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The map label for this gene is rutD [H]

Identifier: 227814449

GI number: 227814449

Start: 1683313

End: 1684176

Strand: Reverse

Name: rutD [H]

Synonym: BAMEG_1857

Alternate gene names: 227814449

Gene position: 1684176-1683313 (Counterclockwise)

Preceding gene: 227814450

Following gene: 227814446

Centisome position: 32.2

GC content: 36.92

Gene sequence:

>864_bases
ATGACTGAAAAGATATTTAAAATAAACGGGATTGATATATGTACAGAAAGCTTTGGGAATCCTAAAAACCCAGCTATTTT
ATTAATTATGGGTGCAACATGTTCAATGATTTATTGGGATGAAGAGTTTTGTGAACGATTGGCTAACAGTGGGAAATTTG
TTATTCGTTTTGATAACCGTGATGTCGGACGCTCAGTCGCATATGAACCAGGAACTTCCAATTATACCGTTACAGATATG
GCTGAAGATGCAATTGGGGTATTAGATGCTTATCATATTAATAAGGCGCATCTATTTGGTATGTCATTAGGTGGTATGAT
TGCTCAAATTGCTGCTGTAAAACATCCCGAAAGAGTTTTAACGTTAACATTACTAGCTACAAGTATCATAGGATCTGACA
ATAATACGCGCGATTTACCACCGATGGATGAAAGAATTTTAACACATCACGCAAATGGCAAGCATTTAGATTGGACAAAT
GAAAATGTTGTAGCAGAATATTTAGTTTCAGGGTCCCGTCTATTATGTGGGTCAAAACGAACATTTGATGAAATAAGAGT
CTATAATCAAGTCAAACAAGAAATGGAACGAGCTAACAATCTATTAAGCATGTTTAATCACGCTTTACTTCAAGGCGATG
ATGCATATGAAGGGGTGCTTCACTCCATACAAGCACCTACATTAGTCATTCACGGAACAGACGATACCGCGCTCCCTTTT
GAACATGGTCTCGCACTTATTGATGAAATTCCTAACTCAGTTCTATTAACCCTTGAAGGCGCAGGACATGAAAATCATCC
TGATGACTGGGAAAACATAGTTCATGCTGTTACTGAACATACAGCTAAAATAATAGATAAATAA

Upstream 100 bases:

>100_bases
TGGGGGTAATTATGTAAGAAACAAAGCAAATCTTACACACACCTTAGAGTCATTCAAAATTGTATTTTAAATTAAATTCA
AAAGAAATGGAGAGAACTCT

Downstream 100 bases:

>100_bases
CGAATAAAAGGGGCACGCCACAATTTGTGCCCCTTTTATTCGTTACATGTAAAAAAGCCCATCACTGTATCCGTATGTAT
AGTGATGGGCGATACTTATA

Product: hydrolase, alpha/beta fold family

Products: alcohol; carboxylate

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTEKIFKINGIDICTESFGNPKNPAILLIMGATCSMIYWDEEFCERLANSGKFVIRFDNRDVGRSVAYEPGTSNYTVTDM
AEDAIGVLDAYHINKAHLFGMSLGGMIAQIAAVKHPERVLTLTLLATSIIGSDNNTRDLPPMDERILTHHANGKHLDWTN
ENVVAEYLVSGSRLLCGSKRTFDEIRVYNQVKQEMERANNLLSMFNHALLQGDDAYEGVLHSIQAPTLVIHGTDDTALPF
EHGLALIDEIPNSVLLTLEGAGHENHPDDWENIVHAVTEHTAKIIDK

Sequences:

>Translated_287_residues
MTEKIFKINGIDICTESFGNPKNPAILLIMGATCSMIYWDEEFCERLANSGKFVIRFDNRDVGRSVAYEPGTSNYTVTDM
AEDAIGVLDAYHINKAHLFGMSLGGMIAQIAAVKHPERVLTLTLLATSIIGSDNNTRDLPPMDERILTHHANGKHLDWTN
ENVVAEYLVSGSRLLCGSKRTFDEIRVYNQVKQEMERANNLLSMFNHALLQGDDAYEGVLHSIQAPTLVIHGTDDTALPF
EHGLALIDEIPNSVLLTLEGAGHENHPDDWENIVHAVTEHTAKIIDK
>Mature_286_residues
TEKIFKINGIDICTESFGNPKNPAILLIMGATCSMIYWDEEFCERLANSGKFVIRFDNRDVGRSVAYEPGTSNYTVTDMA
EDAIGVLDAYHINKAHLFGMSLGGMIAQIAAVKHPERVLTLTLLATSIIGSDNNTRDLPPMDERILTHHANGKHLDWTNE
NVVAEYLVSGSRLLCGSKRTFDEIRVYNQVKQEMERANNLLSMFNHALLQGDDAYEGVLHSIQAPTLVIHGTDDTALPFE
HGLALIDEIPNSVLLTLEGAGHENHPDDWENIVHAVTEHTAKIIDK

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.1.1.1

Molecular weight: Translated: 31850; Mature: 31719

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKIFKINGIDICTESFGNPKNPAILLIMGATCSMIYWDEEFCERLANSGKFVIRFDNR
CCCCEEEECCCEEEHHHCCCCCCCEEEEEECCCEEEEEECHHHHHHHHCCCCEEEEECCC
DVGRSVAYEPGTSNYTVTDMAEDAIGVLDAYHINKAHLFGMSLGGMIAQIAAVKHPERVL
CCCCEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHCCCHHHH
TLTLLATSIIGSDNNTRDLPPMDERILTHHANGKHLDWTNENVVAEYLVSGSRLLCGSKR
HHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCC
TFDEIRVYNQVKQEMERANNLLSMFNHALLQGDDAYEGVLHSIQAPTLVIHGTDDTALPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCH
EHGLALIDEIPNSVLLTLEGAGHENHPDDWENIVHAVTEHTAKIIDK
HHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TEKIFKINGIDICTESFGNPKNPAILLIMGATCSMIYWDEEFCERLANSGKFVIRFDNR
CCCEEEECCCEEEHHHCCCCCCCEEEEEECCCEEEEEECHHHHHHHHCCCCEEEEECCC
DVGRSVAYEPGTSNYTVTDMAEDAIGVLDAYHINKAHLFGMSLGGMIAQIAAVKHPERVL
CCCCEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHCCCHHHH
TLTLLATSIIGSDNNTRDLPPMDERILTHHANGKHLDWTNENVVAEYLVSGSRLLCGSKR
HHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCC
TFDEIRVYNQVKQEMERANNLLSMFNHALLQGDDAYEGVLHSIQAPTLVIHGTDDTALPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCH
EHGLALIDEIPNSVLLTLEGAGHENHPDDWENIVHAVTEHTAKIIDK
HHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: carboxylic ester; H2O

Specific reaction: A carboxylic ester + H2O = an alcohol + a carboxylate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA