: 3930196

Strand: Direct

Name: ytrB [H]

Synonym: BAMEG_4339

Alternate gene names: 227816857

Gene position: 3929318-3930196 (Clockwise)

Preceding gene: 227816856

Following gene: 227816858

Centisome position: 75.13

GC content: 33.33

Gene sequence:

>879_bases
TTGAAAGTGACAAGCTTGAAGAAAACGATTGATAGTCAAACGATTTTAGACGATGTTTCTTTCACATTACAGAGAGGAAG
TATCATCGGATTACTCGGAAGAAACGGTGCGGGGAAAACAACTTTATTACGAACGATGGTCGGTATTTTAGACCCTGATG
AAGGATCTGTTACATATGGGGATACTGACATTCATAAGAATCCTGAAACGAAACAAAAAATCGTATATGTTCCGGATTCT
ACTAACATATTGAACGGATATACAGTAAAAGAAATTGTAAGGTTTTATAAAACCGTTTATACCGCGTTTGATGAAGTATA
TTTCTATGAACTGTTAGAACGTTTTAACTTACCAAACAAACGAATTCGTAGTTATTCAAAAGGAATGAAAGCACTGCTTG
CCATCATTTTAGCTATTTCTACAAAAGCAGAATATATCATTCTAGACGAACCGACAAACGGACTTGACCCTATCGTGAAA
AGGCAAATTTTACAGTTTCTCGTAGGAGAAGTGGCAGAAAAAGAGATTACGATTTTCGTCTCAACTCATCATTTAGATGA
AGTAGAACAAATTGCAGATACAATCATTATATTAAAAGGCCATACTATATCTTCTATTACATCACTAGACGATGCAAAAT
CACGATTTGCTAAAATCCAAGTAGCTTATGAACGTTCACTACCTCAAAAACTAGAAAACTTAAGCAATATTAAAATATTA
AATCAAACAGGAAAAGTATATACAATCTTAATTGAGGGAAATGTGGCTACAACACTGGAGAAGTTTTATAAAGAACAACC
TATACTCATTGAAGAATTAACAATGTCACTTGAAGATATTTTTATCACTACATTTGAGGAGGATTCACATGTTTCATAA

Upstream 100 bases:

>100_bases
CATCAATTACTATTAGAAGCCTCTTATCTTGGTGTTACGAAAGATAAAATTCATGATTGGATAGATTCATACTACAAAGA
GATTGGAGGAAATGCGGATG

Downstream 100 bases:

>100_bases
AGCTTTATGGATGAGGCAATGGAAGCAAGGAAAATATATAATTCTATTATTTTGGTTAACTAGTTTATATCAACTACCTT
ATAAATATTATCAAGAAGCG

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKVTSLKKTIDSQTILDDVSFTLQRGSIIGLLGRNGAGKTTLLRTMVGILDPDEGSVTYGDTDIHKNPETKQKIVYVPDS
TNILNGYTVKEIVRFYKTVYTAFDEVYFYELLERFNLPNKRIRSYSKGMKALLAIILAISTKAEYIILDEPTNGLDPIVK
RQILQFLVGEVAEKEITIFVSTHHLDEVEQIADTIIILKGHTISSITSLDDAKSRFAKIQVAYERSLPQKLENLSNIKIL
NQTGKVYTILIEGNVATTLEKFYKEQPILIEELTMSLEDIFITTFEEDSHVS

Sequences:

>Translated_292_residues
MKVTSLKKTIDSQTILDDVSFTLQRGSIIGLLGRNGAGKTTLLRTMVGILDPDEGSVTYGDTDIHKNPETKQKIVYVPDS
TNILNGYTVKEIVRFYKTVYTAFDEVYFYELLERFNLPNKRIRSYSKGMKALLAIILAISTKAEYIILDEPTNGLDPIVK
RQILQFLVGEVAEKEITIFVSTHHLDEVEQIADTIIILKGHTISSITSLDDAKSRFAKIQVAYERSLPQKLENLSNIKIL
NQTGKVYTILIEGNVATTLEKFYKEQPILIEELTMSLEDIFITTFEEDSHVS
>Mature_292_residues
MKVTSLKKTIDSQTILDDVSFTLQRGSIIGLLGRNGAGKTTLLRTMVGILDPDEGSVTYGDTDIHKNPETKQKIVYVPDS
TNILNGYTVKEIVRFYKTVYTAFDEVYFYELLERFNLPNKRIRSYSKGMKALLAIILAISTKAEYIILDEPTNGLDPIVK
RQILQFLVGEVAEKEITIFVSTHHLDEVEQIADTIIILKGHTISSITSLDDAKSRFAKIQVAYERSLPQKLENLSNIKIL
NQTGKVYTILIEGNVATTLEKFYKEQPILIEELTMSLEDIFITTFEEDSHVS

Specific function: Part of the ABC transporter complex YtrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI45446740, Length=204, Percent_Identity=32.3529411764706, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI47078218, Length=204, Percent_Identity=32.3529411764706, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI153792144, Length=213, Percent_Identity=28.169014084507, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI105990541, Length=202, Percent_Identity=34.1584158415842, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI27477115, Length=230, Percent_Identity=26.9565217391304, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI6005701, Length=308, Percent_Identity=25.6493506493506, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI27436953, Length=210, Percent_Identity=26.6666666666667, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI27262624, Length=211, Percent_Identity=26.0663507109005, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI27262626, Length=211, Percent_Identity=26.0663507109005, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI30795238, Length=216, Percent_Identity=28.7037037037037, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI27881501, Length=216, Percent_Identity=28.7037037037037, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI21536376, Length=192, Percent_Identity=30.7291666666667, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI150417984, Length=209, Percent_Identity=31.5789473684211, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI116734710, Length=219, Percent_Identity=29.2237442922374, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI31657092, Length=208, Percent_Identity=26.4423076923077, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI156105685, Length=206, Percent_Identity=28.6407766990291, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI157502201, Length=209, Percent_Identity=26.7942583732057, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI157502203, Length=194, Percent_Identity=28.8659793814433, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI87081782, Length=210, Percent_Identity=31.4285714285714, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI48994943, Length=209, Percent_Identity=28.7081339712919, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI48995001, Length=212, Percent_Identity=29.7169811320755, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI87082268, Length=202, Percent_Identity=30.6930693069307, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1788761, Length=220, Percent_Identity=23.6363636363636, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790739, Length=223, Percent_Identity=27.8026905829596, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1786319, Length=228, Percent_Identity=29.3859649122807, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1786698, Length=194, Percent_Identity=26.8041237113402, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788225, Length=248, Percent_Identity=26.6129032258064, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1789593, Length=222, Percent_Identity=27.9279279279279, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI2367384, Length=166, Percent_Identity=29.5180722891566, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87081791, Length=209, Percent_Identity=26.3157894736842, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790190, Length=212, Percent_Identity=28.7735849056604, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788506, Length=241, Percent_Identity=27.3858921161826, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787112, Length=207, Percent_Identity=29.951690821256, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786398, Length=198, Percent_Identity=30.8080808080808, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1786253, Length=185, Percent_Identity=22.7027027027027, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788897, Length=225, Percent_Identity=24, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788165, Length=206, Percent_Identity=28.6407766990291, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI48994883, Length=214, Percent_Identity=27.1028037383178, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1786345, Length=212, Percent_Identity=24.0566037735849, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787792, Length=197, Percent_Identity=27.4111675126904, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87081709, Length=229, Percent_Identity=25.764192139738, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789891, Length=201, Percent_Identity=25.3731343283582, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789991, Length=214, Percent_Identity=26.6355140186916, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787370, Length=209, Percent_Identity=25.3588516746411, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1788472, Length=226, Percent_Identity=25.2212389380531, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787759, Length=245, Percent_Identity=24.0816326530612, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789963, Length=287, Percent_Identity=21.9512195121951, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1789032, Length=206, Percent_Identity=23.7864077669903, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1788450, Length=208, Percent_Identity=21.6346153846154, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1789962, Length=198, Percent_Identity=26.2626262626263, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787547, Length=205, Percent_Identity=23.4146341463415, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1786563, Length=205, Percent_Identity=22.4390243902439, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1789586, Length=217, Percent_Identity=27.6497695852535, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=206, Percent_Identity=31.5533980582524, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71983510, Length=201, Percent_Identity=30.3482587064677, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI71983523, Length=201, Percent_Identity=30.3482587064677, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI71983516, Length=201, Percent_Identity=30.3482587064677, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17510237, Length=215, Percent_Identity=27.906976744186, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17565586, Length=188, Percent_Identity=27.6595744680851, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24666092, Length=261, Percent_Identity=27.2030651340996, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24582014, Length=288, Percent_Identity=29.1666666666667, Blast_Score=94, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24582012, Length=288, Percent_Identity=29.1666666666667, Blast_Score=94, Evalue=9e-20,
Organism=Drosophila melanogaster, GI85725262, Length=215, Percent_Identity=30.2325581395349, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24650853, Length=207, Percent_Identity=27.0531400966184, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24650855, Length=207, Percent_Identity=27.0531400966184, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI281362751, Length=209, Percent_Identity=27.7511961722488, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI116007328, Length=201, Percent_Identity=29.8507462686567, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28574150, Length=201, Percent_Identity=29.8507462686567, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24648314, Length=264, Percent_Identity=25.3787878787879, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24643674, Length=208, Percent_Identity=26.9230769230769, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI116007184, Length=193, Percent_Identity=27.4611398963731, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI221500365, Length=193, Percent_Identity=27.4611398963731, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI221512771, Length=206, Percent_Identity=25.7281553398058, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28573571, Length=251, Percent_Identity=27.4900398406374, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28573573, Length=251, Percent_Identity=27.4900398406374, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24648279, Length=218, Percent_Identity=28.8990825688073, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI161078426, Length=218, Percent_Identity=28.8990825688073, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI221500419, Length=215, Percent_Identity=26.9767441860465, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 32988; Mature: 32988

