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The map label for this gene is yhbA [H]

Identifier: 227816583

GI number: 227816583

Start: 3694725

End: 3695867

Strand: Reverse

Name: yhbA [H]

Synonym: BAMEG_4040

Alternate gene names: 227816583

Gene position: 3695867-3694725 (Counterclockwise)

Preceding gene: 227816584

Following gene: 227816582

Centisome position: 70.67

GC content: 38.58

Gene sequence:

>1143_bases
ATGGATTTTGAACAATTAAAGCAAGATGTCATTGCGTATAGTAAAACAATTGGTATAGATAAAATAGGCTTTGCTAGTGC
GTCACCATTTGAGGAATTAAAGCAGCGTTTAATCCAGCAGCAACAATTAAATTATCAATCTGGATTTGAAGAGCCTGATA
TAGAAAAGAGAACGAACCCACAGCTACTATTATCTGGTGCGAAATCAATTATTGCGATTGCATTAGCGTATCCTTCAAAA
TTAAAAAATGCACCATTAAGTAAGCGCGGAGAACGTCGCGGGATTTTTTGTCGTGCTTCTTGGGGACAAGATTATCATCT
TGTTTTAAGAGATCGTTTGCAAAAATTAGAAGCATATTTAATCGAAAAACTTCCAGATATAGAAGTTAAGTCCATGGTTG
ATACAGGTGAATTAAGTGATCGAGCTGTTTCGGAGCGCGCCGGTATTGGATGGAGCGGTAAGAATTGCTCTATTATTACA
CCAGAATTTGGTTCGTATGTATATTTAGGAGAAATGATTACAAACGTTCCATTCCCACCAGACCAGCCGATAGAAGATCA
ATGCGGAAGCTGTACAAAATGTATTGATATTTGTCCTACAGGTGCTTTAATACAAGGAGGACAGTTAGATTCGAAGAAAT
GTATTGCATTTTTAACACAGACAAAAGGATTCCTACCGGAAGAATATCGCGACAAAATAGGAAATCGTATTTATGGATGT
GATACTTGTCAGACAGTTTGTCCGAAAAATAAAGGAATGGATTTTCATAATCATCCTGAGATGGAACCAGATCCTGAGTT
AGTTAAGCCGTTATTAACACCGCTCTTAACAATTAGTAATCGTGATTTTAAAGAGAAATATGGAATTATGTCTGGTTCAT
GGAGAGGTAAAAAACCGCTGCAACGAAATGCAATTTTGGCACTTGCGCATTTTAAAGAGGCATCAGCAATTCCTGATTTA
ATTGGTGTTATGAAAGATGATCCAAGGCCAGTACTTCGCGGAACAGCAGCATGGGCGCTTGGGAAAATTGGTGGAGATGG
CGTGGGCGAAGCCATTGAAAAAGCGATGCAACGTGAGAAAGACGAAGAGGTTCTTCATGAAATGAATCGCGGACTTGAAT
TGTTAGCGCAGAAAAAAGAGTAG

Upstream 100 bases:

>100_bases
TGTATGCGAGAATAGAAGTAAAGAAGAGTATTCCAAAAGTGAATTGATAACCAATAGATCGTTACATAAGGGATGGATTC
ATCTGAGGAGGCGATTAGGA

Downstream 100 bases:

>100_bases
ATAATATCTCCCTTTTTCATATTGTAATATGGGAGGGAGACGAAATGGTTGTAAAAATAAATATTGAAAAGCAAGTACAA
CAATTTTTAGCATATGTAAC

Product: putative iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MDFEQLKQDVIAYSKTIGIDKIGFASASPFEELKQRLIQQQQLNYQSGFEEPDIEKRTNPQLLLSGAKSIIAIALAYPSK
LKNAPLSKRGERRGIFCRASWGQDYHLVLRDRLQKLEAYLIEKLPDIEVKSMVDTGELSDRAVSERAGIGWSGKNCSIIT
PEFGSYVYLGEMITNVPFPPDQPIEDQCGSCTKCIDICPTGALIQGGQLDSKKCIAFLTQTKGFLPEEYRDKIGNRIYGC
DTCQTVCPKNKGMDFHNHPEMEPDPELVKPLLTPLLTISNRDFKEKYGIMSGSWRGKKPLQRNAILALAHFKEASAIPDL
IGVMKDDPRPVLRGTAAWALGKIGGDGVGEAIEKAMQREKDEEVLHEMNRGLELLAQKKE

Sequences:

>Translated_380_residues
MDFEQLKQDVIAYSKTIGIDKIGFASASPFEELKQRLIQQQQLNYQSGFEEPDIEKRTNPQLLLSGAKSIIAIALAYPSK
LKNAPLSKRGERRGIFCRASWGQDYHLVLRDRLQKLEAYLIEKLPDIEVKSMVDTGELSDRAVSERAGIGWSGKNCSIIT
PEFGSYVYLGEMITNVPFPPDQPIEDQCGSCTKCIDICPTGALIQGGQLDSKKCIAFLTQTKGFLPEEYRDKIGNRIYGC
DTCQTVCPKNKGMDFHNHPEMEPDPELVKPLLTPLLTISNRDFKEKYGIMSGSWRGKKPLQRNAILALAHFKEASAIPDL
IGVMKDDPRPVLRGTAAWALGKIGGDGVGEAIEKAMQREKDEEVLHEMNRGLELLAQKKE
>Mature_380_residues
MDFEQLKQDVIAYSKTIGIDKIGFASASPFEELKQRLIQQQQLNYQSGFEEPDIEKRTNPQLLLSGAKSIIAIALAYPSK
LKNAPLSKRGERRGIFCRASWGQDYHLVLRDRLQKLEAYLIEKLPDIEVKSMVDTGELSDRAVSERAGIGWSGKNCSIIT
PEFGSYVYLGEMITNVPFPPDQPIEDQCGSCTKCIDICPTGALIQGGQLDSKKCIAFLTQTKGFLPEEYRDKIGNRIYGC
DTCQTVCPKNKGMDFHNHPEMEPDPELVKPLLTPLLTISNRDFKEKYGIMSGSWRGKKPLQRNAILALAHFKEASAIPDL
IGVMKDDPRPVLRGTAAWALGKIGGDGVGEAIEKAMQREKDEEVLHEMNRGLELLAQKKE

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=351, Percent_Identity=31.0541310541311, Blast_Score=185, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 42417; Mature: 42417

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFEQLKQDVIAYSKTIGIDKIGFASASPFEELKQRLIQQQQLNYQSGFEEPDIEKRTNP
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
QLLLSGAKSIIAIALAYPSKLKNAPLSKRGERRGIFCRASWGQDYHLVLRDRLQKLEAYL
HHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
IEKLPDIEVKSMVDTGELSDRAVSERAGIGWSGKNCSIITPEFGSYVYLGEMITNVPFPP
HHHCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCEEEHHHHHHCCCCCC
DQPIEDQCGSCTKCIDICPTGALIQGGQLDSKKCIAFLTQTKGFLPEEYRDKIGNRIYGC
CCCHHHHHCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHCCEEECC
DTCQTVCPKNKGMDFHNHPEMEPDPELVKPLLTPLLTISNRDFKEKYGIMSGSWRGKKPL
CHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCC
QRNAILALAHFKEASAIPDLIGVMKDDPRPVLRGTAAWALGKIGGDGVGEAIEKAMQREK
HHHHEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCH
DEEVLHEMNRGLELLAQKKE
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDFEQLKQDVIAYSKTIGIDKIGFASASPFEELKQRLIQQQQLNYQSGFEEPDIEKRTNP
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
QLLLSGAKSIIAIALAYPSKLKNAPLSKRGERRGIFCRASWGQDYHLVLRDRLQKLEAYL
HHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
IEKLPDIEVKSMVDTGELSDRAVSERAGIGWSGKNCSIITPEFGSYVYLGEMITNVPFPP
HHHCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCEEEHHHHHHCCCCCC
DQPIEDQCGSCTKCIDICPTGALIQGGQLDSKKCIAFLTQTKGFLPEEYRDKIGNRIYGC
CCCHHHHHCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHCCEEECC
DTCQTVCPKNKGMDFHNHPEMEPDPELVKPLLTPLLTISNRDFKEKYGIMSGSWRGKKPL
CHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCC
QRNAILALAHFKEASAIPDLIGVMKDDPRPVLRGTAAWALGKIGGDGVGEAIEKAMQREK
HHHHEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCH
DEEVLHEMNRGLELLAQKKE
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]