Click here to switch to the map view.

The map label for this gene is yjiN [C]

Identifier: 227815392

GI number: 227815392

Start: 2568561

End: 2569808

Strand: Reverse

Name: yjiN [C]

Synonym: BAMEG_2805

Alternate gene names: 227815392

Gene position: 2569808-2568561 (Counterclockwise)

Preceding gene: 227815393

Following gene: 227815387

Centisome position: 49.13

GC content: 34.05

Gene sequence:

>1248_bases
ATGTCATTACAGACTAAATATATAGCGGGTATTTCGCTTGGGGTTATGGGAGTAGGTTTTGCGGCTTCTATTCCATTTCA
AGGAACGGTAGCAGGTGAGATTATACAAGGGGGATTTGAAGCTGGGTTAGTCGGCGGGCTTGCAGATTGGTTCGCAGTTA
CAGCATTATTCCGTCATCCAATGGGAATTCCAATTCCGCATACAGCTTTGTTACCTAAAAATCGTAAACGAGTAACGAAA
GGACTCATCAATACGTTAGAAAATGAGTGGCTAACGAAAGAAAGTATTACGAATAAAGTAAAAGAGATGCAGCTAGCACA
AATGGTGCTGCAAATTGCAGAGAGAGAAATGCAGTCTGATGCTGTGAAAAAAGGGATTGTAACGATTGCGGAGAAAGCGA
TTGTTTCAATAGATACGGAAAAATTAGCGGTTATTATTGAAAAAGAATTAAAAACATATTTGCATACAATTAATACAAGT
AACATTTTACAAGTGCTTGTTGATCAATTAGTTGTGCAAGAATATGATGAAAAGACACTTGATTACATATTAGTAAAAGT
GAAAGACTGGACAGCGCAAGATGAAGCGCGTTACCAGCTCGGAAGCTTAGGTATGAAGGCGATGGAAAATATAAAAGTAG
ATGGATTCTTGCAGTTTACTTTGAAATCATTTATGAATATTGTAGATGAAGATAAAATTGGCGGTATTTTGCAGAAGTTT
ATTATTAGTAATATTAACAGCTTACAAGATGCTGATAATAGCACGAGACAACTTATATTAGCGAAAATTCGTCAAGAAAT
TATAAATGTAAAAGAAAATGAAGCGTTACTACAGGAATTAGAAAATTGGAAAGAAAAGTGGATTGCAAATTGGGATGGTA
CTGAAAAAATAAAAGAAATGCTTGAGCAAGTACAACAAAGAGCGGTTACCTTTGTAAATAACGAAGAATTTGCTGATAAA
TATGTTATTCCATTTTTACAAACACAAATGAATAAAATAAAAGAAGATGAACAAACTGTTCAAAAAATAGAAGAATGGTT
ACAAAAACAAGTTGTGAAGCTTGTTGAAAATAACCATTCAAAAATCGGAAAACTTGTACAAGAAAACCTTGATAAGTTAG
ATGATAAAACGTTAATTGAAATGATTGAAAATAATGTCGGTAAAGATTTGCAGTGGATTCGAGTGAACGGGGCAGTTTGC
GGATTTATGATTGGATTAGTGTTAGAAGGAATTAAAGCGATTATATGA

Upstream 100 bases:

>100_bases
ATTTTCACAATAGTTCTTTATAGTATAGATAAAGGATAACTAATATTGAATAAATACAACAAAAAGGCTTTATTTTACAT
AATAAGAGGATGTGTATACG

Downstream 100 bases:

>100_bases
GAAAAACCTTCCGCAATTGCGGAAGGTTTCTTATTTTTCGATAACACTCATATTTAAATTGTAAGCTTTCTCAATGTTTA
ACTTGTACGTTCCATTCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSLQTKYIAGISLGVMGVGFAASIPFQGTVAGEIIQGGFEAGLVGGLADWFAVTALFRHPMGIPIPHTALLPKNRKRVTK
GLINTLENEWLTKESITNKVKEMQLAQMVLQIAEREMQSDAVKKGIVTIAEKAIVSIDTEKLAVIIEKELKTYLHTINTS
NILQVLVDQLVVQEYDEKTLDYILVKVKDWTAQDEARYQLGSLGMKAMENIKVDGFLQFTLKSFMNIVDEDKIGGILQKF
IISNINSLQDADNSTRQLILAKIRQEIINVKENEALLQELENWKEKWIANWDGTEKIKEMLEQVQQRAVTFVNNEEFADK
YVIPFLQTQMNKIKEDEQTVQKIEEWLQKQVVKLVENNHSKIGKLVQENLDKLDDKTLIEMIENNVGKDLQWIRVNGAVC
GFMIGLVLEGIKAII

Sequences:

>Translated_415_residues
MSLQTKYIAGISLGVMGVGFAASIPFQGTVAGEIIQGGFEAGLVGGLADWFAVTALFRHPMGIPIPHTALLPKNRKRVTK
GLINTLENEWLTKESITNKVKEMQLAQMVLQIAEREMQSDAVKKGIVTIAEKAIVSIDTEKLAVIIEKELKTYLHTINTS
NILQVLVDQLVVQEYDEKTLDYILVKVKDWTAQDEARYQLGSLGMKAMENIKVDGFLQFTLKSFMNIVDEDKIGGILQKF
IISNINSLQDADNSTRQLILAKIRQEIINVKENEALLQELENWKEKWIANWDGTEKIKEMLEQVQQRAVTFVNNEEFADK
YVIPFLQTQMNKIKEDEQTVQKIEEWLQKQVVKLVENNHSKIGKLVQENLDKLDDKTLIEMIENNVGKDLQWIRVNGAVC
GFMIGLVLEGIKAII
>Mature_414_residues
SLQTKYIAGISLGVMGVGFAASIPFQGTVAGEIIQGGFEAGLVGGLADWFAVTALFRHPMGIPIPHTALLPKNRKRVTKG
LINTLENEWLTKESITNKVKEMQLAQMVLQIAEREMQSDAVKKGIVTIAEKAIVSIDTEKLAVIIEKELKTYLHTINTSN
ILQVLVDQLVVQEYDEKTLDYILVKVKDWTAQDEARYQLGSLGMKAMENIKVDGFLQFTLKSFMNIVDEDKIGGILQKFI
ISNINSLQDADNSTRQLILAKIRQEIINVKENEALLQELENWKEKWIANWDGTEKIKEMLEQVQQRAVTFVNNEEFADKY
VIPFLQTQMNKIKEDEQTVQKIEEWLQKQVVKLVENNHSKIGKLVQENLDKLDDKTLIEMIENNVGKDLQWIRVNGAVCG
FMIGLVLEGIKAII

Specific function: Unknown

COG id: COG2733

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790793, Length=390, Percent_Identity=21.2820512820513, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46955; Mature: 46824

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLQTKYIAGISLGVMGVGFAASIPFQGTVAGEIIQGGFEAGLVGGLADWFAVTALFRHP
CCCCCHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
MGIPIPHTALLPKNRKRVTKGLINTLENEWLTKESITNKVKEMQLAQMVLQIAEREMQSD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVKKGIVTIAEKAIVSIDTEKLAVIIEKELKTYLHTINTSNILQVLVDQLVVQEYDEKTL
HHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
DYILVKVKDWTAQDEARYQLGSLGMKAMENIKVDGFLQFTLKSFMNIVDEDKIGGILQKF
HHEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IISNINSLQDADNSTRQLILAKIRQEIINVKENEALLQELENWKEKWIANWDGTEKIKEM
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LEQVQQRAVTFVNNEEFADKYVIPFLQTQMNKIKEDEQTVQKIEEWLQKQVVKLVENNHS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KIGKLVQENLDKLDDKTLIEMIENNVGKDLQWIRVNGAVCGFMIGLVLEGIKAII
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLQTKYIAGISLGVMGVGFAASIPFQGTVAGEIIQGGFEAGLVGGLADWFAVTALFRHP
CCCCHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
MGIPIPHTALLPKNRKRVTKGLINTLENEWLTKESITNKVKEMQLAQMVLQIAEREMQSD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVKKGIVTIAEKAIVSIDTEKLAVIIEKELKTYLHTINTSNILQVLVDQLVVQEYDEKTL
HHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
DYILVKVKDWTAQDEARYQLGSLGMKAMENIKVDGFLQFTLKSFMNIVDEDKIGGILQKF
HHEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IISNINSLQDADNSTRQLILAKIRQEIINVKENEALLQELENWKEKWIANWDGTEKIKEM
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LEQVQQRAVTFVNNEEFADKYVIPFLQTQMNKIKEDEQTVQKIEEWLQKQVVKLVENNHS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KIGKLVQENLDKLDDKTLIEMIENNVGKDLQWIRVNGAVCGFMIGLVLEGIKAII
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA