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The map label for this gene is yrkJ [H]

Identifier: 227816347

GI number: 227816347

Start: 3440905

End: 3441669

Strand: Reverse

Name: yrkJ [H]

Synonym: BAMEG_3776

Alternate gene names: 227816347

Gene position: 3441669-3440905 (Counterclockwise)

Preceding gene: 227816348

Following gene: 227816344

Centisome position: 65.8

GC content: 36.47

Gene sequence:

>765_bases
ATGAGTTTAGTCGTATTACTTTTTATAATTGGGTTTATAGGATCGTTTATATCAGGAATGGTTGGAATTGGCGGTGCGAT
TATTAATTATCCGATGATTTTATACATTCCGGTATTACTAGGATTTACTGGCTATACTGCACATGAAGTGAGTGGTATTA
CAGCGGTGCAAGTATTCTTTGCAACTTTTGCAGGGGCATGGGCTTATCGGAAAAGTAATGATATGGATAAAACGCTCGTT
GTGTATATGGGAGCTAGTATATTAATAGGAAGTTTTATAGGTAGTTTTGGTGCTAATGCATTAGAGGAACATACGGTCAA
TGTTGTTTATGCAGCGTTAGCAACAATTGCTGCTATTATGATGTTCGTACCGAAACGAAATAATGGTGATGAACTGAAAT
ATAATAAATGGTTAGCAAGCTTGTTAGCGTTTATTGTAGGTGGAGCATCAGGTATTATAGGTGCTGGAGGTTCGTTCCTT
TTAGTTCCAATTATGCTAGTCATTTTAAAATTGCCAATACGTAGAACAATAGCAACATCTATTGCTATTACGTTTATTTC
CTCAGTAGGGATTACAACTGGAAAAGTAATAACTGGGCAAGTAGTTGTAATGCCAGCTCTTATTATTGCGATTGCAAGTA
TCTTTGCTGCGCCGCTTGGAGCGCGAGTTGGGAAAAGGATCAATCAAAAAGCACTACAATATATGTTATCGATTTTGATT
GTAGGAACTGCTGTTAAAATGTGGATTGATATGATATCGAAATAA

Upstream 100 bases:

>100_bases
AGAGTTTGCAGGAGTAGGAGCTTATTTAGCAGATGCTTCGGATGGGAATGTGAACTTATTCATTTAAATCACCTTCTTTT
TAGAAGGCGGGGGATATAAG

Downstream 100 bases:

>100_bases
AAGGATGGTGCTGCTTGCAGCCCATCCTTTTATTTATGCCCAAATCACTTTCATTAAGTTTTTGTATTCGTCATTTGCTA
ATTTATATAGCATTCTCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFTGYTAHEVSGITAVQVFFATFAGAWAYRKSNDMDKTLV
VYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAIMMFVPKRNNGDELKYNKWLASLLAFIVGGASGIIGAGGSFL
LVPIMLVILKLPIRRTIATSIAITFISSVGITTGKVITGQVVVMPALIIAIASIFAAPLGARVGKRINQKALQYMLSILI
VGTAVKMWIDMISK

Sequences:

>Translated_254_residues
MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFTGYTAHEVSGITAVQVFFATFAGAWAYRKSNDMDKTLV
VYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAIMMFVPKRNNGDELKYNKWLASLLAFIVGGASGIIGAGGSFL
LVPIMLVILKLPIRRTIATSIAITFISSVGITTGKVITGQVVVMPALIIAIASIFAAPLGARVGKRINQKALQYMLSILI
VGTAVKMWIDMISK
>Mature_253_residues
SLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFTGYTAHEVSGITAVQVFFATFAGAWAYRKSNDMDKTLVV
YMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAIMMFVPKRNNGDELKYNKWLASLLAFIVGGASGIIGAGGSFLL
VPIMLVILKLPIRRTIATSIAITFISSVGITTGKVITGQVVVMPALIIAIASIFAAPLGARVGKRINQKALQYMLSILIV
GTAVKMWIDMISK

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26887; Mature: 26756

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFTGYTAHEVSGITAVQVFF
CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHH
ATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAIM
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
MFVPKRNNGDELKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRRTIATS
HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IAITFISSVGITTGKVITGQVVVMPALIIAIASIFAAPLGARVGKRINQKALQYMLSILI
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGTAVKMWIDMISK
HHHHHHHHHHHHCC
>Mature Secondary Structure 
SLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFTGYTAHEVSGITAVQVFF
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHH
ATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAIM
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
MFVPKRNNGDELKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRRTIATS
HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IAITFISSVGITTGKVITGQVVVMPALIIAIASIFAAPLGARVGKRINQKALQYMLSILI
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGTAVKMWIDMISK
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]