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The map label for this gene is ykpA [H]

Identifier: 227814248

GI number: 227814248

Start: 1523317

End: 1524942

Strand: Direct

Name: ykpA [H]

Synonym: BAMEG_1656

Alternate gene names: 227814248

Gene position: 1523317-1524942 (Clockwise)

Preceding gene: 227814247

Following gene: 227814249

Centisome position: 29.13

GC content: 37.02

Gene sequence:

>1626_bases
ATGATTACAGTAAGTAACGTTAGTTTGCGTTTCGCGGATCGCAAATTGTTTGAAGGTGTTAACATAAAATTCACGCCAGG
TAACTGCTACGGTTTAATCGGAGCAAACGGTGCTGGTAAATCAACATTTCTAAAGATTTTATCTGGAGAAATCGAACCAT
CAACAGGTGACATACATATTACGCCAGGTGAGCGTCTAGCAGTATTAAAACAGAACCACTTCGAATACGAAGAGTTCCCA
GTATTAGAAACAGTAATTATGGGTCACACGCAACTTTATAAAGTAATGCAAGAGAAAAATGCCATTTACATGAAAGAAGA
CTTCAGTGATGAAGATGGTATGCGTGCTGCTGAACTTGAAGGTGAGTTCGCTGAGCTGAACGGTTGGGAAGCTGAGTCAG
AAGCTGCAATCTTACTAAAAGGACTTGGTATTGGTGAAGATCTTCATGATAAGAAATTGTCAGAATTAACTGGGGCAGAG
AAAGTAAAAGTATTACTTGCTCAAGCATTATTCGGTAAACCTGATATTCTATTACTAGATGAGCCTACCAACCACTTGGA
CTTAAAAGCGATCCAATGGTTAGAAAACTTCTTAATGAACTTTGAAAATACAGTTATCGTTGTATCCCATGACCGTCACT
TCTTAAATAAAGTATGTACGCACATGGCTGATCTTGATTTCGGTAAAATTCAACTTTATGTTGGTAACTATGACTTCTGG
CATGAGTCAAGCCAATTAGCTTTAAAATTAACGCAAGATGCTAATAAGAAAAAAGAAGAGAAAGTAAAAGAGTTACAAAA
CTTCATTGCGCGCTTTAGCTCAAACGCATCTAAAGCGAAACAAGCAACTTCTCGTAAAAAATTATTAGATAAAATTACTT
TAGATGATATTAGACCATCATCTCGTCGTTACCCATTCGTTGGCTTCACACCTGAGCGTGAAGTAGGAAATGACTTATTA
ACTGTTGAAGGTCTTTCTAAAACAATTGATGGGGAAAAAGTGTTAGATAATGTGTACTTCACTTTAAATAAAGGTGATAA
AGTTGCATTTATCGGTCGTAACGATATTGCAATGACAACATTATTTAAAATTCTTATGGGTGAAATGGAGCCAGATAGTG
GTTCATTCAAATGGGGCGTTACAACTTCTCAATCTTACTTCCCAAGAGATAACTCTAAGTACTTTGAGAACAGTGACCTC
AACTTAGTTGAATGGTTACGTCAATTCTCTCCACAAGATGAGTCAGAAAGCTTCTTACGTGGTTTCTTAGGCCGTATGTT
ATTCTCAGGTGAAGAAGTTAAGAAGAACGTTTCTGTATTATCTGGAGGCGAAAAAGTTCGTTGTATGTTATCTAAAATGA
TGTTAAGTGGTGCGAACGTAATCACACTTGACGACCCAACGAACCATTTAGACCTTGAGTCTATTACAGCACTAAACAAC
GGTTTAATCGCATTCAAAGGTACAATGTTATTCACATCTCATGACCATCAGTTCGTACAAACAATTGCAAACCGCATTAT
CGAAGTAACGCCAAACGGTGTAATCGATAAAGAGGCTACTTACGATGAGTTCTTAGAAAATGAAGAACTTCAAAAACAAG
TAGATGCAATGTACAAAGGTCAATAA

Upstream 100 bases:

>100_bases
ATAATAGCTATAGTCTACAATAATTGAGTCGTAATATGCGATTTTTTAAGACAATCGGTGAGAAAACGCTGAAATAAGCG
GTATTAGTAGGAGGACACAA

Downstream 100 bases:

