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The map label for this gene is yrhD [H]

Identifier: 227816538

GI number: 227816538

Start: 3637140

End: 3637484

Strand: Reverse

Name: yrhD [H]

Synonym: BAMEG_3995

Alternate gene names: 227816538

Gene position: 3637484-3637140 (Counterclockwise)

Preceding gene: 227816539

Following gene: 227816537

Centisome position: 69.55

GC content: 35.94

Gene sequence:

>345_bases
TTGCAGAAGGCTGGTATATTAGATGCGGCGATTAGTTTACTTGCTGCGAAGGAAGATGTTTCAAAGATCGCTGTGGAGCA
ATTAAATCGTGAACCAGTTAAAAATGCACTCAACAATATGATGGGGGCAGGAGAAGCATTATCTTCAGTTGATCCGGAAG
TAACGAAACAAATTACATCCAGCTTAGTTACGGGATTACAATTTGCAACAGATGAATTAAATAGTGGTAAAAAAACAAAA
GTGATGGATTTCTTTAAAGTGTTAAAAGATCCAGATATCAATAGAGCCATTACATTTGGTTTTAGTTTCTTGAAAGCATT
TGGACAAGGGTTAGAGAAAAAATAG

Upstream 100 bases:

>100_bases
AACAGAGGAAGAACAGAAACAGCAAGTAGCAGATGCACTTCTCAATGAGCTATCTAATAATCGTGAAGCAGTGGAAGAAA
CGATGTAGCTGTTAGCACAG

Downstream 100 bases:

>100_bases
AGTAGATGAAAAAAGTGATGGGGAGTAACCATCACTTTTTTCATTGTATGTATAAGAGTGTTCATGTTAAGCGGAATATA
TTATTATTAAAAAGATGGGT

Product: conserved protein YrhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MQKAGILDAAISLLAAKEDVSKIAVEQLNREPVKNALNNMMGAGEALSSVDPEVTKQITSSLVTGLQFATDELNSGKKTK
VMDFFKVLKDPDINRAITFGFSFLKAFGQGLEKK

Sequences:

>Translated_114_residues
MQKAGILDAAISLLAAKEDVSKIAVEQLNREPVKNALNNMMGAGEALSSVDPEVTKQITSSLVTGLQFATDELNSGKKTK
VMDFFKVLKDPDINRAITFGFSFLKAFGQGLEKK
>Mature_114_residues
MQKAGILDAAISLLAAKEDVSKIAVEQLNREPVKNALNNMMGAGEALSSVDPEVTKQITSSLVTGLQFATDELNSGKKTK
VMDFFKVLKDPDINRAITFGFSFLKAFGQGLEKK

Specific function: Unknown

COG id: COG2427

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.fulgidus AF1717 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012440 [H]

Pfam domain/function: PF07849 DUF1641 [H]

EC number: NA

Molecular weight: Translated: 12320; Mature: 12320

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKAGILDAAISLLAAKEDVSKIAVEQLNREPVKNALNNMMGAGEALSSVDPEVTKQITS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCCHHHHHHHHH
SLVTGLQFATDELNSGKKTKVMDFFKVLKDPDINRAITFGFSFLKAFGQGLEKK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQKAGILDAAISLLAAKEDVSKIAVEQLNREPVKNALNNMMGAGEALSSVDPEVTKQITS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCCHHHHHHHHH
SLVTGLQFATDELNSGKKTKVMDFFKVLKDPDINRAITFGFSFLKAFGQGLEKK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]