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The map label for this gene is 227816368

Identifier: 227816368

GI number: 227816368

Start: 3456841

End: 3457461

Strand: Direct

Name: 227816368

Synonym: BAMEG_3797

Alternate gene names: NA

Gene position: 3456841-3457461 (Clockwise)

Preceding gene: 227816367

Following gene: 227816369

Centisome position: 66.09

GC content: 31.88

Gene sequence:

>621_bases
ATGAAATATGCACATGTCCGTAACATTTTCCCAATTCTAAATCATTCACCTTTAGAAATTCTAACTTCAGCCAAAGCATC
TGCATTAGAATTTCTTGGATTTGAAGCAATCCTTGTTTTTTATCCATTTATTAAAAAAGGAAAATCGTTAAATAAATGGG
CACATGGTGGTATTGCTTTTACGACAATTCTATACGTAATACTAGCCATCGTTTCCCTTATGTACTATAGCCCAGGGCAA
CTCCATCATACAATTTGGCCAACATTAACGATGCTAAAAATCATTAAAGTTCCTTTTATCCAAAGGTTTGAGTACATTAT
TATTTTCCTATGGTATCTTATTATTTTACCTAATCTTTGTTTAACCATTTTGTCTTCTTGTTGCATTAGTAAAAAATCTT
TTCACATACCATTTAAAATTACATTACCACTTTTTATCGCAGCCATATTTATTTCATCCTTATTTTTCACAAACCGTGAA
GGTATCAACACATTAAACACAGTCCTATCTCAAGCTGGCTTATATATTGTATACGCTTATATCCCGATTTTATTTGTATT
CCATTCACTACGATGGCATTTCAAAAATCGGTCAAAAAAATCTTCACCCGACACACCATAA

Upstream 100 bases:

>100_bases
AGCTTATTACATAATTAGGGGCGGTTTTCGTTCTGTAACTGGAATTTGTTTTTGGGGCGTTATCATACCGATTTTCGTTC
TGTTATTCTTAGTTTTTCCA

Downstream 100 bases:

>100_bases
TCTCTGATACAATTTGATTAATACATTTGTAAAGGGGACAAGCGTATGAAGAAATATGTATTTTCTTTACTTGCAGTACT
GAGTTTAATTCTTGCTGGAT

Product: spore germination protein GerYB

Products: NA

Alternate protein names: Spore Germination Protein IB; GerB Family Spore Germination Protein; Spore Germination Protein GerHB; Spore Germination; APC Family Amino Acid-Polyamine-Organocation Transporter; Germination Protein Ger(X)C Family; Spore Germination Protein GerAB; Spore Germination Protein GerYB; Spore Germination Protein GerB

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKYAHVRNIFPILNHSPLEILTSAKASALEFLGFEAILVFYPFIKKGKSLNKWAHGGIAFTTILYVILAIVSLMYYSPGQ
LHHTIWPTLTMLKIIKVPFIQRFEYIIIFLWYLIILPNLCLTILSSCCISKKSFHIPFKITLPLFIAAIFISSLFFTNRE
GINTLNTVLSQAGLYIVYAYIPILFVFHSLRWHFKNRSKKSSPDTP

Sequences:

>Translated_206_residues
MKYAHVRNIFPILNHSPLEILTSAKASALEFLGFEAILVFYPFIKKGKSLNKWAHGGIAFTTILYVILAIVSLMYYSPGQ
LHHTIWPTLTMLKIIKVPFIQRFEYIIIFLWYLIILPNLCLTILSSCCISKKSFHIPFKITLPLFIAAIFISSLFFTNRE
GINTLNTVLSQAGLYIVYAYIPILFVFHSLRWHFKNRSKKSSPDTP
>Mature_206_residues
MKYAHVRNIFPILNHSPLEILTSAKASALEFLGFEAILVFYPFIKKGKSLNKWAHGGIAFTTILYVILAIVSLMYYSPGQ
LHHTIWPTLTMLKIIKVPFIQRFEYIIIFLWYLIILPNLCLTILSSCCISKKSFHIPFKITLPLFIAAIFISSLFFTNRE
GINTLNTVLSQAGLYIVYAYIPILFVFHSLRWHFKNRSKKSSPDTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23719; Mature: 23719

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYAHVRNIFPILNHSPLEILTSAKASALEFLGFEAILVFYPFIKKGKSLNKWAHGGIAF
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHH
TTILYVILAIVSLMYYSPGQLHHTIWPTLTMLKIIKVPFIQRFEYIIIFLWYLIILPNLC
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTILSSCCISKKSFHIPFKITLPLFIAAIFISSLFFTNREGINTLNTVLSQAGLYIVYAY
HHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHH
IPILFVFHSLRWHFKNRSKKSSPDTP
HHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKYAHVRNIFPILNHSPLEILTSAKASALEFLGFEAILVFYPFIKKGKSLNKWAHGGIAF
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHH
TTILYVILAIVSLMYYSPGQLHHTIWPTLTMLKIIKVPFIQRFEYIIIFLWYLIILPNLC
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTILSSCCISKKSFHIPFKITLPLFIAAIFISSLFFTNREGINTLNTVLSQAGLYIVYAY
HHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHH
IPILFVFHSLRWHFKNRSKKSSPDTP
HHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA