Click here to switch to the map view.

The map label for this gene is gerPD [H]

Identifier: 227816009

GI number: 227816009

Start: 3118302

End: 3118496

Strand: Direct

Name: gerPD [H]

Synonym: BAMEG_3435

Alternate gene names: 227816009

Gene position: 3118302-3118496 (Clockwise)

Preceding gene: 227816008

Following gene: 227816010

Centisome position: 59.62

GC content: 40.0

Gene sequence:

>195_bases
ATGAACCTTAACGTTGTAAATCGCGAGTTCAAAGTCGGACAGATTAAAATGAACGGTGTATCATCGTCCGCACTCTTTTT
AATTGGGGATGCAAATTTCCTCATACTATCTTCTATTCTTGATACACCATTCGAAACTGTTACAGAGGGGCCATTTGTAC
CATTAGTAACAGATGTCCCTCCTACTCCAGGTTAA

Upstream 100 bases:

>100_bases
ACGAGATATCATTATCCAAGCTATGAAACATGATATCGACAAAGCCTTCCTCTCTTTTATTCAACACATACCGGGCAATT
TCCGAAAGGAGTAAGTATGT

Downstream 100 bases:

>100_bases
GGAGACTGATAGATTATGTTACATCATGTGTCTGTTGTCCAAAATGTTTCTATTATTTCTTTAGGGATTACTGCCGTGTT
TCAAGTTGGAGATGCCAATC

Product: spore germination protein GerPD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MNLNVVNREFKVGQIKMNGVSSSALFLIGDANFLILSSILDTPFETVTEGPFVPLVTDVPPTPG

Sequences:

>Translated_64_residues
MNLNVVNREFKVGQIKMNGVSSSALFLIGDANFLILSSILDTPFETVTEGPFVPLVTDVPPTPG
>Mature_64_residues
MNLNVVNREFKVGQIKMNGVSSSALFLIGDANFLILSSILDTPFETVTEGPFVPLVTDVPPTPG

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017257 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6849; Mature: 6849

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNVVNREFKVGQIKMNGVSSSALFLIGDANFLILSSILDTPFETVTEGPFVPLVTDVP
CCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCEEEHHHHCCCCCHHCCCCCEEEEECCC
PTPG
CCCC
>Mature Secondary Structure
MNLNVVNREFKVGQIKMNGVSSSALFLIGDANFLILSSILDTPFETVTEGPFVPLVTDVP
CCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCEEEHHHHCCCCCHHCCCCCEEEEECCC
PTPG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10715007 [H]