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The map label for this gene is iolC1 [H]

Identifier: 227814680

GI number: 227814680

Start: 1903772

End: 1904770

Strand: Reverse

Name: iolC1 [H]

Synonym: BAMEG_2090

Alternate gene names: 227814680

Gene position: 1904770-1903772 (Counterclockwise)

Preceding gene: 227814681

Following gene: 227814679

Centisome position: 36.42

GC content: 40.84

Gene sequence:

>999_bases
ATGAATCCACTTATTTTTAAAGAAAATCGTCCATTTGACTTAATTGCAGTTGGACGTTTATGCGTTGATTTAAATGCCAA
TGAAACACAACGTCCTATGGAAGAAACAAGAACGTTTACTAAGTATGTGGGAGGTTCTCCTGCGAACATTGCGATTGGTG
CGGCGCGTCTCGGCTTACAAACGGGATTTATCGGTAAAGTGTCCGATGATCAAATGGGCCGTTTTATTACAGGGTACTTA
AAGGACAATAAGATTAATACAGACCAGATACCTATCGATTGTACAGGTGCAGTGACAGGTCTAGCATTTACAGAAATTAA
AAGCCCTGAAGATTGTAGTATTTTAATGTACCGCGACAATGTCGCAGATTTAAACCTTGATCCAACAGAGGTATCTGAGG
ACTATATTAAACAATCAAAAGCACTCTTAATTTCAGGAACAGCTTTAGCGAAAAGTCCTTCTCGCGAGGCGGTATTTCTA
GCATTAGAATATGCGCGTAAGCATGATGTAGTTGTATTTTTTGATGTGGATTACCGCCCTTATACATGGCAGTCAGAAGC
TGAAACGGCTGTGTATTACAATCTAGCGGCTGAAAAATCTGATGTCATTATTGGAACGCGTGAAGAATTCGATATGATGG
AAAAACTATTAAACTATGAAAAATCTAATGACCAAGTTACGGCTGAAAGATGGTTTTCTCATCATGCGAAAATCGTTGTA
ATTAAACATGGCGGGGATGGTTCAATCGCTTATACGAGAGACGGTCAGTCTCACCGAGGCGGTATCTTTAAAACAAAGGT
GTTAAAGACGTTTGGCGCTGGCGACTCGTATGCATCTGCGTTTATTTATGGCTTAATGCAAGGGCTTGAGATCCCTCAAG
CGATGCGATTAGGAGGCGCTTCTGCTTCAATCGTTATTTCCAAACATAGCTGTTCAGATGCAATGCCAACAAGAGCAGAG
ATTTCTGCATTCATGGAAACGGCTGAGGAATTGGTATAG

Upstream 100 bases:

>100_bases
AAGAGAGCGCTTACTTATAGATAGATAAAGAGTAATGAATAGTATATTTATAAAAATATGAACCTTATCATTCATTCATA
AAGCATGGGAGGTAGTAACA

Downstream 100 bases:

>100_bases
AAACGTTATTAATCAATAATCAAGTGAGGGCGTATCTTATGGATGCTTCTACATTACATAAAAGGGAGAGAATGAATATG
ACAGTACAAACAGCACAAAT

Product: putative iolC protein

Products: NA

Alternate protein names: 2-deoxy-5-keto-D-gluconate kinase 1; DKG kinase 1 [H]

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MNPLIFKENRPFDLIAVGRLCVDLNANETQRPMEETRTFTKYVGGSPANIAIGAARLGLQTGFIGKVSDDQMGRFITGYL
KDNKINTDQIPIDCTGAVTGLAFTEIKSPEDCSILMYRDNVADLNLDPTEVSEDYIKQSKALLISGTALAKSPSREAVFL
ALEYARKHDVVVFFDVDYRPYTWQSEAETAVYYNLAAEKSDVIIGTREEFDMMEKLLNYEKSNDQVTAERWFSHHAKIVV
IKHGGDGSIAYTRDGQSHRGGIFKTKVLKTFGAGDSYASAFIYGLMQGLEIPQAMRLGGASASIVISKHSCSDAMPTRAE
ISAFMETAEELV

Sequences:

>Translated_332_residues
MNPLIFKENRPFDLIAVGRLCVDLNANETQRPMEETRTFTKYVGGSPANIAIGAARLGLQTGFIGKVSDDQMGRFITGYL
KDNKINTDQIPIDCTGAVTGLAFTEIKSPEDCSILMYRDNVADLNLDPTEVSEDYIKQSKALLISGTALAKSPSREAVFL
ALEYARKHDVVVFFDVDYRPYTWQSEAETAVYYNLAAEKSDVIIGTREEFDMMEKLLNYEKSNDQVTAERWFSHHAKIVV
IKHGGDGSIAYTRDGQSHRGGIFKTKVLKTFGAGDSYASAFIYGLMQGLEIPQAMRLGGASASIVISKHSCSDAMPTRAE
ISAFMETAEELV
>Mature_332_residues
MNPLIFKENRPFDLIAVGRLCVDLNANETQRPMEETRTFTKYVGGSPANIAIGAARLGLQTGFIGKVSDDQMGRFITGYL
KDNKINTDQIPIDCTGAVTGLAFTEIKSPEDCSILMYRDNVADLNLDPTEVSEDYIKQSKALLISGTALAKSPSREAVFL
ALEYARKHDVVVFFDVDYRPYTWQSEAETAVYYNLAAEKSDVIIGTREEFDMMEKLLNYEKSNDQVTAERWFSHHAKIVV
IKHGGDGSIAYTRDGQSHRGGIFKTKVLKTFGAGDSYASAFIYGLMQGLEIPQAMRLGGASASIVISKHSCSDAMPTRAE
ISAFMETAEELV

Specific function: Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP) [H]

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI1790193, Length=320, Percent_Identity=25.9375, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR022841 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.92 [H]

Molecular weight: Translated: 36663; Mature: 36663

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLIFKENRPFDLIAVGRLCVDLNANETQRPMEETRTFTKYVGGSPANIAIGAARLGLQ
CCCCEECCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHC
TGFIGKVSDDQMGRFITGYLKDNKINTDQIPIDCTGAVTGLAFTEIKSPEDCSILMYRDN
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCCHHCEEEEECCCCCCCEEEEEECC
VADLNLDPTEVSEDYIKQSKALLISGTALAKSPSREAVFLALEYARKHDVVVFFDVDYRP
CCCCCCCHHHHHHHHHHCCCEEEEECCHHCCCCCCCEEEEEEEECCCCCEEEEEECCCCC
YTWQSEAETAVYYNLAAEKSDVIIGTREEFDMMEKLLNYEKSNDQVTAERWFSHHAKIVV
CCCCCCCCEEEEEEEECCCCCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEE
IKHGGDGSIAYTRDGQSHRGGIFKTKVLKTFGAGDSYASAFIYGLMQGLEIPQAMRLGGA
EEECCCCCEEEEECCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHCCCC
SASIVISKHSCSDAMPTRAEISAFMETAEELV
CEEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNPLIFKENRPFDLIAVGRLCVDLNANETQRPMEETRTFTKYVGGSPANIAIGAARLGLQ
CCCCEECCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHC
TGFIGKVSDDQMGRFITGYLKDNKINTDQIPIDCTGAVTGLAFTEIKSPEDCSILMYRDN
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCCHHCEEEEECCCCCCCEEEEEECC
VADLNLDPTEVSEDYIKQSKALLISGTALAKSPSREAVFLALEYARKHDVVVFFDVDYRP
CCCCCCCHHHHHHHHHHCCCEEEEECCHHCCCCCCCEEEEEEEECCCCCEEEEEECCCCC
YTWQSEAETAVYYNLAAEKSDVIIGTREEFDMMEKLLNYEKSNDQVTAERWFSHHAKIVV
CCCCCCCCEEEEEEEECCCCCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEE
IKHGGDGSIAYTRDGQSHRGGIFKTKVLKTFGAGDSYASAFIYGLMQGLEIPQAMRLGGA
EEECCCCCEEEEECCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHCCCC
SASIVISKHSCSDAMPTRAEISAFMETAEELV
CEEEEEEECCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA