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The map label for this gene is yxdK [H]

Identifier: 227814588

GI number: 227814588

Start: 1819323

End: 1819952

Strand: Reverse

Name: yxdK [H]

Synonym: BAMEG_1998

Alternate gene names: 227814588

Gene position: 1819952-1819323 (Counterclockwise)

Preceding gene: 227814589

Following gene: 227814586

Centisome position: 34.8

GC content: 32.7

Gene sequence:

>630_bases
ATGAATCAGTGGATTCATCAAATGAAAACACCTTTATCTGTCATAGAATTAATTACACAAGATGAAGTTGATCCACGCTT
CGAAAGTATAAATGAGGAAACAGATAGACTGAAAAAGGGGTTAGAGATGGCATTGTATGTTGCACGTTTAGAAGCATTTA
CACAAGATTTTTATGTAGAAAAAGTACAGCTATATAAAATAGTGAATGATTCTGTGCACGAACATAAACGTTTCTTTATC
CGGAATTTTGTATATCCAGAGCTTAAAGTTGAGAAAGATATTACTGTAGAAAGTGATGCGAAATGGTTACAATTTTTAAT
TGGACAAATACTATCGAATGCGATTAAATATTCATCTGGTAGTAGAGAGAAGATTAAAGTGAAAGCTTGTAAGGAAGGTA
ATACAGCCATACTTGAAATTGCTGATAACGGTGTAGGCATACCGAAGCAAGATTTACCAAGAGTATTTAAACCTTTCTTT
ACAGGAGAAAATGGCAGAGATTTTAAAGAATCAACTGGAATGGGGCTATATCTTGTATATGAAATTACGAAACAATTAGG
ACATAGTGTAGAAATCCATTCAGAAGTTGGTAAAGGTACCGTTGTACGTATTAAATTTTTTAATGTGTAA

Upstream 100 bases:

>100_bases
GCTATATCTGCTGCTCTTCAACACTTGCTTGAGGTACAATATCGCCATTATCAAAATCAGCTTCAAATACAAGAGTAAAA
ATAATGATCATTTAACTTTT

Downstream 100 bases:

>100_bases
AAATAAGTAATCTAGGCTAAAGAACTTTGGAGATAAGTTTTTTAGCCTTTTTGTATAGCGGTTATATGAAATGGTAAAAC
GTCATATTAGTATGTATAAT

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MNQWIHQMKTPLSVIELITQDEVDPRFESINEETDRLKKGLEMALYVARLEAFTQDFYVEKVQLYKIVNDSVHEHKRFFI
RNFVYPELKVEKDITVESDAKWLQFLIGQILSNAIKYSSGSREKIKVKACKEGNTAILEIADNGVGIPKQDLPRVFKPFF
TGENGRDFKESTGMGLYLVYEITKQLGHSVEIHSEVGKGTVVRIKFFNV

Sequences:

>Translated_209_residues
MNQWIHQMKTPLSVIELITQDEVDPRFESINEETDRLKKGLEMALYVARLEAFTQDFYVEKVQLYKIVNDSVHEHKRFFI
RNFVYPELKVEKDITVESDAKWLQFLIGQILSNAIKYSSGSREKIKVKACKEGNTAILEIADNGVGIPKQDLPRVFKPFF
TGENGRDFKESTGMGLYLVYEITKQLGHSVEIHSEVGKGTVVRIKFFNV
>Mature_209_residues
MNQWIHQMKTPLSVIELITQDEVDPRFESINEETDRLKKGLEMALYVARLEAFTQDFYVEKVQLYKIVNDSVHEHKRFFI
RNFVYPELKVEKDITVESDAKWLQFLIGQILSNAIKYSSGSREKIKVKACKEGNTAILEIADNGVGIPKQDLPRVFKPFF
TGENGRDFKESTGMGLYLVYEITKQLGHSVEIHSEVGKGTVVRIKFFNV

Specific function: Probable member of the two-component regulatory system yxdK/yxdJ. May activate yxdJ in response to the antibacterial protein LL-37 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI145693157, Length=216, Percent_Identity=26.3888888888889, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 24122; Mature: 24122

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQWIHQMKTPLSVIELITQDEVDPRFESINEETDRLKKGLEMALYVARLEAFTQDFYVE
CCHHHHHHHCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVQLYKIVNDSVHEHKRFFIRNFVYPELKVEKDITVESDAKWLQFLIGQILSNAIKYSSG
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
SREKIKVKACKEGNTAILEIADNGVGIPKQDLPRVFKPFFTGENGRDFKESTGMGLYLVY
CCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHH
EITKQLGHSVEIHSEVGKGTVVRIKFFNV
HHHHHHCCCEEEEHHCCCCEEEEEEEECC
>Mature Secondary Structure
MNQWIHQMKTPLSVIELITQDEVDPRFESINEETDRLKKGLEMALYVARLEAFTQDFYVE
CCHHHHHHHCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVQLYKIVNDSVHEHKRFFIRNFVYPELKVEKDITVESDAKWLQFLIGQILSNAIKYSSG
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
SREKIKVKACKEGNTAILEIADNGVGIPKQDLPRVFKPFFTGENGRDFKESTGMGLYLVY
CCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHH
EITKQLGHSVEIHSEVGKGTVVRIKFFNV
HHHHHHCCCEEEEHHCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7952181; 9384377; 8867804 [H]