Click here to switch to the map view.

The map label for this gene is mta [H]

Identifier: 227816207

GI number: 227816207

Start: 3294812

End: 3295555

Strand: Reverse

Name: mta [H]

Synonym: BAMEG_3634

Alternate gene names: 227816207

Gene position: 3295555-3294812 (Counterclockwise)

Preceding gene: 227816208

Following gene: 227816206

Centisome position: 63.01

GC content: 35.48

Gene sequence:

>744_bases
ATGGCGTGGATGATTAGTGAGTTTGCAAGTGTTGGGGATGTTACGGTGCGGACGCTTCGTTATTATGACAAGATTAATTT
ATTAAAGCCAAGCGATTATACTGAGGGAGGGCATCGGTTATATACAAAAGATGATTTGTATGTGTTACAGCAAATTCAAT
CGTTTAAGCATCTCGGTTTTTCGCTTGGGGAAATTCAAAATATTATATTACAGCGGAATGTAGAGACTGAAGATTTTTTA
AGACAAATGCATTTTCAAAGGGAATTGCTGTTGGCAGAGCAAGAAAGAATTGCGAAGGTACTTTCGCATATGGATGAGAT
GACAAAGAAGTTTCAAAAGGAAGAACGAGTGGATGTCGCTTTGTTTTCTTCTTTTTTGCAAACTTTTATATGGGAGAAAG
AAAATAAGGAATGGTTAGAGGAACATTTTTCAAAGGATAGTGTTCAGTCGTTTTATAATAATAAGGAACTAAAAGAGAAG
TTTGATCGGCGCTTTATGGATGTGATAGGGAAGTTAAAAAAGTATAAGGAAGAAGAGAAGGATCCGATTCATCATGAAGT
TCAAGTTACTCTGAAGGAGTTTTTCAATGTAATACAAGAGATAACGAACTATCTTGATATACCTCAAAGTGATATAGAGG
ATATAATCCAAAAATCAAACCTTCCACTATCCGAATTCCCAGCTCTCTTCACAACTGAAGAAGAAAACTATATAAAAGAA
GCAATGCAGCAGTTTAACAACTAG

Upstream 100 bases:

>100_bases
TATTCTTTGTAGGTTTGTTTCAATATTGTCGGCAGAATGAGATGAGCTTTTCTCATATGCTTCAGTATGTGAAAGAGAAG
TTAGCGGAGTAGGTGATGAT

Downstream 100 bases:

>100_bases
TTAAACTGCTTTTCCATTATAATAGAAGAAAAACCAAACGGAGGAAAACCCCCATGCAAACCTACAACAAACTAATCCGA
AATAAAATCCCACAAATCAT

Product: transcriptional regulator, MerR family

Products: NA

Alternate protein names: Multidrug transporter activation protein [H]

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MAWMISEFASVGDVTVRTLRYYDKINLLKPSDYTEGGHRLYTKDDLYVLQQIQSFKHLGFSLGEIQNIILQRNVETEDFL
RQMHFQRELLLAEQERIAKVLSHMDEMTKKFQKEERVDVALFSSFLQTFIWEKENKEWLEEHFSKDSVQSFYNNKELKEK
FDRRFMDVIGKLKKYKEEEKDPIHHEVQVTLKEFFNVIQEITNYLDIPQSDIEDIIQKSNLPLSEFPALFTTEEENYIKE
AMQQFNN

Sequences:

>Translated_247_residues
MAWMISEFASVGDVTVRTLRYYDKINLLKPSDYTEGGHRLYTKDDLYVLQQIQSFKHLGFSLGEIQNIILQRNVETEDFL
RQMHFQRELLLAEQERIAKVLSHMDEMTKKFQKEERVDVALFSSFLQTFIWEKENKEWLEEHFSKDSVQSFYNNKELKEK
FDRRFMDVIGKLKKYKEEEKDPIHHEVQVTLKEFFNVIQEITNYLDIPQSDIEDIIQKSNLPLSEFPALFTTEEENYIKE
AMQQFNN
>Mature_246_residues
AWMISEFASVGDVTVRTLRYYDKINLLKPSDYTEGGHRLYTKDDLYVLQQIQSFKHLGFSLGEIQNIILQRNVETEDFLR
QMHFQRELLLAEQERIAKVLSHMDEMTKKFQKEERVDVALFSSFLQTFIWEKENKEWLEEHFSKDSVQSFYNNKELKEKF
DRRFMDVIGKLKKYKEEEKDPIHHEVQVTLKEFFNVIQEITNYLDIPQSDIEDIIQKSNLPLSEFPALFTTEEENYIKEA
MQQFNN

Specific function: Global transcriptional regulator that activates transcription of bmr and blt by binding directly to their promoter. Stimulates also the expression of the mta gene itself, ydfK and ymfE [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR012925
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind; PF07739 TipAS [H]

EC number: NA

Molecular weight: Translated: 29687; Mature: 29556

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCC
>Mature Secondary Structure 
AWMISEFASVGDVTVRTLRYYDKINLLKPSDYTEGGHRLYTKDDLYVLQQIQSFKHLGF
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCC
SLGEIQNIILQRNVETEDFLRQMHFQRELLLAEQERIAKVLSHMDEMTKKFQKEERVDVA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSSFLQTFIWEKENKEWLEEHFSKDSVQSFYNNKELKEKFDRRFMDVIGKLKKYKEEEK
HHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
DPIHHEVQVTLKEFFNVIQEITNYLDIPQSDIEDIIQKSNLPLSEFPALFTTEEENYIKE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCHHCCCHHHHHHH
AMQQFNN
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]