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The map label for this gene is bdbD

Identifier: 227816584

GI number: 227816584

Start: 3696254

End: 3696907

Strand: Reverse

Name: bdbD

Synonym: BAMEG_4042

Alternate gene names: 227816584

Gene position: 3696907-3696254 (Counterclockwise)

Preceding gene: 227816585

Following gene: 227816583

Centisome position: 70.69

GC content: 33.03

Gene sequence:

>654_bases
ATGAAATCATCGAACAAACTCATGGCTCTTGGTATAGTTTTTTCCATTGCAGTATTGATTGTAATTGGGACGATTGTGTA
TAGCATCATAAATGACAAAAAAGATAAAGGGAATGAGATGTTTGCTTATTCCACACAACAATCTTTAGGGAAAGATGATG
CACCAGTTAAGGTAGTTGAATTTGGAGACTTCAAATGTCCTGCTTGTCGTACTTGGGATGTAACGGTATTACCACGATTA
AAAGAAGAGTATATCGATAAAGGTAAAGTGCAGTTATATTTTATTAACTTCCCATTTATCGGAAAAGACTCTGATTTAGG
TGCAGCAGCTGGTGAAGCAATTTATAAACAAGATCAAGATTCATTCTGGATTTTCTATGATGAGATTTATCAGAGTCAAA
AGAAAGACACGGAAGAATGGATTACAGAAGAATTGCTTCTTAACATTGTGAAAGAAAAACTTCCGAAAATTGATGTAGAA
CAATTTAAGAAGGATTTACACAGTAAAGAAATAAAAGAAAAAGTACGTAAAGATTCAGATCGTGCTCAAAAATTAAAAGT
TCAAGGTGCTCCTTCAGTATATGTGAATGGAAATCTTGCAAATCCTGATTTTGATAGCTTGAAGAAAGCAATTGATAAAG
AATTGAAAAAGTGA

Upstream 100 bases:

>100_bases
TTTATGTGAGCGTGTTCATTGCGTGACGTATGTAAGTATTGATATTATGTGTATTGTGTACAATGCTGTATATAGAATAT
GAATTTAAAGAGGAATGTAT

Downstream 100 bases:

>100_bases
TGAGTCCTCTCATCACTTTTTCGACTTTTTTCGATAAAATTCTTGCTTCCGCTTTTTTACATGCTATACTACTTTACATA
AGTTATTCTAATATCTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: Disulfide oxidoreductase D; Thiol-disulfide oxidoreductase D

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKSSNKLMALGIVFSIAVLIVIGTIVYSIINDKKDKGNEMFAYSTQQSLGKDDAPVKVVEFGDFKCPACRTWDVTVLPRL
KEEYIDKGKVQLYFINFPFIGKDSDLGAAAGEAIYKQDQDSFWIFYDEIYQSQKKDTEEWITEELLLNIVKEKLPKIDVE
QFKKDLHSKEIKEKVRKDSDRAQKLKVQGAPSVYVNGNLANPDFDSLKKAIDKELKK

Sequences:

>Translated_217_residues
MKSSNKLMALGIVFSIAVLIVIGTIVYSIINDKKDKGNEMFAYSTQQSLGKDDAPVKVVEFGDFKCPACRTWDVTVLPRL
KEEYIDKGKVQLYFINFPFIGKDSDLGAAAGEAIYKQDQDSFWIFYDEIYQSQKKDTEEWITEELLLNIVKEKLPKIDVE
QFKKDLHSKEIKEKVRKDSDRAQKLKVQGAPSVYVNGNLANPDFDSLKKAIDKELKK
>Mature_217_residues
MKSSNKLMALGIVFSIAVLIVIGTIVYSIINDKKDKGNEMFAYSTQQSLGKDDAPVKVVEFGDFKCPACRTWDVTVLPRL
KEEYIDKGKVQLYFINFPFIGKDSDLGAAAGEAIYKQDQDSFWIFYDEIYQSQKKDTEEWITEELLLNIVKEKLPKIDVE
QFKKDLHSKEIKEKVRKDSDRAQKLKVQGAPSVYVNGNLANPDFDSLKKAIDKELKK

Specific function: May be required for disulfide bond formation in some proteins

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioredoxin family. DsbA subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): BDBD_BACAN (Q81YT8)

Other databases:

- EMBL:   AE016879
- EMBL:   AE017334
- EMBL:   AE017225
- RefSeq:   NP_843079.1
- RefSeq:   YP_017166.1
- RefSeq:   YP_026791.1
- ProteinModelPortal:   Q81YT8
- EnsemblBacteria:   EBBACT00000009980
- EnsemblBacteria:   EBBACT00000015602
- EnsemblBacteria:   EBBACT00000020176
- GeneID:   1087837
- GeneID:   2817093
- GeneID:   2852151
- GenomeReviews:   AE016879_GR
- GenomeReviews:   AE017225_GR
- GenomeReviews:   AE017334_GR
- KEGG:   ban:BA_0544
- KEGG:   bar:GBAA_0544
- KEGG:   bat:BAS0513
- TIGR:   BA_0544
- TIGR:   GBAA_0544
- GeneTree:   EBGT00050000001694
- HOGENOM:   HBG693977
- OMA:   DTEEWIT
- ProtClustDB:   CLSK887877
- BioCyc:   BANT260799:BAS0513-MONOMER
- BioCyc:   BANT261594:GBAA0544-MONOMER
- InterPro:   IPR001853
- InterPro:   IPR012336
- InterPro:   IPR012335
- Gene3D:   G3DSA:3.40.30.10

Pfam domain/function: PF01323 DSBA; SSF52833 Thiordxn-like_fd

EC number: NA

Molecular weight: Translated: 24786; Mature: 24786

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00194 THIOREDOXIN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSNKLMALGIVFSIAVLIVIGTIVYSIINDKKDKGNEMFAYSTQQSLGKDDAPVKVVE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCCCCCEEEEE
FGDFKCPACRTWDVTVLPRLKEEYIDKGKVQLYFINFPFIGKDSDLGAAAGEAIYKQDQD
ECCCCCCCCCCCCEEECCHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCC
SFWIFYDEIYQSQKKDTEEWITEELLLNIVKEKLPKIDVEQFKKDLHSKEIKEKVRKDSD
CEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCH
RAQKLKVQGAPSVYVNGNLANPDFDSLKKAIDKELKK
HHHEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSSNKLMALGIVFSIAVLIVIGTIVYSIINDKKDKGNEMFAYSTQQSLGKDDAPVKVVE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCCCCCEEEEE
FGDFKCPACRTWDVTVLPRLKEEYIDKGKVQLYFINFPFIGKDSDLGAAAGEAIYKQDQD
ECCCCCCCCCCCCEEECCHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCC
SFWIFYDEIYQSQKKDTEEWITEELLLNIVKEKLPKIDVEQFKKDLHSKEIKEKVRKDSD
CEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCH
RAQKLKVQGAPSVYVNGNLANPDFDSLKKAIDKELKK
HHHEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629