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The map label for this gene is gbpA [H]

Identifier: 227814394

GI number: 227814394

Start: 1642286

End: 1642843

Strand: Direct

Name: gbpA [H]

Synonym: BAMEG_1802

Alternate gene names: 227814394

Gene position: 1642286-1642843 (Clockwise)

Preceding gene: 227814393

Following gene: 227814395

Centisome position: 31.4

GC content: 37.99

Gene sequence:

>558_bases
ATGAATAATCGATTATTAAAACAACTACAAAACATGAAAATGAACAAGAAAAGTCTAGGAGCTGTTGCATTAACAGCCGG
AATTATTGGTACGACGCTTATTCCTCAAAACACATATGCGCATGGTTTTGTTGAAAAACCTGGCAGTCGATCTGCTTTAT
GTAGTCCAACTTATGGTGCATTAAATGTAAATTGCGGAAGTGTTATGTATGAACCACAAAGTCTGGAAGCTCCAAAAGGC
TTCCCACAAGGGGGCCCAGTTGATGGACAAATCGCTTCTGCAGGTGGTAAATTTGGTGGTATTTTAGATCAACAAACAGC
CGATCGTTGGTTTAAAAATACAATCACTGGTGGAGAAAATACATTTACTTGGAAGTATACAGCGCCTCACTTAACGAGTA
AATGGCATTACTATATTACAAAAAAAGGATGGAATCCAAATAAAGCGCTCACAAGAGCTGATTTTGAACCGATTGGAACT
GTACAACATGATGGTTCTGCAGCCTCAAATCATTTAACTCACAAAATTAATGTACCTACTGAAGTGGATATCATGTGA

Upstream 100 bases:

>100_bases
GCATAAGTAACACATACATCGATACAAGATTGTCTCTTGTTATTCTTTTACATCGAAGCCCACATTACACTACAAATTAT
AACAAAAAGGGGACAGGAAC

Downstream 100 bases:

>100_bases
TTTTAGCAGTATGGGATGTAGCTGATACAGCAAATGCATTCTATAATGTTATTGATGTTACTCTCATCAATGACGTAAAA
CCAGATACAGAAGCTCCAAG

Product: CBP21

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MNNRLLKQLQNMKMNKKSLGAVALTAGIIGTTLIPQNTYAHGFVEKPGSRSALCSPTYGALNVNCGSVMYEPQSLEAPKG
FPQGGPVDGQIASAGGKFGGILDQQTADRWFKNTITGGENTFTWKYTAPHLTSKWHYYITKKGWNPNKALTRADFEPIGT
VQHDGSAASNHLTHKINVPTEVDIM

Sequences:

>Translated_185_residues
MNNRLLKQLQNMKMNKKSLGAVALTAGIIGTTLIPQNTYAHGFVEKPGSRSALCSPTYGALNVNCGSVMYEPQSLEAPKG
FPQGGPVDGQIASAGGKFGGILDQQTADRWFKNTITGGENTFTWKYTAPHLTSKWHYYITKKGWNPNKALTRADFEPIGT
VQHDGSAASNHLTHKINVPTEVDIM
>Mature_185_residues
MNNRLLKQLQNMKMNKKSLGAVALTAGIIGTTLIPQNTYAHGFVEKPGSRSALCSPTYGALNVNCGSVMYEPQSLEAPKG
FPQGGPVDGQIASAGGKFGGILDQQTADRWFKNTITGGENTFTWKYTAPHLTSKWHYYITKKGWNPNKALTRADFEPIGT
VQHDGSAASNHLTHKINVPTEVDIM

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 20092; Mature: 20092

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRLLKQLQNMKMNKKSLGAVALTAGIIGTTLIPQNTYAHGFVEKPGSRSALCSPTYGA
CCHHHHHHHHHCCCCCHHCCHHHHHHHHHHHEECCCCCCCCCCEECCCCCCEECCCCCCE
LNVNCGSVMYEPQSLEAPKGFPQGGPVDGQIASAGGKFGGILDQQTADRWFKNTITGGEN
EEECCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCC
TFTWKYTAPHLTSKWHYYITKKGWNPNKALTRADFEPIGTVQHDGSAASNHLTHKINVPT
EEEEEEECCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCEECCCCCCCCCCEEEECCCE
EVDIM
EEECC
>Mature Secondary Structure
MNNRLLKQLQNMKMNKKSLGAVALTAGIIGTTLIPQNTYAHGFVEKPGSRSALCSPTYGA
CCHHHHHHHHHCCCCCHHCCHHHHHHHHHHHEECCCCCCCCCCEECCCCCCEECCCCCCE
LNVNCGSVMYEPQSLEAPKGFPQGGPVDGQIASAGGKFGGILDQQTADRWFKNTITGGEN
EEECCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCC
TFTWKYTAPHLTSKWHYYITKKGWNPNKALTRADFEPIGTVQHDGSAASNHLTHKINVPT
EEEEEEECCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCEECCCCCCCCCCEEEECCCE
EVDIM
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]