| Definition | Bacillus anthracis str. CDC 684, complete genome. |
|---|---|
| Accession | NC_012581 |
| Length | 5,230,115 |
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The map label for this gene is colA [H]
Identifier: 227813916
GI number: 227813916
Start: 1199951
End: 1202833
Strand: Direct
Name: colA [H]
Synonym: BAMEG_1322
Alternate gene names: 227813916
Gene position: 1199951-1202833 (Clockwise)
Preceding gene: 227813915
Following gene: 227813917
Centisome position: 22.94
GC content: 33.26
Gene sequence:
>2883_bases ATGAACAAGAACTTAAAATTTACTCAAATGATGATTGGGATTAGTACGATGGCATTATCATTTGGAAGTATTCAAACACA CGTATCAGCAGAAGAAACAGCATCCTATAATATCTTACAGATGAAACCAATAGGGACAGAAACTTCAAAAGATGAAATTG TACATGCTACAAAAGCGGACGAAACTTTGACTTTTGAAGAGCGTTTAAAAGTAGGAGATTTTTCACAACGTCCTACCCTG GTTATGGAACGTGATGAAATTCAATTAAAGCAAAGCTACACTCTGGCAGAACTGAATAAAATGCCTAATAGCGAACTCAT TGATACATTATCAAAAATTTCTTGGAATCAAATTACGGATTTATTTCAATTCAATCAAGATACGAAAGCATTTTATCAGA ATAAAGAGCGCATGAACGTTATCATTAATGAATTAGGACAAAGAGGAAGGACGTTTACGAAAGAAAACTCAAAGGGCATT GAAACATTTGTTGAAGTATTACGTTCTGCTTTTTATGTGGGATATTATAATAATGAATTAAGTTACTTAAAAGAGAGAAG CTTCCATGAAAAATGTTTACCAGCATTGAAAGCGATTGCGAAAAATCCAAACTTTACATTAGGTACAGCTGAGCAAGATA GAGTAGTAGCTGCGTATGGAAAATTAATTGGTAATGCCTCTAGTGATACTGAAACAGTACAGTATGCGGTAAATGTTTTA AAACAATATAATGATAATCTTACTACGTATGTAAGCGATTATGCGAAAGGACAAGCTGTATATGAAATTGTAAAAGGAAT TGATTATGATATACAGTCTTATTTGCAAGATACGAATAAGCAACCTAATGAAACAATGTGGTATGGAAAGATTGATAACT TTATAAATGAGGTTAATAGAATTGCTCTCGTGGGGAATATAACAAATGAAAATAGTTGGCTAATTAATAATGGCATTTAT TATGCAGGTCGTTTAGGGAAATTTCATAGTAATCCATACAAAGGATTGGAAGTTATTACACAAGCAATGAGCTTGTATCC TCGTCTAAGTGGACCTTATTTTGTAGCAGTAGAACAAATTAAAACAAACTATGGTGGAAAAGATTATAGTGGAAAGGCAG TAGATCTACAGAAAATACGTGAAGAAGGGAAACGACAATACTTACCTAAAACATATACATTTGATGACGGATCAATTGTC TTCAAGACGGGAGATAAAGTAACAGAAGAAAAAATTAAGAGATTATATTGGGCAGCCAAAGAAGTAAAAGCGCAATATCA CCGTGTAATTGGTAATGATAAAGCACTAGAACCGGGTAACGCTGATGATGTACTAACAATAGTAATTTATAATAATCCAG ATGAATATCAATTAAATAGACAATTATATGGATATGAAACAAACAACGGTGGAATTTATATTGAAGAGAAGAGGACCTTC TTTACATATGAGCGTACGCCAAAGCAGAGTATTTATAGTTTAGAAGAGTTATTCCGTCATGAATTCACTCATTATTTACA AGGAAGGTATGAGGTTCCTGGTTTATTTGGAAGCGGAGAAATGTATCAAAATGAACGATTAACTTGGTTCCAAGAAGGGA ATGCAGAATTTTTTGCAGGATCTACACGTACAAATAATGTTGTTCCACGTAAAAGTATGATAAGTGGCTTATCATCTGAT CCAGCAAGCCGTTATACAGCAAAGCAAACTTTGTTCTCAAAATATGGATCATGGGACTTTTATAAGTATTCCTTTGCACT