Click here to switch to the map view.

The map label for this gene is yvaD [H]

Identifier: 227813868

GI number: 227813868

Start: 1153594

End: 1153983

Strand: Direct

Name: yvaD [H]

Synonym: BAMEG_1274

Alternate gene names: 227813868

Gene position: 1153594-1153983 (Clockwise)

Preceding gene: 227813867

Following gene: 227813871

Centisome position: 22.06

GC content: 30.26

Gene sequence:

>390_bases
TTGAATCGATTAAAGTATTTTTTCCTTATTACTGATGTTGGGTTTGTTATATATTGGCTCATAACAATTTTTCATATAAT
TCCGCAAGAATATTTGTTTAAAGATTACGAAGATCCTATTTTAGTAGCATGGAATTGGTCTTTTTTGCCTCTAGATTTGT
TAATCTCGTTAACGGGATTTCTAAGTTTATATTTACATTCTAAACAAAAACATATTTGGAGCCACTTTGCATTCCTATCA
TTAATTTTAACTTTTTGCTCAGGGTTACAAGCTCTAGCATTTTGGACAATCCGTTTAGATTTTGATATGTCTTGGTGGAT
CCCTAATTTATATTTATTAGTTTACCCATGCTTCTTTTTAAAAAGTGTTTGGAGAGTGTGGATGGTATGA

Upstream 100 bases:

>100_bases
TAGTAGCAATTCTTTTTATTTTAATTGGAGTCGTAATTTTAAATTTTAATAGTACGGCACATGAAGCGAAGAAAAAAGAA
ATGGTGGAGGAACGTATACA

Downstream 100 bases:

>100_bases
GATTAACGCGAGAAAAGAATTCATGTAATATAGATAAAATTTTAAGCACATTCGAATTTTAGATTCTACAACATTTTAGC
TTCTAGATCAGTTTTTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MNRLKYFFLITDVGFVIYWLITIFHIIPQEYLFKDYEDPILVAWNWSFLPLDLLISLTGFLSLYLHSKQKHIWSHFAFLS
LILTFCSGLQALAFWTIRLDFDMSWWIPNLYLLVYPCFFLKSVWRVWMV

Sequences:

>Translated_129_residues
MNRLKYFFLITDVGFVIYWLITIFHIIPQEYLFKDYEDPILVAWNWSFLPLDLLISLTGFLSLYLHSKQKHIWSHFAFLS
LILTFCSGLQALAFWTIRLDFDMSWWIPNLYLLVYPCFFLKSVWRVWMV
>Mature_129_residues
MNRLKYFFLITDVGFVIYWLITIFHIIPQEYLFKDYEDPILVAWNWSFLPLDLLISLTGFLSLYLHSKQKHIWSHFAFLS
LILTFCSGLQALAFWTIRLDFDMSWWIPNLYLLVYPCFFLKSVWRVWMV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020348
- ProDom:   PD082409 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15715; Mature: 15715

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLKYFFLITDVGFVIYWLITIFHIIPQEYLFKDYEDPILVAWNWSFLPLDLLISLTGF
CCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
LSLYLHSKQKHIWSHFAFLSLILTFCSGLQALAFWTIRLDFDMSWWIPNLYLLVYPCFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHH
KSVWRVWMV
HHHHHHHCC
>Mature Secondary Structure
MNRLKYFFLITDVGFVIYWLITIFHIIPQEYLFKDYEDPILVAWNWSFLPLDLLISLTGF
CCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
LSLYLHSKQKHIWSHFAFLSLILTFCSGLQALAFWTIRLDFDMSWWIPNLYLLVYPCFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHH
KSVWRVWMV
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]