>100_bases
TAAATGAGGAAAACCTCGCTCTCGTTTTGAGAGCGAGGTTTTTTTATAAACTTTATTTTATGGATTGTGAATAATTATTC
AAAAATAATTTTATTGAAGG

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MITVSNVSLRFADRKLFEGVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPSTGDIHITPGERLAVLKQNHFEYEEFP
VLETVIMGHTQLYKVMQEKNAIYMKEDFSDEDGMRAAELEGEFAELNGWEAESEAAILLKGLGIGEDLHDKKLSELTGAE
KVKVLLAQALFGKPDILLLDEPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
HESSQLALKLTQDANKKKEEKVKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIRPSSRRYPFVGFTPEREVGNDLL
TVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTTLFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSKYFENSDL
NLVEWLRQFSPQDESESFLRGFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVITLDDPTNHLDLESITALNN
GLIAFKGTMLFTSHDHQFVQTIANRIIEVTPNGVIDKEATYDEFLENEELQKQVDAMYKGQ

Sequences:

>Translated_541_residues
MITVSNVSLRFADRKLFEGVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPSTGDIHITPGERLAVLKQNHFEYEEFP
VLETVIMGHTQLYKVMQEKNAIYMKEDFSDEDGMRAAELEGEFAELNGWEAESEAAILLKGLGIGEDLHDKKLSELTGAE
KVKVLLAQALFGKPDILLLDEPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
HESSQLALKLTQDANKKKEEKVKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIRPSSRRYPFVGFTPEREVGNDLL
TVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTTLFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSKYFENSDL
NLVEWLRQFSPQDESESFLRGFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVITLDDPTNHLDLESITALNN
GLIAFKGTMLFTSHDHQFVQTIANRIIEVTPNGVIDKEATYDEFLENEELQKQVDAMYKGQ
>Mature_541_residues
MITVSNVSLRFADRKLFEGVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPSTGDIHITPGERLAVLKQNHFEYEEFP
VLETVIMGHTQLYKVMQEKNAIYMKEDFSDEDGMRAAELEGEFAELNGWEAESEAAILLKGLGIGEDLHDKKLSELTGAE
KVKVLLAQALFGKPDILLLDEPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
HESSQLALKLTQDANKKKEEKVKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIRPSSRRYPFVGFTPEREVGNDLL
TVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTTLFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSKYFENSDL
NLVEWLRQFSPQDESESFLRGFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVITLDDPTNHLDLESITALNN
GLIAFKGTMLFTSHDHQFVQTIANRIIEVTPNGVIDKEATYDEFLENEELQKQVDAMYKGQ

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=538, Percent_Identity=30.4832713754647, Blast_Score=255, Evalue=7e-68,
Organism=Homo sapiens, GI10947137, Length=517, Percent_Identity=31.3346228239845, Blast_Score=229, Evalue=5e-60,
Organism=Homo sapiens, GI27881506, Length=517, Percent_Identity=31.3346228239845, Blast_Score=229, Evalue=7e-60,
Organism=Homo sapiens, GI10947135, Length=527, Percent_Identity=27.7039848197343, Blast_Score=173, Evalue=5e-43,
Organism=Homo sapiens, GI69354671, Length=527, Percent_Identity=27.7039848197343, Blast_Score=173, Evalue=5e-43,
Organism=Homo sapiens, GI45446740, Length=282, Percent_Identity=25.177304964539, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI47078218, Length=282, Percent_Identity=25.177304964539, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI105990541, Length=204, Percent_Identity=29.9019607843137, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI21536376, Length=220, Percent_Identity=25, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI255708477, Length=210, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=6e-12,
Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=46.1393596986817, Blast_Score=526, Evalue=1e-150,
Organism=Escherichia coli, GI1789751, Length=510, Percent_Identity=33.921568627451, Blast_Score=285, Evalue=8e-78,
Organism=Escherichia coli, GI2367384, Length=533, Percent_Identity=30.5816135084428, Blast_Score=241, Evalue=1e-64,
Organism=Escherichia coli, GI1787182, Length=514, Percent_Identity=29.9610894941634, Blast_Score=211, Evalue=1e-55,
Organism=Escherichia coli, GI1790525, Length=497, Percent_Identity=22.9376257545272, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1786398, Length=261, Percent_Identity=25.6704980842912, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1787029, Length=237, Percent_Identity=29.535864978903, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786703, Length=229, Percent_Identity=30.1310043668122, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789891, Length=222, Percent_Identity=25.6756756756757, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789864, Length=221, Percent_Identity=24.8868778280543, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788225, Length=251, Percent_Identity=24.3027888446215, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1786319, Length=226, Percent_Identity=21.6814159292035, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788165, Length=216, Percent_Identity=23.1481481481481, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1788644, Length=233, Percent_Identity=26.1802575107296, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=545, Percent_Identity=29.1743119266055, Blast_Score=221, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI17555318, Length=541, Percent_Identity=27.5415896487985, Blast_Score=208, Evalue=6e-54,
Organism=Caenorhabditis elegans, GI17559834, Length=544, Percent_Identity=26.2867647058824, Blast_Score=195, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI17565586, Length=222, Percent_Identity=26.5765765765766, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17558664, Length=218, Percent_Identity=29.8165137614679, Blast_Score=79, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17565938, Length=229, Percent_Identity=27.5109170305677, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=530, Percent_Identity=33.5849056603774, Blast_Score=251, Evalue=2e-67,
Organism=Saccharomyces cerevisiae, GI6321121, Length=534, Percent_Identity=26.7790262172285, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6325030, Length=380, Percent_Identity=26.3157894736842, Blast_Score=106, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6324314, Length=370, Percent_Identity=25.1351351351351, Blast_Score=97, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6323278, Length=367, Percent_Identity=23.433242506812, Blast_Score=93, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24666836, Length=546, Percent_Identity=29.8534798534799, Blast_Score=251, Evalue=7e-67,
Organism=Drosophila melanogaster, GI24642252, Length=523, Percent_Identity=28.1070745697897, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI18859989, Length=523, Percent_Identity=28.1070745697897, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI24641342, Length=518, Percent_Identity=27.7992277992278, Blast_Score=200, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61016; Mature: 61016

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVSNVSLRFADRKLFEGVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPSTGDIHI
CEEEECEEEEEHHHHHHCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
TPGERLAVLKQNHFEYEEFPVLETVIMGHTQLYKVMQEKNAIYMKEDFSDEDGMRAAELE
CCCCEEEEEECCCCCCHHCCHHHHHHHCHHHHHHHHHHCCCEEEECCCCCCCCCEEHHCC
GEFAELNGWEAESEAAILLKGLGIGEDLHDKKLSELTGAEKVKVLLAQALFGKPDILLLD
CCHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE
EPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCC
HESSQLALKLTQDANKKKEEKVKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIRPS
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SRRYPFVGFTPEREVGNDLLTVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTT
CCCCCEECCCCCHHHCCCEEEECCHHHCCCHHHHHCCEEEEEECCCEEEEECCCCHHHHH
LFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSKYFENSDLNLVEWLRQFSPQDESESFLR
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHH
GFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVITLDDPTNHLDLESITALNN
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCC
GLIAFKGTMLFTSHDHQFVQTIANRIIEVTPNGVIDKEATYDEFLENEELQKQVDAMYKG
CEEEEEEEEEEECCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCC
Q
C
>Mature Secondary Structure
MITVSNVSLRFADRKLFEGVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPSTGDIHI
CEEEECEEEEEHHHHHHCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
TPGERLAVLKQNHFEYEEFPVLETVIMGHTQLYKVMQEKNAIYMKEDFSDEDGMRAAELE
CCCCEEEEEECCCCCCHHCCHHHHHHHCHHHHHHHHHHCCCEEEECCCCCCCCCEEHHCC
GEFAELNGWEAESEAAILLKGLGIGEDLHDKKLSELTGAEKVKVLLAQALFGKPDILLLD
CCHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE
EPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCC
HESSQLALKLTQDANKKKEEKVKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIRPS
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SRRYPFVGFTPEREVGNDLLTVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTT
CCCCCEECCCCCHHHCCCEEEECCHHHCCCHHHHHCCEEEEEECCCEEEEECCCCHHHHH
LFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSKYFENSDLNLVEWLRQFSPQDESESFLR
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHH
GFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVITLDDPTNHLDLESITALNN
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCC
GLIAFKGTMLFTSHDHQFVQTIANRIIEVTPNGVIDKEATYDEFLENEELQKQVDAMYKG
CEEEEEEEEEEECCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]