Click here to switch to the map view.

The map label for this gene is yndJ [H]

Identifier: 227815364

GI number: 227815364

Start: 2538926

End: 2540551

Strand: Reverse

Name: yndJ [H]

Synonym: BAMEG_2776

Alternate gene names: 227815364

Gene position: 2540551-2538926 (Counterclockwise)

Preceding gene: 227815365

Following gene: 227815362

Centisome position: 48.58

GC content: 33.89

Gene sequence:

>1626_bases
ATGAAAAATATAATAGTTGGGCTTGCTTGTTATATTATTTTTCTAATATGTGAGTGGCCCGATGTAAACCCAGTTGAAGC
AATTATTTTATTATCTATTTTGTTATTTATACCGATGTCTTTTTGTATTATTGATAAAAGAGCACGAAATGGATCGTATT
TATTATTTTATAAATCCGTATCGTTTTTATATCCGATAGCAGCGATTTGTGCAATGTTAGCTTTCGTAACAAATCAATAT
ATCTTTGCGATAATTTGGTTTGTATATACGGGGATCGTTGCGTTATTTGGTATAAATAGATTACTAGAAAGAGGATGGAA
ACCGTTAGAAGAGACAGCTATCGATAGTGCGTTTATTTATTTGTTTTTAGGTGGTTTTTGGTTTTTTGCTTCTGTAGCAA
AACTCTCCATTATGCACTTTAGTTCTGACATCATTTTGCTTACCGCTGCACATTTTCATTACTCTGCATTTCTATTGCCA
TTATCAGCTGGTTTAATAGGGCGGAAGAGAGAAAAGAGCAGTAAAGTATATGATGCAATTATGTTTACTATAGCCATTTC
ACCGATGACAGTTGCGATAGGGATTACATACTCAAGGGTATTTGAATTTTTTGCAGTGTGCCTATATTTATGTGCGATTT
ATGGTTATAGCATTTACGTTTGGAAAGCGAAATTTAATGCTATCAGCGCAAAAATACTCCTAATCATATCGTCTAGTACA
CTCATGATAACAATTATGTTTTCACTTATATATTCGTACGGGAATTTGAAACATGTAATGACGATTACAATTGCTCAAAT
GGTTTGGATTCACGGTGTTGTTAATGGAATTGGAGTAGCGTTGCCGGCATTTGTCGGGTGGATGATTGAAAAGAGTGTTC
CGAACTATAAATATTACGGGAAACCAATGAGCAGATTAAGAGGAAAGGCGACAGTTGGTGAAGCATTTTTACATAACAGA
AATGTAATAGATAGCAAGGAATACAAAGGTTTAGTTTATAAAATGAATGATTTCCATAGCGGGATATTTGATAGGGCCAA
GATCCCTATAAGTATTATTCGTTTTTATGAAAATACAACAGAGTATGGATTACAATCGCATATTAAATGGACTCGCTGGT
TCCGCCCGTTTGCATTTTGTTATGAGAAAATGAGTAAGCGTGTAGGACAAATACATTTAGGAATGGGCGGCAAGTGGGAA
ACGATGCATGGATTTATCATTGGGATAATGGATGAGAAGGATGGAAGAGAGAATGTAAGGGCTTGGCTAAGAAAAAATGA
AGCAGGGAAGTCTATTTTTTTAGCCTTGTATTCAATGCATACATATAAGAACGATACATATATGAATATCGCATTACCTT
TACCATATTCGAATATGACGGGGATTTTAAAATTACGCAATGATAATAATGATTTAATGATTACTAGTAAGCTAAGAAGA
AATGGTAAGGGAGATGAGGGGATCTATTTACATACTCGTTTCTTTACAATCCGTTTACCGTTAGAAGAGACATTTATTAT
TAAAGAGGGTACAAATCAAATGTTAGAAGCTAACCATAAAATGTGGATATCCGGAGTTAAGTTTTTAGAAATTGATTATG
AGATTAAGAAAATAGAGGAGAAGTAA

Upstream 100 bases:

>100_bases
AAACAAAACAGTGCTTTCGAATTCATGTACAAGTACGAAATCCGTTAATTGGTTCATTACTTTCATATAGGGGAACATTT
GTGGAGAGGAAATAAATGAT

Downstream 100 bases:

>100_bases
GAAAAGCTTGGAGAGATTCCAAGCTTTTTACGTATAGGTAATGGTCATAGCAACTTGTTTATCTAAGTCTCGGTCCCAAA
CGTACCTTTTTCAAAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MKNIIVGLACYIIFLICEWPDVNPVEAIILLSILLFIPMSFCIIDKRARNGSYLLFYKSVSFLYPIAAICAMLAFVTNQY
IFAIIWFVYTGIVALFGINRLLERGWKPLEETAIDSAFIYLFLGGFWFFASVAKLSIMHFSSDIILLTAAHFHYSAFLLP
LSAGLIGRKREKSSKVYDAIMFTIAISPMTVAIGITYSRVFEFFAVCLYLCAIYGYSIYVWKAKFNAISAKILLIISSST
LMITIMFSLIYSYGNLKHVMTITIAQMVWIHGVVNGIGVALPAFVGWMIEKSVPNYKYYGKPMSRLRGKATVGEAFLHNR
NVIDSKEYKGLVYKMNDFHSGIFDRAKIPISIIRFYENTTEYGLQSHIKWTRWFRPFAFCYEKMSKRVGQIHLGMGGKWE
TMHGFIIGIMDEKDGRENVRAWLRKNEAGKSIFLALYSMHTYKNDTYMNIALPLPYSNMTGILKLRNDNNDLMITSKLRR
NGKGDEGIYLHTRFFTIRLPLEETFIIKEGTNQMLEANHKMWISGVKFLEIDYEIKKIEEK

Sequences:

>Translated_541_residues
MKNIIVGLACYIIFLICEWPDVNPVEAIILLSILLFIPMSFCIIDKRARNGSYLLFYKSVSFLYPIAAICAMLAFVTNQY
IFAIIWFVYTGIVALFGINRLLERGWKPLEETAIDSAFIYLFLGGFWFFASVAKLSIMHFSSDIILLTAAHFHYSAFLLP
LSAGLIGRKREKSSKVYDAIMFTIAISPMTVAIGITYSRVFEFFAVCLYLCAIYGYSIYVWKAKFNAISAKILLIISSST
LMITIMFSLIYSYGNLKHVMTITIAQMVWIHGVVNGIGVALPAFVGWMIEKSVPNYKYYGKPMSRLRGKATVGEAFLHNR
NVIDSKEYKGLVYKMNDFHSGIFDRAKIPISIIRFYENTTEYGLQSHIKWTRWFRPFAFCYEKMSKRVGQIHLGMGGKWE
TMHGFIIGIMDEKDGRENVRAWLRKNEAGKSIFLALYSMHTYKNDTYMNIALPLPYSNMTGILKLRNDNNDLMITSKLRR
NGKGDEGIYLHTRFFTIRLPLEETFIIKEGTNQMLEANHKMWISGVKFLEIDYEIKKIEEK
>Mature_541_residues
MKNIIVGLACYIIFLICEWPDVNPVEAIILLSILLFIPMSFCIIDKRARNGSYLLFYKSVSFLYPIAAICAMLAFVTNQY
IFAIIWFVYTGIVALFGINRLLERGWKPLEETAIDSAFIYLFLGGFWFFASVAKLSIMHFSSDIILLTAAHFHYSAFLLP
LSAGLIGRKREKSSKVYDAIMFTIAISPMTVAIGITYSRVFEFFAVCLYLCAIYGYSIYVWKAKFNAISAKILLIISSST
LMITIMFSLIYSYGNLKHVMTITIAQMVWIHGVVNGIGVALPAFVGWMIEKSVPNYKYYGKPMSRLRGKATVGEAFLHNR
NVIDSKEYKGLVYKMNDFHSGIFDRAKIPISIIRFYENTTEYGLQSHIKWTRWFRPFAFCYEKMSKRVGQIHLGMGGKWE
TMHGFIIGIMDEKDGRENVRAWLRKNEAGKSIFLALYSMHTYKNDTYMNIALPLPYSNMTGILKLRNDNNDLMITSKLRR
NGKGDEGIYLHTRFFTIRLPLEETFIIKEGTNQMLEANHKMWISGVKFLEIDYEIKKIEEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62232; Mature: 62232

