Click here to switch to the map view.

The map label for this gene is yhjH [H]

Identifier: 227816385

GI number: 227816385

Start: 3469702

End: 3470163

Strand: Reverse

Name: yhjH [H]

Synonym: BAMEG_3814

Alternate gene names: 227816385

Gene position: 3470163-3469702 (Counterclockwise)

Preceding gene: 227816387

Following gene: 227816384

Centisome position: 66.35

GC content: 32.68

Gene sequence:

>462_bases
TTGAAGCATGCAATGAAGCAAATGGAAATACTTTCGGACATTCGTACACTTTTGCATAAAAAAGAAGAACATTTAAAACG
ACAAAACGAGAAGTTTCTTTATGAGACGGGTGTAAGTAGTATGTCTTTATCTGAGTTACATGTAATCGAATGTATCGGAA
AAAATGGTTTGATGAATGTAACGGCAATTACGACAGAAATGGGTATGACGAAGGGAGCAATCTCTAAAATTTGTACAAAG
TTGTTTCAAAAGCAATTTGTTGAGAAGATGCAAATGTTAGATAATCAAAAAGAAATTTTCTTCCGCTTAACGGAAAGTGG
AAATGAAATATATAAAGCTCATGAGAAATTGCATAAACAAGCTGAAGAAAAGTGGCTGTTACTTTTAGATAGATACACGA
AAGAAGAACAAGATTTTATTCAAAGGTTCGTAAAGGATGTCTCCGATCATTTGGAAATATAA

Upstream 100 bases:

>100_bases
ATTTATTTTAACATGATTTTCTCACTTGTAAAGATGAAAAAATGGTTTTAAAATGGTATATAGTTAAATTGTTTCTTTGG
AAACTTAGGAGGCGAACGGA

Downstream 100 bases:

>100_bases
TTGGAAGAAAAAATTCCATTTTCTCAAGTCTTTTAAATATAATTTCTGAAAGAACTCATATATAATAGAAAAAGATACTT
AACATGGTGAATAATTAAAG

Product: transcriptional regulator, MarR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKHAMKQMEILSDIRTLLHKKEEHLKRQNEKFLYETGVSSMSLSELHVIECIGKNGLMNVTAITTEMGMTKGAISKICTK
LFQKQFVEKMQMLDNQKEIFFRLTESGNEIYKAHEKLHKQAEEKWLLLLDRYTKEEQDFIQRFVKDVSDHLEI

Sequences:

>Translated_153_residues
MKHAMKQMEILSDIRTLLHKKEEHLKRQNEKFLYETGVSSMSLSELHVIECIGKNGLMNVTAITTEMGMTKGAISKICTK
LFQKQFVEKMQMLDNQKEIFFRLTESGNEIYKAHEKLHKQAEEKWLLLLDRYTKEEQDFIQRFVKDVSDHLEI
>Mature_153_residues
MKHAMKQMEILSDIRTLLHKKEEHLKRQNEKFLYETGVSSMSLSELHVIECIGKNGLMNVTAITTEMGMTKGAISKICTK
LFQKQFVEKMQMLDNQKEIFFRLTESGNEIYKAHEKLHKQAEEKWLLLLDRYTKEEQDFIQRFVKDVSDHLEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18093; Mature: 18093

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHAMKQMEILSDIRTLLHKKEEHLKRQNEKFLYETGVSSMSLSELHVIECIGKNGLMNV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHH
TAITTEMGMTKGAISKICTKLFQKQFVEKMQMLDNQKEIFFRLTESGNEIYKAHEKLHKQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHH
AEEKWLLLLDRYTKEEQDFIQRFVKDVSDHLEI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKHAMKQMEILSDIRTLLHKKEEHLKRQNEKFLYETGVSSMSLSELHVIECIGKNGLMNV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHH
TAITTEMGMTKGAISKICTKLFQKQFVEKMQMLDNQKEIFFRLTESGNEIYKAHEKLHKQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHH
AEEKWLLLLDRYTKEEQDFIQRFVKDVSDHLEI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9457850; 9384377 [H]