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The map label for this gene is ydgH [H]

Identifier: 227814246

GI number: 227814246

Start: 1521308

End: 1521805

Strand: Direct

Name: ydgH [H]

Synonym: BAMEG_1654

Alternate gene names: 227814246

Gene position: 1521308-1521805 (Clockwise)

Preceding gene: 227814245

Following gene: 227814247

Centisome position: 29.09

GC content: 32.93

Gene sequence:

>498_bases
ATGTTAATTGGAATTGCAATCGTATTAATCGTGATTACACGTTCATTATTAAACACAATCTTTATTATTGGATCTTTAAT
ATTAGCTTATTTTGCATCACTTGGTATAAGTGAACAAATTAGTACACACTTACTAAACGTAGATTCATTAAGCTGGAATG
TTCCATTCTTTAGCTTCATAATGATTGTCGCTTTAGGAGTGGATTATAGTATTTTTGTAATGATGAGATACAATGAGTTA
GAAGGGGAACCAGCGACGAAAATTGTAACTGCTTCTCGTCATATTGGAGGAGTTGTATTATCAGCGGCACTTATTTTAGG
TGGTACATTTGCTGCATTAATCCCTTCAGGTGTATTGGCGCTTATACAAGTAGCATCCGTTGTTGGTGTTGCATTGTTAC
TATTAGCTATTATTGTGATGCCAATATTGTTACCTGCTTTAATAGGTTTAATGAGTAAAATGAAGGATTATGCAAAGAAA
TTAAGTGAAAGGAAATAA

Upstream 100 bases:

>100_bases
CAGAATTAAATAATGCAAAAAAGCAATTGGAGGGACCACAGCTAGAAACGTTGACTTAAAAGAAGTAACTGGGCAAGATT
TCTTACGTACAGCTACAATT

Downstream 100 bases:

>100_bases
AAGAATCCCCGTTTAAAAGTAACTAGTTCAGTTATAGGAGATAAAATATAAAATAACACTCAAATTAGGGATGTAAATCA
CATATGATTTAACATCCTTT

Product: putative membrane protein, MmpL family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MLIGIAIVLIVITRSLLNTIFIIGSLILAYFASLGISEQISTHLLNVDSLSWNVPFFSFIMIVALGVDYSIFVMMRYNEL
EGEPATKIVTASRHIGGVVLSAALILGGTFAALIPSGVLALIQVASVVGVALLLLAIIVMPILLPALIGLMSKMKDYAKK
LSERK

Sequences:

>Translated_165_residues
MLIGIAIVLIVITRSLLNTIFIIGSLILAYFASLGISEQISTHLLNVDSLSWNVPFFSFIMIVALGVDYSIFVMMRYNEL
EGEPATKIVTASRHIGGVVLSAALILGGTFAALIPSGVLALIQVASVVGVALLLLAIIVMPILLPALIGLMSKMKDYAKK
LSERK
>Mature_165_residues
MLIGIAIVLIVITRSLLNTIFIIGSLILAYFASLGISEQISTHLLNVDSLSWNVPFFSFIMIVALGVDYSIFVMMRYNEL
EGEPATKIVTASRHIGGVVLSAALILGGTFAALIPSGVLALIQVASVVGVALLLLAIIVMPILLPALIGLMSKMKDYAKK
LSERK

Specific function: Unknown

COG id: COG2409

COG function: function code R; Predicted drug exporters of the RND superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004869
- InterPro:   IPR000731 [H]

Pfam domain/function: PF03176 MMPL [H]

EC number: NA

Molecular weight: Translated: 17642; Mature: 17642

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIGIAIVLIVITRSLLNTIFIIGSLILAYFASLGISEQISTHLLNVDSLSWNVPFFSFI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHH
MIVALGVDYSIFVMMRYNELEGEPATKIVTASRHIGGVVLSAALILGGTFAALIPSGVLA
HHHHHCCCHHHHHEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIQVASVVGVALLLLAIIVMPILLPALIGLMSKMKDYAKKLSERK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLIGIAIVLIVITRSLLNTIFIIGSLILAYFASLGISEQISTHLLNVDSLSWNVPFFSFI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHH
MIVALGVDYSIFVMMRYNELEGEPATKIVTASRHIGGVVLSAALILGGTFAALIPSGVLA
HHHHHCCCHHHHHEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIQVASVVGVALLLLAIIVMPILLPALIGLMSKMKDYAKKLSERK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]