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The map label for this gene is dppE [H]

Identifier: 227814340

GI number: 227814340

Start: 1595568

End: 1597190

Strand: Direct

Name: dppE [H]

Synonym: BAMEG_1748

Alternate gene names: 227814340

Gene position: 1595568-1597190 (Clockwise)

Preceding gene: 227814339

Following gene: 227814341

Centisome position: 30.51

GC content: 34.07

Gene sequence:

>1623_bases
ATGAAAAAATTTGTTCGCTACTCATTATTTAGTACTCTATTCGTTTCTTCGATTTTAGTTGGCTGCGCAAAAGAAAAAAC
AACGACAAAGCCGAAAGATGAGAAGAAAGTATTACAGTTACTAGAAACGGGTGAAATTCCATCGTTACATTCAGGGAAAG
TAACAGATGCAGTATCATTTAACGTTTTAAATAACGTAATGGAAGGATTATTCCGTTTATCGAAAAATGATGAAGTGATT
GAGGCTGGAGCACAAAAATATGAAGTGAGTAAAGATGGAAAAACATATACATTCCATTTGCGTGATGCGAAATGGTCTAA
CGGAGATCCAGTAACAGCGCAAGATTACGTATATGCTTGGAAGCAGCTTATTAACCCGGATACAGCTTCTCAATATGCAT
ACATTGCGTACGATGTGAAAAATGCAGAGAAAATAAATAAGAAACAACTAGGGTTAGATGAATTAGGAGTAAAAGCAAAG
GATGATAAAACGTTCGTTGTAGAGTTAGAACATCCTGTACCATATTTTACGAAACTACTTATTTTACCGTCCTTCTATCC
AATTAACGAGAAATATGCGAAGGAGCAAGGTGATAAATATGGATTAGAAGCAAATAAAGCGGTATATAATGGGCCATTTA
CATTATCTGATTGGAAGCATGAAGCTAGTTTTACGATGAAGAAAAACGATAAGTATTGGGATAAAAAAGAAGTGAAGCTA
GATGAAGTAAACTATCAAATTGTTAAAGAAATTTCAACTGCGGTAAATTTATATGAAACAGATAAAGTTGATAGAGCTGT
CATTTCAACTGAATTCGTAGATAAATATAAAAATAATAAAGAGCTTAAACAATATACAGATCCGGTTATGTACTTCTTCC
GATTCAATGAAAATGTACCGATTCTTAAAAATAAAAATGCACGTCTTGCACTAAGTACAGTGTTTGATAAGAAAGGACTT
GCGACTTCATTTTTAAATGATGGTTCGGTCGCTGCAAACTATTACGTACCAAAAGGATTTTTAAAGGGTCCAGATAAAAA
AGATTTTAGAAGTACGGCAGGTGAATTTAATAAAACTGATGTAAAACAGGCGAAAGAATATTGGGAAAAGGCGAAGCAAG
AGACTGGTACAAATGAAGTGACGCTTGAGTTATTAAACTATGATTTAGAAAACTTCAAAAAAGTAGGAGAATATATTAAA
GAGCAGCTTGAGAAAAACTTACCGGGCTTAAAGGTAAATGTGAAATTACAACCACACACGCAAAAATTAGCGCTAGAGAA
GAAGAAAGAATATGAAATGTCGTTATCACGCTGGTTACCAGATTATCCAGATCCAATGACATACTTAGAAGTATTCCTTT
CTGGAAGTAGTGTGAACAATACAGAATATGCAAATCCGGAATATGATGCGTTAATTAAGAAGATTAAAACCGAATTAGGT
AATGATGAAAAGGCTCGCTGGAAAGCACTACAAGATGCTGAAAAAATGCTACTTGATGATGCAGTTATTGCTCCAGTATT
CCAGCGCGGATTATCTTACTTACAAAAACCATACGTGAAAGATTTATATGTACATCAATTTGGTCCAGCTACAAGTTTAA
AATGGGCAGATGTACAAAAATAA

Upstream 100 bases:

>100_bases
AAAGATCAGTAGAGATTATACCGTTAAATACACCTGGATATATAGAAGAATACGCTGGTGCTCGTCGTTACTTACCTTAA
AAAATAGAGGGGGTTTTCAA

Downstream 100 bases:

>100_bases
AGGATGAGAAAACAGACTCCACGTGTGTGGTAGTCTGTTTTTTTAGTTAAAGTCGGGTAAATAGTACATGGTATAATTTA
CTAGACTGTATAAAACTTTG

Product: putative oligopeptide ABC transporter, oligopeptide-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MKKFVRYSLFSTLFVSSILVGCAKEKTTTKPKDEKKVLQLLETGEIPSLHSGKVTDAVSFNVLNNVMEGLFRLSKNDEVI
EAGAQKYEVSKDGKTYTFHLRDAKWSNGDPVTAQDYVYAWKQLINPDTASQYAYIAYDVKNAEKINKKQLGLDELGVKAK
DDKTFVVELEHPVPYFTKLLILPSFYPINEKYAKEQGDKYGLEANKAVYNGPFTLSDWKHEASFTMKKNDKYWDKKEVKL
DEVNYQIVKEISTAVNLYETDKVDRAVISTEFVDKYKNNKELKQYTDPVMYFFRFNENVPILKNKNARLALSTVFDKKGL
ATSFLNDGSVAANYYVPKGFLKGPDKKDFRSTAGEFNKTDVKQAKEYWEKAKQETGTNEVTLELLNYDLENFKKVGEYIK
EQLEKNLPGLKVNVKLQPHTQKLALEKKKEYEMSLSRWLPDYPDPMTYLEVFLSGSSVNNTEYANPEYDALIKKIKTELG
NDEKARWKALQDAEKMLLDDAVIAPVFQRGLSYLQKPYVKDLYVHQFGPATSLKWADVQK

Sequences:

>Translated_540_residues
MKKFVRYSLFSTLFVSSILVGCAKEKTTTKPKDEKKVLQLLETGEIPSLHSGKVTDAVSFNVLNNVMEGLFRLSKNDEVI
EAGAQKYEVSKDGKTYTFHLRDAKWSNGDPVTAQDYVYAWKQLINPDTASQYAYIAYDVKNAEKINKKQLGLDELGVKAK
DDKTFVVELEHPVPYFTKLLILPSFYPINEKYAKEQGDKYGLEANKAVYNGPFTLSDWKHEASFTMKKNDKYWDKKEVKL
DEVNYQIVKEISTAVNLYETDKVDRAVISTEFVDKYKNNKELKQYTDPVMYFFRFNENVPILKNKNARLALSTVFDKKGL
ATSFLNDGSVAANYYVPKGFLKGPDKKDFRSTAGEFNKTDVKQAKEYWEKAKQETGTNEVTLELLNYDLENFKKVGEYIK
EQLEKNLPGLKVNVKLQPHTQKLALEKKKEYEMSLSRWLPDYPDPMTYLEVFLSGSSVNNTEYANPEYDALIKKIKTELG
NDEKARWKALQDAEKMLLDDAVIAPVFQRGLSYLQKPYVKDLYVHQFGPATSLKWADVQK
>Mature_540_residues
MKKFVRYSLFSTLFVSSILVGCAKEKTTTKPKDEKKVLQLLETGEIPSLHSGKVTDAVSFNVLNNVMEGLFRLSKNDEVI
EAGAQKYEVSKDGKTYTFHLRDAKWSNGDPVTAQDYVYAWKQLINPDTASQYAYIAYDVKNAEKINKKQLGLDELGVKAK
DDKTFVVELEHPVPYFTKLLILPSFYPINEKYAKEQGDKYGLEANKAVYNGPFTLSDWKHEASFTMKKNDKYWDKKEVKL
DEVNYQIVKEISTAVNLYETDKVDRAVISTEFVDKYKNNKELKQYTDPVMYFFRFNENVPILKNKNARLALSTVFDKKGL
ATSFLNDGSVAANYYVPKGFLKGPDKKDFRSTAGEFNKTDVKQAKEYWEKAKQETGTNEVTLELLNYDLENFKKVGEYIK
EQLEKNLPGLKVNVKLQPHTQKLALEKKKEYEMSLSRWLPDYPDPMTYLEVFLSGSSVNNTEYANPEYDALIKKIKTELG
NDEKARWKALQDAEKMLLDDAVIAPVFQRGLSYLQKPYVKDLYVHQFGPATSLKWADVQK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=534, Percent_Identity=29.4007490636704, Blast_Score=197, Evalue=2e-51,
Organism=Escherichia coli, GI87081878, Length=535, Percent_Identity=29.7196261682243, Blast_Score=192, Evalue=4e-50,
Organism=Escherichia coli, GI1789397, Length=533, Percent_Identity=27.9549718574109, Blast_Score=181, Evalue=1e-46,
Organism=Escherichia coli, GI1787762, Length=439, Percent_Identity=22.7790432801822, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1789966, Length=477, Percent_Identity=22.8511530398323, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 62097; Mature: 62097

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFVRYSLFSTLFVSSILVGCAKEKTTTKPKDEKKVLQLLETGEIPSLHSGKVTDAVSF
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
NVLNNVMEGLFRLSKNDEVIEAGAQKYEVSKDGKTYTFHLRDAKWSNGDPVTAQDYVYAW
HHHHHHHHHHHHCCCCCHHHHHCCHHEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHH
KQLINPDTASQYAYIAYDVKNAEKINKKQLGLDELGVKAKDDKTFVVELEHPVPYFTKLL
HHHCCCCCCCCEEEEEEECCCHHHHHHHHCCHHHHCCCCCCCCEEEEEECCCCHHHHHHH
ILPSFYPINEKYAKEQGDKYGLEANKAVYNGPFTLSDWKHEASFTMKKNDKYWDKKEVKL
HHCCCCCCCHHHHHHCCCCCCCCCCCEEECCCEECCCCCCCCCEEECCCCCCCCCCCCCH
DEVNYQIVKEISTAVNLYETDKVDRAVISTEFVDKYKNNKELKQYTDPVMYFFRFNENVP
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEECCCCC
ILKNKNARLALSTVFDKKGLATSFLNDGSVAANYYVPKGFLKGPDKKDFRSTAGEFNKTD
EEECCCCEEEEEEHHCCCCCHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCHHH
VKQAKEYWEKAKQETGTNEVTLELLNYDLENFKKVGEYIKEQLEKNLPGLKVNVKLQPHT
HHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCH
QKLALEKKKEYEMSLSRWLPDYPDPMTYLEVFLSGSSVNNTEYANPEYDALIKKIKTELG
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHC
NDEKARWKALQDAEKMLLDDAVIAPVFQRGLSYLQKPYVKDLYVHQFGPATSLKWADVQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKFVRYSLFSTLFVSSILVGCAKEKTTTKPKDEKKVLQLLETGEIPSLHSGKVTDAVSF
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
NVLNNVMEGLFRLSKNDEVIEAGAQKYEVSKDGKTYTFHLRDAKWSNGDPVTAQDYVYAW
HHHHHHHHHHHHCCCCCHHHHHCCHHEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHH
KQLINPDTASQYAYIAYDVKNAEKINKKQLGLDELGVKAKDDKTFVVELEHPVPYFTKLL
HHHCCCCCCCCEEEEEEECCCHHHHHHHHCCHHHHCCCCCCCCEEEEEECCCCHHHHHHH
ILPSFYPINEKYAKEQGDKYGLEANKAVYNGPFTLSDWKHEASFTMKKNDKYWDKKEVKL
HHCCCCCCCHHHHHHCCCCCCCCCCCEEECCCEECCCCCCCCCEEECCCCCCCCCCCCCH
DEVNYQIVKEISTAVNLYETDKVDRAVISTEFVDKYKNNKELKQYTDPVMYFFRFNENVP
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEECCCCC
ILKNKNARLALSTVFDKKGLATSFLNDGSVAANYYVPKGFLKGPDKKDFRSTAGEFNKTD
EEECCCCEEEEEEHHCCCCCHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCHHH
VKQAKEYWEKAKQETGTNEVTLELLNYDLENFKKVGEYIKEQLEKNLPGLKVNVKLQPHT
HHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCH
QKLALEKKKEYEMSLSRWLPDYPDPMTYLEVFLSGSSVNNTEYANPEYDALIKKIKTELG
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHC
NDEKARWKALQDAEKMLLDDAVIAPVFQRGLSYLQKPYVKDLYVHQFGPATSLKWADVQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]