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The map label for this gene is fdhD1 [H]

Identifier: 227816541

GI number: 227816541

Start: 3640875

End: 3641681

Strand: Direct

Name: fdhD1 [H]

Synonym: BAMEG_3998

Alternate gene names: 227816541

Gene position: 3640875-3641681 (Clockwise)

Preceding gene: 227816532

Following gene: 227816542

Centisome position: 69.61

GC content: 34.32

Gene sequence:

>807_bases
ATGGGGCCTACGCAAGAGACTTATACAATTGTACGCTATCACTCTGGTACATTTTCAAAACAAATTGATGAAATCGTTAC
AGAATCTCCTATCACTATTAAATTAAATGGTGAAGAGTATGTAACAGTCGTATGTACACCAAATTACATCGAAGATATGG
TAATTGGTTTTTTAATTTCTGAAGGAATTATTTCTTCCTATAAAGATGTTGGAGAACTATGGGTTCAAAAAGATAACGGA
ATTGTCCATGTAACATCATCCAAAGTAAATCCGCTCTATCAAAATTTATATAATAAACGATACATCACTTCTTGCTGCGG
AAAAGGTAGACAAGGTTTTATTTTCGCTAACGATGCCGCAAAAGCAAAAAATTTACATAATATACATGTGACAATTACTC
CTGAAGAATGTTTTCACTTAATGAATACTTTACAACAATCTTCCACTACATTTCGCCAAACCGGCGGTGTTCACAATACC
GCGCTATGTGATCGGAACAATATTCTCCTATCAAGAATGGATATTGGAAGACATAATGCATTAGATAAAATATACGGACA
TTGTTTGCGTAACGATATATCTGTTAAAGGAAAAATCATTGCATTTAGCGGGCGTATTTCATCCGAAATTTTACTCAAAG
TTTCAAAAATCGGATGTGAAATTGTTCTATCTAAGTCCGCCCCAACAAAACTAGCATTGCAACTCGCCCATGATTTAGGC
ATTACAGTCGTAGGATTTATTAGAAATGAATCCTGCAATATTTACACACATCCACATCGAATTGATGGTTATCAATCGAA
TAACTAA

Upstream 100 bases:

>100_bases
AACCAAAATAATCTGATACCTTCCTTCTAATAGATGTTTTTATTTTTTCAATGTTTTATGATGAATGTGGGAGAAAATAC
ATATAAAAGGGGAATTTCGT

Downstream 100 bases:

>100_bases
AATAACTCCTCGGTTGAGGAGTTATTTTAGTTATAAAAATGTAATATATTAAACACTTGAATAGTTAATAAAGTTAATAT
ATAATTTCATTACATATTAA

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MGPTQETYTIVRYHSGTFSKQIDEIVTESPITIKLNGEEYVTVVCTPNYIEDMVIGFLISEGIISSYKDVGELWVQKDNG
IVHVTSSKVNPLYQNLYNKRYITSCCGKGRQGFIFANDAAKAKNLHNIHVTITPEECFHLMNTLQQSSTTFRQTGGVHNT
ALCDRNNILLSRMDIGRHNALDKIYGHCLRNDISVKGKIIAFSGRISSEILLKVSKIGCEIVLSKSAPTKLALQLAHDLG
ITVVGFIRNESCNIYTHPHRIDGYQSNN

Sequences:

>Translated_268_residues
MGPTQETYTIVRYHSGTFSKQIDEIVTESPITIKLNGEEYVTVVCTPNYIEDMVIGFLISEGIISSYKDVGELWVQKDNG
IVHVTSSKVNPLYQNLYNKRYITSCCGKGRQGFIFANDAAKAKNLHNIHVTITPEECFHLMNTLQQSSTTFRQTGGVHNT
ALCDRNNILLSRMDIGRHNALDKIYGHCLRNDISVKGKIIAFSGRISSEILLKVSKIGCEIVLSKSAPTKLALQLAHDLG
ITVVGFIRNESCNIYTHPHRIDGYQSNN
>Mature_267_residues
GPTQETYTIVRYHSGTFSKQIDEIVTESPITIKLNGEEYVTVVCTPNYIEDMVIGFLISEGIISSYKDVGELWVQKDNGI
VHVTSSKVNPLYQNLYNKRYITSCCGKGRQGFIFANDAAKAKNLHNIHVTITPEECFHLMNTLQQSSTTFRQTGGVHNTA
LCDRNNILLSRMDIGRHNALDKIYGHCLRNDISVKGKIIAFSGRISSEILLKVSKIGCEIVLSKSAPTKLALQLAHDLGI
TVVGFIRNESCNIYTHPHRIDGYQSNN

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=246, Percent_Identity=28.4552845528455, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29910; Mature: 29778

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPTQETYTIVRYHSGTFSKQIDEIVTESPITIKLNGEEYVTVVCTPNYIEDMVIGFLIS
CCCCCCEEEEEEEECCCHHHHHHHHHCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHH
EGIISSYKDVGELWVQKDNGIVHVTSSKVNPLYQNLYNKRYITSCCGKGRQGFIFANDAA
HHHHHHHHHHHHHEEECCCCEEEEECCCCCHHHHHHHCCHHHHHHHCCCCCEEEEECCCC
KAKNLHNIHVTITPEECFHLMNTLQQSSTTFRQTGGVHNTALCDRNNILLSRMDIGRHNA
CCCCCEEEEEEECHHHHHHHHHHHHHCCCHHHHCCCCCCCEEECCCCEEEEEECCCCCHH
LDKIYGHCLRNDISVKGKIIAFSGRISSEILLKVSKIGCEIVLSKSAPTKLALQLAHDLG
HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHEEEECCCEEEEEECCCCHHHHHHHHHHCC
ITVVGFIRNESCNIYTHPHRIDGYQSNN
EEEEEEEECCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
GPTQETYTIVRYHSGTFSKQIDEIVTESPITIKLNGEEYVTVVCTPNYIEDMVIGFLIS
CCCCCEEEEEEEECCCHHHHHHHHHCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHH
EGIISSYKDVGELWVQKDNGIVHVTSSKVNPLYQNLYNKRYITSCCGKGRQGFIFANDAA
HHHHHHHHHHHHHEEECCCCEEEEECCCCCHHHHHHHCCHHHHHHHCCCCCEEEEECCCC
KAKNLHNIHVTITPEECFHLMNTLQQSSTTFRQTGGVHNTALCDRNNILLSRMDIGRHNA
CCCCCEEEEEEECHHHHHHHHHHHHHCCCHHHHCCCCCCCEEECCCCEEEEEECCCCCHH
LDKIYGHCLRNDISVKGKIIAFSGRISSEILLKVSKIGCEIVLSKSAPTKLALQLAHDLG
HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHEEEECCCEEEEEECCCCHHHHHHHHHHCC
ITVVGFIRNESCNIYTHPHRIDGYQSNN
EEEEEEEECCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA