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The map label for this gene is yezC [H]

Identifier: 227814000

GI number: 227814000

Start: 1286861

End: 1287301

Strand: Reverse

Name: yezC [H]

Synonym: BAMEG_1407

Alternate gene names: 227814000

Gene position: 1287301-1286861 (Counterclockwise)

Preceding gene: 227814011

Following gene: 227813997

Centisome position: 24.61

GC content: 34.24

Gene sequence:

>441_bases
ATGCAAAACGCAGTAAAATTAGATGAAATCGATCATAAAATTATGAACTTGTTGTATGAAAATGCGAGAATTTCTGTTTC
AGAAATAGGACGAATTATATCCATGACGCAACCGGCTGTAAAGGAGCGTATAAATAAACTTGAAGATCAAGGGGTCATAG
CAGCTTACCGAACGAAATTTGAGCCTTCCAAAATTAATAAAAATATTCAAGCATTCATCATGTTTAAAACGAGCCAATGC
TCTGATTTTATCCAATATTGTAATGCCGCTCCTGAAGTAACTGATTTATATCGAATTAGTGGGGAGTTTAATTATATGAT
GAAGGTCATGAGCGATTCGATGGATTCCCTCGCTGCATTTTTAGACTCTTTAATGCAATTCGGATTATCATCTCCTTTAA
TTGTTTTAAAGAGTGAGTTTGAAGAGAAATTGTCGTTCTAA

Upstream 100 bases:

>100_bases
TTTTAAAATATAGATTTATAGGTAATTTAGTTCATTCACTTATGATATTATAGTTATAATTTGTGATTCACTTTAAAAAA
TAAAATAAGGAGGCTATACA

Downstream 100 bases:

>100_bases
TAAAGTGATAGGCACCAGCTTTCCAAAAAAGAAAAAGGGAGTGGATTATCCACTCCCTTTAACCACCTACCCCTGATTTC
TCTGCGCCTCTCTAAACTCT

Product: transcriptional regulator, AsnC family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MQNAVKLDEIDHKIMNLLYENARISVSEIGRIISMTQPAVKERINKLEDQGVIAAYRTKFEPSKINKNIQAFIMFKTSQC
SDFIQYCNAAPEVTDLYRISGEFNYMMKVMSDSMDSLAAFLDSLMQFGLSSPLIVLKSEFEEKLSF

Sequences:

>Translated_146_residues
MQNAVKLDEIDHKIMNLLYENARISVSEIGRIISMTQPAVKERINKLEDQGVIAAYRTKFEPSKINKNIQAFIMFKTSQC
SDFIQYCNAAPEVTDLYRISGEFNYMMKVMSDSMDSLAAFLDSLMQFGLSSPLIVLKSEFEEKLSF
>Mature_146_residues
MQNAVKLDEIDHKIMNLLYENARISVSEIGRIISMTQPAVKERINKLEDQGVIAAYRTKFEPSKINKNIQAFIMFKTSQC
SDFIQYCNAAPEVTDLYRISGEFNYMMKVMSDSMDSLAAFLDSLMQFGLSSPLIVLKSEFEEKLSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=124, Percent_Identity=28.2258064516129, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR000835
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16699; Mature: 16699

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNAVKLDEIDHKIMNLLYENARISVSEIGRIISMTQPAVKERINKLEDQGVIAAYRTKF
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCC
EPSKINKNIQAFIMFKTSQCSDFIQYCNAAPEVTDLYRISGEFNYMMKVMSDSMDSLAAF
CHHHHCCCEEEEEEEECHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHH
LDSLMQFGLSSPLIVLKSEFEEKLSF
HHHHHHHCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MQNAVKLDEIDHKIMNLLYENARISVSEIGRIISMTQPAVKERINKLEDQGVIAAYRTKF
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCC
EPSKINKNIQAFIMFKTSQCSDFIQYCNAAPEVTDLYRISGEFNYMMKVMSDSMDSLAAF
CHHHHCCCEEEEEEEECHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHH
LDSLMQFGLSSPLIVLKSEFEEKLSF
HHHHHHHCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]