Click here to switch to the map view.

The map label for this gene is 227816509

Identifier: 227816509

GI number: 227816509

Start: 3602883

End: 3603836

Strand: Reverse

Name: 227816509

Synonym: BAMEG_3966

Alternate gene names: NA

Gene position: 3603836-3602883 (Counterclockwise)

Preceding gene: 227816510

Following gene: 227816508

Centisome position: 68.91

GC content: 38.89

Gene sequence:

>954_bases
ATGAAAAAAATTCTAGTAACCGGTTCTTTAGGGCAAATTGGTTCAGAACTAGTAATGAAACTTCGTGATGTATACGGCGC
ATCAAATGTTATTGCAACAGATATTCGTGAAACAGATAGTGAAGTAGTAACGTCTGGTCCATTTGAAACGTTAGATGTAA
CAGATGGACAAAAACTACATGATATTGCAAAGCGTAATGAAGTAGATACAATTATTCATTTAGCAGCTTTACTTTCAGCA
ACAGCAGAAAAAAATCCGTTATTTGCATGGAATTTAAATATGGGCGGACTTGTAAATGCATTAGAAGCAGCTCGTGAATT
AAACTGTAAGTTTTTCACGCCAAGTTCTATCGGTGCATTCGGTCCATCAACGCCGAAAGATAATACGCCACAAGATACAA
TTCAGCGTCCTACTACGATGTATGGGGTAAACAAAGTAGCAGGGGAATTACTATGTGATTATTATCATCAAAAATTTGGC
GTTGATACGCGCGGTGTACGTTTCCCAGGTTTAATTTCTTACGTAGCTCCTCCAGGAGGCGGAACAACTGACTATGCAGT
TGAAATTTACTATGAGGCGATTAAAAAAGGCACATACACCTCATACATTGCAGAAGGAACATACATGGATATGATGTACA
TGCCAGACGCTTTACAAGCGATTATTTCATTAATGGAAGCTGATCCAAGTAAGCTAGTGCATAGAAATGCATTTAATATT
ACAGCAATGAGCTTTGAGCCAGAGCAAATCGCAGCGTCAATTCGTAAACACATCCCGACGTTTACAATGGATTACGCTGT
AGATCCAGCTCGTCAAACAATTGCTGATAGCTGGCCAAACTCTATTGATGCAACAGCGGCAATGAAAGAGTGGGGCTTTA
AAGCAGAATATGATTTAGACAAAATGACAACGGACATGTTGGTTAAGTTAAAAAAAAGCTCACAGCTGAGTTAG

Upstream 100 bases:

>100_bases
TAGATGAAGCAATTCGTAAGTATGAAAAAGTAGGGAAAGAAATGGGCATCATTTAAGTAACGACATCTTTTGAATAGCTT
GCAAATGAGGAGTGGGGAAA

Downstream 100 bases:

>100_bases
TGATGAATTAATAGGAAGGGTCGATTCTTAGGAATCGACCCTTTTAATTGAAGGAGAAAAGCAACATGCAAAGAGTTGAT
GTCGTATACGCACTAATACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKKILVTGSLGQIGSELVMKLRDVYGASNVIATDIRETDSEVVTSGPFETLDVTDGQKLHDIAKRNEVDTIIHLAALLSA
TAEKNPLFAWNLNMGGLVNALEAARELNCKFFTPSSIGAFGPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQKFG
VDTRGVRFPGLISYVAPPGGGTTDYAVEIYYEAIKKGTYTSYIAEGTYMDMMYMPDALQAIISLMEADPSKLVHRNAFNI
TAMSFEPEQIAASIRKHIPTFTMDYAVDPARQTIADSWPNSIDATAAMKEWGFKAEYDLDKMTTDMLVKLKKSSQLS

Sequences:

>Translated_317_residues
MKKILVTGSLGQIGSELVMKLRDVYGASNVIATDIRETDSEVVTSGPFETLDVTDGQKLHDIAKRNEVDTIIHLAALLSA
TAEKNPLFAWNLNMGGLVNALEAARELNCKFFTPSSIGAFGPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQKFG
VDTRGVRFPGLISYVAPPGGGTTDYAVEIYYEAIKKGTYTSYIAEGTYMDMMYMPDALQAIISLMEADPSKLVHRNAFNI
TAMSFEPEQIAASIRKHIPTFTMDYAVDPARQTIADSWPNSIDATAAMKEWGFKAEYDLDKMTTDMLVKLKKSSQLS
>Mature_317_residues
MKKILVTGSLGQIGSELVMKLRDVYGASNVIATDIRETDSEVVTSGPFETLDVTDGQKLHDIAKRNEVDTIIHLAALLSA
TAEKNPLFAWNLNMGGLVNALEAARELNCKFFTPSSIGAFGPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQKFG
VDTRGVRFPGLISYVAPPGGGTTDYAVEIYYEAIKKGTYTSYIAEGTYMDMMYMPDALQAIISLMEADPSKLVHRNAFNI
TAMSFEPEQIAASIRKHIPTFTMDYAVDPARQTIADSWPNSIDATAAMKEWGFKAEYDLDKMTTDMLVKLKKSSQLS

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI32566934, Length=310, Percent_Identity=43.5483870967742, Blast_Score=282, Evalue=2e-76,
Organism=Drosophila melanogaster, GI24667531, Length=307, Percent_Identity=44.6254071661238, Blast_Score=287, Evalue=8e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 34887; Mature: 34887

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILVTGSLGQIGSELVMKLRDVYGASNVIATDIRETDSEVVTSGPFETLDVTDGQKLH
CCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCHHHCCCCCCEEECCCCHHHH
DIAKRNEVDTIIHLAALLSATAEKNPLFAWNLNMGGLVNALEAARELNCKFFTPSSIGAF
HHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCEEECCCCCCCC
GPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQKFGVDTRGVRFPGLISYVAPPGG
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCC
GTTDYAVEIYYEAIKKGTYTSYIAEGTYMDMMYMPDALQAIISLMEADPSKLVHRNAFNI
CCCHHHHHHHHHHHHCCCHHHHEECCCEEEHEECCHHHHHHHHHHHCCHHHHHHCCCCEE
TAMSFEPEQIAASIRKHIPTFTMDYAVDPARQTIADSWPNSIDATAAMKEWGFKAEYDLD
EEECCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHH
KMTTDMLVKLKKSSQLS
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKILVTGSLGQIGSELVMKLRDVYGASNVIATDIRETDSEVVTSGPFETLDVTDGQKLH
CCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCHHHCCCCCCEEECCCCHHHH
DIAKRNEVDTIIHLAALLSATAEKNPLFAWNLNMGGLVNALEAARELNCKFFTPSSIGAF
HHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCEEECCCCCCCC
GPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQKFGVDTRGVRFPGLISYVAPPGG
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCC
GTTDYAVEIYYEAIKKGTYTSYIAEGTYMDMMYMPDALQAIISLMEADPSKLVHRNAFNI
CCCHHHHHHHHHHHHCCCHHHHEECCCEEEHEECCHHHHHHHHHHHCCHHHHHHCCCCEE
TAMSFEPEQIAASIRKHIPTFTMDYAVDPARQTIADSWPNSIDATAAMKEWGFKAEYDLD
EEECCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHH
KMTTDMLVKLKKSSQLS
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA