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The map label for this gene is yhfE [H]

Identifier: 227816238

GI number: 227816238

Start: 3326430

End: 3327479

Strand: Reverse

Name: yhfE [H]

Synonym: BAMEG_3665

Alternate gene names: 227816238

Gene position: 3327479-3326430 (Counterclockwise)

Preceding gene: 227816240

Following gene: 227816237

Centisome position: 63.62

GC content: 38.0

Gene sequence:

>1050_bases
ATGGCACATCATGCGAAAGAAACGATGGAACTTATTAAGGAGCTTGTCTCTATTCCGAGTCCGTCTGGAAATACAGAGAA
AATCATTCGTTTTATTGAAAACTATGTAAGTGAGTGGAATGTAGAAACGAAGCGTAACAATAAAGGCGCTCTTATTTTAA
CGGTAAAAGGGAAAAATGATGCACAGCACCGCTTATTAACAGCGCACGTTGATACGTTAGGTGCGATGGTAAAAGAAATT
AAGCCTGACGGTCGTCTGAGTCTTTCTATGATTGGCGGATTTCGCTGGAACTCTGTAGAAGGGGAATATTGTGAAATTGA
AACATCAAGTGGTAAGACGTATACAGGAACGATTTTAATGCATCAAACGTCTGTACATGTATATAAAGATGCAGGTGAAG
CGAAACGCGATGAGAAAAATATTGAGGTTCGCATTGATGAGCGCGTATTTTCAGCTGATGAAGTACGTGAATTAGGAATT
GAAGTAGGAGACTTCGTTTCATTTGATCCACGCGTTCAAATTACAGAGAGTGGATACATAAAATCACGTCATTTAGATGA
CAAAGTAAGTGTTGCGATTCTATTAAAATTAATTAAGAGATTACAAGATGAAAATGTAACATTACCATATACAACTCATT
TCTTAATCTCTAACAATGAAGAGATTGGGTACGGCGGAAACTCTAATATTCCAGAAGAAACGGTTGAATATTTAGCAGTA
GATATGGGAGCGTTAGGTGATGGACAAGCATCTGACGAGTATACAGTATCTATTTGTGCAAAAGACTCTAGCGGTCCGTA
TCATTATGCACTGCGTAAACATTTAGTAGAGCTTGCGAAAACGAACAATATTGAATATAAAGTAGATATTTATCCGTACT
ATGGATCGGATGCATCAGCTGCAATTCGAGCTGGATTTGATGTGAAACACGCATTAATTGGAGCAGGTATTGATTCTTCT
CATGCATTTGAGCGCACGCATGAAAGTTCGATTGCTCATACAGAAGCGCTTGTTTATGCATATGTATTATCAGAGATGAT
TGCAGAATAA

Upstream 100 bases:

>100_bases
AGTGAATTTTACTATAATTTAGAAAATTGAGCTATATGAGTAGAGGTTTTCTAGCAAATTTTGTATACTAAATAATAGAA
GAAATGAGGAGGAAACGACA

Downstream 100 bases:

>100_bases
GAAAAGAAATAGGCTACTTCTAGTAGCCTATTTTTTGTTTGCAGAGAAATCGACTTTATTTAACAAAAAGTAAATGTATT
GTAATTTATTTTACAATATT

Product: Peptidase, family M20/M25/M40 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MAHHAKETMELIKELVSIPSPSGNTEKIIRFIENYVSEWNVETKRNNKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEI
KPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGI
EVGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEETVEYLAV
DMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNNIEYKVDIYPYYGSDASAAIRAGFDVKHALIGAGIDSS
HAFERTHESSIAHTEALVYAYVLSEMIAE

Sequences:

>Translated_349_residues
MAHHAKETMELIKELVSIPSPSGNTEKIIRFIENYVSEWNVETKRNNKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEI
KPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGI
EVGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEETVEYLAV
DMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNNIEYKVDIYPYYGSDASAAIRAGFDVKHALIGAGIDSS
HAFERTHESSIAHTEALVYAYVLSEMIAE
>Mature_348_residues
AHHAKETMELIKELVSIPSPSGNTEKIIRFIENYVSEWNVETKRNNKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEIK
PDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIE
VGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEETVEYLAVD
MGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNNIEYKVDIYPYYGSDASAAIRAGFDVKHALIGAGIDSSH
AFERTHESSIAHTEALVYAYVLSEMIAE

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 38864; Mature: 38733

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHHAKETMELIKELVSIPSPSGNTEKIIRFIENYVSEWNVETKRNNKGALILTVKGKND
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEECCCC
AQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILM
CHHHEEHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCEEEEECCCCCEEEEEEEE
HQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYI
EECEEEEEECCCCCCCCCCCEEEEECCHHCCHHHHHHHCCCCCCCCCCCCCEEEECCCCE
KSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEETVEYLAV
ECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCEECCCCCCCCHHHHHHHHHH
DMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNNIEYKVDIYPYYGSDASA
HHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCH
AIRAGFDVKHALIGAGIDSSHAFERTHESSIAHTEALVYAYVLSEMIAE
HHHCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AHHAKETMELIKELVSIPSPSGNTEKIIRFIENYVSEWNVETKRNNKGALILTVKGKND
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEECCCC
AQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILM
CHHHEEHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCEEEEECCCCCEEEEEEEE
HQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYI
EECEEEEEECCCCCCCCCCCEEEEECCHHCCHHHHHHHCCCCCCCCCCCCCEEEECCCCE
KSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEETVEYLAV
ECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCEECCCCCCCCHHHHHHHHHH
DMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNNIEYKVDIYPYYGSDASA
HHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCH
AIRAGFDVKHALIGAGIDSSHAFERTHESSIAHTEALVYAYVLSEMIAE
HHHCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]