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTSLKKTIDSQTILDDVSFTLQRGSIIGLLGRNGAGKTTLLRTMVGILDPDEGSVTYG
CCCCHHHHHHHHHHHHHHHHHHEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEC
DTDIHKNPETKQKIVYVPDSTNILNGYTVKEIVRFYKTVYTAFDEVYFYELLERFNLPNK
CCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
RIRSYSKGMKALLAIILAISTKAEYIILDEPTNGLDPIVKRQILQFLVGEVAEKEITIFV
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
STHHLDEVEQIADTIIILKGHTISSITSLDDAKSRFAKIQVAYERSLPQKLENLSNIKIL
EECCHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEE
NQTGKVYTILIEGNVATTLEKFYKEQPILIEELTMSLEDIFITTFEEDSHVS
ECCCCEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEECCCCCCC
>Mature Secondary Structure
MKVTSLKKTIDSQTILDDVSFTLQRGSIIGLLGRNGAGKTTLLRTMVGILDPDEGSVTYG
CCCCHHHHHHHHHHHHHHHHHHEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEC
DTDIHKNPETKQKIVYVPDSTNILNGYTVKEIVRFYKTVYTAFDEVYFYELLERFNLPNK
CCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
RIRSYSKGMKALLAIILAISTKAEYIILDEPTNGLDPIVKRQILQFLVGEVAEKEITIFV
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
STHHLDEVEQIADTIIILKGHTISSITSLDDAKSRFAKIQVAYERSLPQKLENLSNIKIL
EECCHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEE
NQTGKVYTILIEGNVATTLEKFYKEQPILIEELTMSLEDIFITTFEEDSHVS
ECCCCEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]