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIIVGLACYIIFLICEWPDVNPVEAIILLSILLFIPMSFCIIDKRARNGSYLLFYKSV
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECH
SFLYPIAAICAMLAFVTNQYIFAIIWFVYTGIVALFGINRLLERGWKPLEETAIDSAFIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LFLGGFWFFASVAKLSIMHFSSDIILLTAAHFHYSAFLLPLSAGLIGRKREKSSKVYDAI
HHHHHHHHHHHHHHHHHHEECCCEEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
MFTIAISPMTVAIGITYSRVFEFFAVCLYLCAIYGYSIYVWKAKFNAISAKILLIISSST
HHHEEECCEEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCEEEEEEEEEEECCH
LMITIMFSLIYSYGNLKHVMTITIAQMVWIHGVVNGIGVALPAFVGWMIEKSVPNYKYYG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
KPMSRLRGKATVGEAFLHNRNVIDSKEYKGLVYKMNDFHSGIFDRAKIPISIIRFYENTT
CCHHHHCCCCHHHHHHHCCCCCCCCHHHCCEEEEECCHHCCCCCCCCCCHHHHHHHHCCH
EYGLQSHIKWTRWFRPFAFCYEKMSKRVGQIHLGMGGKWETMHGFIIGIMDEKDGRENVR
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEECEEEEEEECCCCCHHHHH
AWLRKNEAGKSIFLALYSMHTYKNDTYMNIALPLPYSNMTGILKLRNDNNDLMITSKLRR
HHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCCCEEEEHHHHC
NGKGDEGIYLHTRFFTIRLPLEETFIIKEGTNQMLEANHKMWISGVKFLEIDYEIKKIEE
CCCCCCCEEEEEEEEEEEECCCEEEEEECCCHHHHHCCCCEEECCEEEEEECCHHHHCCC
K
C
>Mature Secondary Structure
MKNIIVGLACYIIFLICEWPDVNPVEAIILLSILLFIPMSFCIIDKRARNGSYLLFYKSV
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECH
SFLYPIAAICAMLAFVTNQYIFAIIWFVYTGIVALFGINRLLERGWKPLEETAIDSAFIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LFLGGFWFFASVAKLSIMHFSSDIILLTAAHFHYSAFLLPLSAGLIGRKREKSSKVYDAI
HHHHHHHHHHHHHHHHHHEECCCEEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
MFTIAISPMTVAIGITYSRVFEFFAVCLYLCAIYGYSIYVWKAKFNAISAKILLIISSST
HHHEEECCEEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCEEEEEEEEEEECCH
LMITIMFSLIYSYGNLKHVMTITIAQMVWIHGVVNGIGVALPAFVGWMIEKSVPNYKYYG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
KPMSRLRGKATVGEAFLHNRNVIDSKEYKGLVYKMNDFHSGIFDRAKIPISIIRFYENTT
CCHHHHCCCCHHHHHHHCCCCCCCCHHHCCEEEEECCHHCCCCCCCCCCHHHHHHHHCCH
EYGLQSHIKWTRWFRPFAFCYEKMSKRVGQIHLGMGGKWETMHGFIIGIMDEKDGRENVR
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEECEEEEEEECCCCCHHHHH
AWLRKNEAGKSIFLALYSMHTYKNDTYMNIALPLPYSNMTGILKLRNDNNDLMITSKLRR
HHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCCCEEEEHHHHC
NGKGDEGIYLHTRFFTIRLPLEETFIIKEGTNQMLEANHKMWISGVKFLEIDYEIKKIEE
CCCCCCCEEEEEEEEEEEECCCEEEEEECCCHHHHHCCCCEEECCEEEEEECCHHHHCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]