ACAGTCATATTTGTATAATCATCAATTTGACACATTTGATAAGCTTCAAGATTTAATCCGTGTAAACGATGTGAAAAATT ATGACTCATATCGTGAATCATTGAGCAACAATACACAATTGAATGCAGAATATCAAGCGTATATGCAGCAGTTGATTGAT AATCAAGATAAATATAATGTACCGCAAGTAACAAATGATTATTTAATTCAACACGCACCAAAGCCGTTAGCTGAAGTGAA AAACGAAATTGTGGATGTAGCAAATATAAAAGATGCAAAAATTACAAAATATGAGTCGCAATTCTTTAATACATTTACCG TGGAAGGCAAGTACACAGGTGGTACATCAAAAGGTGAGTCTGAAGATTGGAAAACGATGAGTAAACAAGTAAATCGAACT TTGGAGCAGTTATCCCAAAAAGGTTGGAGTGGTTATAAAACAGTTACAGCCTATTTTGTAAACTATCGTGTGAATGCAGC TAACCAGTTTGAATATGATATTGTTTTTCATGGTGTTGCAACAGAGGAAAAGGAAAAAACAAATACTATAGTAAATATGA ATGGACCATACAGCGGGATAGTAAATGAAGAGATTCAATTTCATAGCGATGGTACAAAAAGTGAAAATGGAAAAGTTACT TCTTATCTATGGAACTTTGGAGATGGTACAACAAGTACAGAAGCAAATCCTACCCATGTATATGAAGAAAAAGGAACATA CACTGTGGAACTAACTGTGAAAGATCGTAGAGGAAAAGAAAGCAAAGAACAAACAAAAGTTACTGTAAAACAAGATCCGC AAACAGGTGAATTCCATGAAGAGGAGAAGGTACTCCTGTTTAATACGCTTGTAAAAGGAAATCTGGTTACTCCTGATCAA ACAGATGTTTATACGTTTGATGTTACAGATACAAAAGAAGTAGATATTTCTGTGGTAAATGAACAAAATATTGGGATGAC ATGGGTACTTTATCATGAATCAGACATGCAAAATTATGTAGCTTGTGGTGAAGATGAAGGAAATGTTATAAAGGGGAAAT TCGAAGCGAAACCAGGCAAATATTATTTGAATGTTTATAAATTCGATGATAAAAATGGTGAATATTCATTATTGGTAAAA TAA
Upstream 100 bases:
>100_bases GGAAATTCATGTAATAAAATATGAAATGATACATATTATAATGATTTATTAAGATAAAGTGTTATATTTTTGGGTGGAAT ATATAAGTGGAGGAAATGTA
Downstream 100 bases:
>100_bases ATTCATTTCCTATATGTATACAAGGGTTGTATTTCAGGAGGAGTCTGTCACGATAGGCTGCTCCTATTTTTTCTCAAGTA TTAGTTCTATAAATTGTTTA
Product: putative microbial collagenase
Products: NA
Alternate protein names: 120 kDa collagenase [H]
Number of amino acids: Translated: 960; Mature: 960
Protein sequence:
>960_residues MNKNLKFTQMMIGISTMALSFGSIQTHVSAEETASYNILQMKPIGTETSKDEIVHATKADETLTFEERLKVGDFSQRPTL VMERDEIQLKQSYTLAELNKMPNSELIDTLSKISWNQITDLFQFNQDTKAFYQNKERMNVIINELGQRGRTFTKENSKGI ETFVEVLRSAFYVGYYNNELSYLKERSFHEKCLPALKAIAKNPNFTLGTAEQDRVVAAYGKLIGNASSDTETVQYAVNVL KQYNDNLTTYVSDYAKGQAVYEIVKGIDYDIQSYLQDTNKQPNETMWYGKIDNFINEVNRIALVGNITNENSWLINNGIY YAGRLGKFHSNPYKGLEVITQAMSLYPRLSGPYFVAVEQIKTNYGGKDYSGKAVDLQKIREEGKRQYLPKTYTFDDGSIV FKTGDKVTEEKIKRLYWAAKEVKAQYHRVIGNDKALEPGNADDVLTIVIYNNPDEYQLNRQLYGYETNNGGIYIEEKRTF FTYERTPKQSIYSLEELFRHEFTHYLQGRYEVPGLFGSGEMYQNERLTWFQEGNAEFFAGSTRTNNVVPRKSMISGLSSD PASRYTAKQTLFSKYGSWDFYKYSFALQSYLYNHQFDTFDKLQDLIRVNDVKNYDSYRESLSNNTQLNAEYQAYMQQLID NQDKYNVPQVTNDYLIQHAPKPLAEVKNEIVDVANIKDAKITKYESQFFNTFTVEGKYTGGTSKGESEDWKTMSKQVNRT LEQLSQKGWSGYKTVTAYFVNYRVNAANQFEYDIVFHGVATEEKEKTNTIVNMNGPYSGIVNEEIQFHSDGTKSENGKVT SYLWNFGDGTTSTEANPTHVYEEKGTYTVELTVKDRRGKESKEQTKVTVKQDPQTGEFHEEEKVLLFNTLVKGNLVTPDQ TDVYTFDVTDTKEVDISVVNEQNIGMTWVLYHESDMQNYVACGEDEGNVIKGKFEAKPGKYYLNVYKFDDKNGEYSLLVK
Sequences:
>Translated_960_residues MNKNLKFTQMMIGISTMALSFGSIQTHVSAEETASYNILQMKPIGTETSKDEIVHATKADETLTFEERLKVGDFSQRPTL VMERDEIQLKQSYTLAELNKMPNSELIDTLSKISWNQITDLFQFNQDTKAFYQNKERMNVIINELGQRGRTFTKENSKGI ETFVEVLRSAFYVGYYNNELSYLKERSFHEKCLPALKAIAKNPNFTLGTAEQDRVVAAYGKLIGNASSDTETVQYAVNVL KQYNDNLTTYVSDYAKGQAVYEIVKGIDYDIQSYLQDTNKQPNETMWYGKIDNFINEVNRIALVGNITNENSWLINNGIY YAGRLGKFHSNPYKGLEVITQAMSLYPRLSGPYFVAVEQIKTNYGGKDYSGKAVDLQKIREEGKRQYLPKTYTFDDGSIV FKTGDKVTEEKIKRLYWAAKEVKAQYHRVIGNDKALEPGNADDVLTIVIYNNPDEYQLNRQLYGYETNNGGIYIEEKRTF FTYERTPKQSIYSLEELFRHEFTHYLQGRYEVPGLFGSGEMYQNERLTWFQEGNAEFFAGSTRTNNVVPRKSMISGLSSD PASRYTAKQTLFSKYGSWDFYKYSFALQSYLYNHQFDTFDKLQDLIRVNDVKNYDSYRESLSNNTQLNAEYQAYMQQLID NQDKYNVPQVTNDYLIQHAPKPLAEVKNEIVDVANIKDAKITKYESQFFNTFTVEGKYTGGTSKGESEDWKTMSKQVNRT LEQLSQKGWSGYKTVTAYFVNYRVNAANQFEYDIVFHGVATEEKEKTNTIVNMNGPYSGIVNEEIQFHSDGTKSENGKVT SYLWNFGDGTTSTEANPTHVYEEKGTYTVELTVKDRRGKESKEQTKVTVKQDPQTGEFHEEEKVLLFNTLVKGNLVTPDQ TDVYTFDVTDTKEVDISVVNEQNIGMTWVLYHESDMQNYVACGEDEGNVIKGKFEAKPGKYYLNVYKFDDKNGEYSLLVK >Mature_960_residues MNKNLKFTQMMIGISTMALSFGSIQTHVSAEETASYNILQMKPIGTETSKDEIVHATKADETLTFEERLKVGDFSQRPTL VMERDEIQLKQSYTLAELNKMPNSELIDTLSKISWNQITDLFQFNQDTKAFYQNKERMNVIINELGQRGRTFTKENSKGI ETFVEVLRSAFYVGYYNNELSYLKERSFHEKCLPALKAIAKNPNFTLGTAEQDRVVAAYGKLIGNASSDTETVQYAVNVL KQYNDNLTTYVSDYAKGQAVYEIVKGIDYDIQSYLQDTNKQPNETMWYGKIDNFINEVNRIALVGNITNENSWLINNGIY YAGRLGKFHSNPYKGLEVITQAMSLYPRLSGPYFVAVEQIKTNYGGKDYSGKAVDLQKIREEGKRQYLPKTYTFDDGSIV FKTGDKVTEEKIKRLYWAAKEVKAQYHRVIGNDKALEPGNADDVLTIVIYNNPDEYQLNRQLYGYETNNGGIYIEEKRTF FTYERTPKQSIYSLEELFRHEFTHYLQGRYEVPGLFGSGEMYQNERLTWFQEGNAEFFAGSTRTNNVVPRKSMISGLSSD PASRYTAKQTLFSKYGSWDFYKYSFALQSYLYNHQFDTFDKLQDLIRVNDVKNYDSYRESLSNNTQLNAEYQAYMQQLID NQDKYNVPQVTNDYLIQHAPKPLAEVKNEIVDVANIKDAKITKYESQFFNTFTVEGKYTGGTSKGESEDWKTMSKQVNRT LEQLSQKGWSGYKTVTAYFVNYRVNAANQFEYDIVFHGVATEEKEKTNTIVNMNGPYSGIVNEEIQFHSDGTKSENGKVT SYLWNFGDGTTSTEANPTHVYEEKGTYTVELTVKDRRGKESKEQTKVTVKQDPQTGEFHEEEKVLLFNTLVKGNLVTPDQ TDVYTFDVTDTKEVDISVVNEQNIGMTWVLYHESDMQNYVACGEDEGNVIKGKFEAKPGKYYLNVYKFDDKNGEYSLLVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PKD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013510 - InterPro: IPR007280 - InterPro: IPR002169 - InterPro: IPR013661 - InterPro: IPR022409 - InterPro: IPR000601 [H]
Pfam domain/function: PF01752 Peptidase_M9; PF08453 Peptidase_M9_N; PF00801 PKD; PF04151 PPC [H]
EC number: =3.4.24.3 [H]
Molecular weight: Translated: 110366; Mature: 110366
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS50093 PKD ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNLKFTQMMIGISTMALSFGSIQTHVSAEETASYNILQMKPIGTETSKDEIVHATKAD CCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHCCEEEEEEECCCCCCCCCCEEEECCCC ETLTFEERLKVGDFSQRPTLVMERDEIQLKQSYTLAELNKMPNSELIDTLSKISWNQITD CEEEHHHHHCCCCCCCCCCEEEECCHHHHHHCCCHHHHHCCCCHHHHHHHHHCCHHHHHH LFQFNQDTKAFYQNKERMNVIINELGQRGRTFTKENSKGIETFVEVLRSAFYVGYYNNEL HHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCHH SYLKERSFHEKCLPALKAIAKNPNFTLGTAEQDRVVAAYGKLIGNASSDTETVQYAVNVL HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH KQYNDNLTTYVSDYAKGQAVYEIVKGIDYDIQSYLQDTNKQPNETMWYGKIDNFINEVNR HHHCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCE IALVGNITNENSWLINNGIYYAGRLGKFHSNPYKGLEVITQAMSLYPRLSGPYFVAVEQI EEEEEEECCCCCEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEH KTNYGGKDYSGKAVDLQKIREEGKRQYLPKTYTFDDGSIVFKTGDKVTEEKIKRLYWAAK HHCCCCCCCCCCEEHHHHHHHHHHHHCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHH EVKAQYHRVIGNDKALEPGNADDVLTIVIYNNPDEYQLNRQLYGYETNNGGIYIEEKRTF HHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEECCEEEEEEECCCCEEEEECCEE FTYERTPKQSIYSLEELFRHEFTHYLQGRYEVPGLFGSGEMYQNERLTWFQEGNAEFFAG EEECCCCHHHHHHHHHHHHHHHHHHHCCCEECCCEECCCCCCCCCCEEEEECCCCEEEEC STRTNNVVPRKSMISGLSSDPASRYTAKQTLFSKYGSWDFYKYSFALQSYLYNHQFDTFD CCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCHHH KLQDLIRVNDVKNYDSYRESLSNNTQLNAEYQAYMQQLIDNQDKYNVPQVTNDYLIQHAP HHHHHHHHHCCCCHHHHHHHHCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCC KPLAEVKNEIVDVANIKDAKITKYESQFFNTFTVEGKYTGGTSKGESEDWKTMSKQVNRT CCHHHHHHHHEECCCCCCCCEEHHHHHHCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHH LEQLSQKGWSGYKTVTAYFVNYRVNAANQFEYDIVFHGVATEEKEKTNTIVNMNGPYSGI HHHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCCC VNEEIQFHSDGTKSENGKVTSYLWNFGDGTTSTEANPTHVYEEKGTYTVELTVKDRRGKE CCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCC SKEQTKVTVKQDPQTGEFHEEEKVLLFNTLVKGNLVTPDQTDVYTFDVTDTKEVDISVVN CHHHCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEEC EQNIGMTWVLYHESDMQNYVACGEDEGNVIKGKFEAKPGKYYLNVYKFDDKNGEYSLLVK CCCCCEEEEEEECCCCCHHEECCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCEEEEEC >Mature Secondary Structure MNKNLKFTQMMIGISTMALSFGSIQTHVSAEETASYNILQMKPIGTETSKDEIVHATKAD CCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHCCEEEEEEECCCCCCCCCCEEEECCCC ETLTFEERLKVGDFSQRPTLVMERDEIQLKQSYTLAELNKMPNSELIDTLSKISWNQITD CEEEHHHHHCCCCCCCCCCEEEECCHHHHHHCCCHHHHHCCCCHHHHHHHHHCCHHHHHH LFQFNQDTKAFYQNKERMNVIINELGQRGRTFTKENSKGIETFVEVLRSAFYVGYYNNEL HHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCHH SYLKERSFHEKCLPALKAIAKNPNFTLGTAEQDRVVAAYGKLIGNASSDTETVQYAVNVL HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH KQYNDNLTTYVSDYAKGQAVYEIVKGIDYDIQSYLQDTNKQPNETMWYGKIDNFINEVNR HHHCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCE IALVGNITNENSWLINNGIYYAGRLGKFHSNPYKGLEVITQAMSLYPRLSGPYFVAVEQI EEEEEEECCCCCEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEH KTNYGGKDYSGKAVDLQKIREEGKRQYLPKTYTFDDGSIVFKTGDKVTEEKIKRLYWAAK HHCCCCCCCCCCEEHHHHHHHHHHHHCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHH EVKAQYHRVIGNDKALEPGNADDVLTIVIYNNPDEYQLNRQLYGYETNNGGIYIEEKRTF HHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEECCEEEEEEECCCCEEEEECCEE FTYERTPKQSIYSLEELFRHEFTHYLQGRYEVPGLFGSGEMYQNERLTWFQEGNAEFFAG EEECCCCHHHHHHHHHHHHHHHHHHHCCCEECCCEECCCCCCCCCCEEEEECCCCEEEEC STRTNNVVPRKSMISGLSSDPASRYTAKQTLFSKYGSWDFYKYSFALQSYLYNHQFDTFD CCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCHHH KLQDLIRVNDVKNYDSYRESLSNNTQLNAEYQAYMQQLIDNQDKYNVPQVTNDYLIQHAP HHHHHHHHHCCCCHHHHHHHHCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCC KPLAEVKNEIVDVANIKDAKITKYESQFFNTFTVEGKYTGGTSKGESEDWKTMSKQVNRT CCHHHHHHHHEECCCCCCCCEEHHHHHHCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHH LEQLSQKGWSGYKTVTAYFVNYRVNAANQFEYDIVFHGVATEEKEKTNTIVNMNGPYSGI HHHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCCC VNEEIQFHSDGTKSENGKVTSYLWNFGDGTTSTEANPTHVYEEKGTYTVELTVKDRRGKE CCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCC SKEQTKVTVKQDPQTGEFHEEEKVLLFNTLVKGNLVTPDQTDVYTFDVTDTKEVDISVVN CHHHCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEEC EQNIGMTWVLYHESDMQNYVACGEDEGNVIKGKFEAKPGKYYLNVYKFDDKNGEYSLLVK CCCCCEEEEEEECCCCCHHEECCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8282691; 11792842 [H]