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The map label for this gene is ykgB [H]

Identifier: 227813796

GI number: 227813796

Start: 1089753

End: 1090820

Strand: Direct

Name: ykgB [H]

Synonym: BAMEG_1200

Alternate gene names: 227813796

Gene position: 1089753-1090820 (Clockwise)

Preceding gene: 227813795

Following gene: 227813798

Centisome position: 20.84

GC content: 35.49

Gene sequence:

>1068_bases
ATGAAAATGAAGGATAATAAAGAGTTTATTGGATATGTTGGAACATACACGAAAGAAAATAGTGAAGGAATATATAAGTT
TACGTTAGACACGGAAGCAAAGAAAATTAGTAATGTAACACTTGCAGCCAAGTTGGATAACCCTACATATGTAACGATTA
ATCGAAATAATGAATATCTCTACTCTGTTGTTAAGGAAGGCGAATCTGGTGGTGTAGCTGCTTATTCAATTAATAGTAAA
ACTGGAGAGCTAACAGAAGAAAACAGACAAGTAGTAGAAGGGGCTTCCCCTTGTCATGTGAGTGTTGATAGTAGAAATCA
TACGGTAGTTACAGCAAATTACCATAAAGGAACGATTGAGTCTTTTGTAGTTAATGAAGAAGATGGAACTGTAAGTCCTG
CGGCATCGATTATGGCACATGAAGGTTCAGGTCCGAATAAAGAAAGACAAGAAAAACCACATGCACATTACGCGGGATAT
ACTCCTGATGAAAAATATGTAGTGGGTGTTGATTTAGGGATAGATAAAATAATTACGTATGAAATAAAAGATAGTGTATT
AACAGAAGTGAATCGTTTATCTGTAAATCCAGGGAGTGGTCCGAGACATATTACTTTTCATCCAAATGGAAAGTATGCGT
ATGTGATGACGGAGCTTAGTTCAGAAGTTATTGTGTTAACATATAATCCGGCAGAAGGACCATTTACAGAATTACAGTAT
ATTTCTACCATTCCTAAAGCATTTGATGAAAATAATCAAGGAAGTGCGATTCATATTTCTTCTGATGGTCGCTTTGTATA
TGCAGGTAATCGTGGTCATAATAGTATTGCTGTTTTCAGTGTAGATGAAAATTCAGGCAAGCTTACATTTGTTGCACATA
CATCTACAGAAGGAAATTGGCCAAGAGACTTTGTATTAGATCCTACTGAAAAGTTTCTTGTTGCTACAAATGAAAAATCA
CATAATCTTGTGCTATTTTCAAGAAGTGAATCTACAGGTGAGCTAACTCTTTTACAATCTGATGTTGCTGTGCCAGAGCC
TGTTTGTGTGAAGTTTTTGAACGTTTAA

Upstream 100 bases:

>100_bases
TGGTAACGTATAAAGAGGTACTCCAATTTTTTTAGGATACTCTTTCAACATAAAATATGTTAAGAAGTATGATGAACGAA
AAATATAGGGAGAGAGGGTT

Downstream 100 bases:

>100_bases
TTTAAGTTTTCATTTCATATAGCAGTGTCGTTATTTGTCGGTAAGTCGATATCCTTTGTCGAAACGTCGATATATTAAAA
TAATCGTTGATATAATTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKMKDNKEFIGYVGTYTKENSEGIYKFTLDTEAKKISNVTLAAKLDNPTYVTINRNNEYLYSVVKEGESGGVAAYSINSK
TGELTEENRQVVEGASPCHVSVDSRNHTVVTANYHKGTIESFVVNEEDGTVSPAASIMAHEGSGPNKERQEKPHAHYAGY
TPDEKYVVGVDLGIDKIITYEIKDSVLTEVNRLSVNPGSGPRHITFHPNGKYAYVMTELSSEVIVLTYNPAEGPFTELQY
ISTIPKAFDENNQGSAIHISSDGRFVYAGNRGHNSIAVFSVDENSGKLTFVAHTSTEGNWPRDFVLDPTEKFLVATNEKS
HNLVLFSRSESTGELTLLQSDVAVPEPVCVKFLNV

Sequences:

>Translated_355_residues
MKMKDNKEFIGYVGTYTKENSEGIYKFTLDTEAKKISNVTLAAKLDNPTYVTINRNNEYLYSVVKEGESGGVAAYSINSK
TGELTEENRQVVEGASPCHVSVDSRNHTVVTANYHKGTIESFVVNEEDGTVSPAASIMAHEGSGPNKERQEKPHAHYAGY
TPDEKYVVGVDLGIDKIITYEIKDSVLTEVNRLSVNPGSGPRHITFHPNGKYAYVMTELSSEVIVLTYNPAEGPFTELQY
ISTIPKAFDENNQGSAIHISSDGRFVYAGNRGHNSIAVFSVDENSGKLTFVAHTSTEGNWPRDFVLDPTEKFLVATNEKS
HNLVLFSRSESTGELTLLQSDVAVPEPVCVKFLNV
>Mature_355_residues
MKMKDNKEFIGYVGTYTKENSEGIYKFTLDTEAKKISNVTLAAKLDNPTYVTINRNNEYLYSVVKEGESGGVAAYSINSK
TGELTEENRQVVEGASPCHVSVDSRNHTVVTANYHKGTIESFVVNEEDGTVSPAASIMAHEGSGPNKERQEKPHAHYAGY
TPDEKYVVGVDLGIDKIITYEIKDSVLTEVNRLSVNPGSGPRHITFHPNGKYAYVMTELSSEVIVLTYNPAEGPFTELQY
ISTIPKAFDENNQGSAIHISSDGRFVYAGNRGHNSIAVFSVDENSGKLTFVAHTSTEGNWPRDFVLDPTEKFLVATNEKS
HNLVLFSRSESTGELTLLQSDVAVPEPVCVKFLNV

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=325, Percent_Identity=30.4615384615385, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 39045; Mature: 39045

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKDNKEFIGYVGTYTKENSEGIYKFTLDTEAKKISNVTLAAKLDNPTYVTINRNNEYL
CCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCHHHCCEEEEEEECCCEEEEEECCCCEE
YSVVKEGESGGVAAYSINSKTGELTEENRQVVEGASPCHVSVDSRNHTVVTANYHKGTIE
EEEEECCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCEEEEECCCCCEEEEEECCCCCEE
SFVVNEEDGTVSPAASIMAHEGSGPNKERQEKPHAHYAGYTPDEKYVVGVDLGIDKIITY
EEEEECCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEE
EIKDSVLTEVNRLSVNPGSGPRHITFHPNGKYAYVMTELSSEVIVLTYNPAEGPFTELQY
EECHHHHHHHHEEEECCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHH
ISTIPKAFDENNQGSAIHISSDGRFVYAGNRGHNSIAVFSVDENSGKLTFVAHTSTEGNW
HHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCEEEEEEEECCCCEEEEEEEECCCCCC
PRDFVLDPTEKFLVATNEKSHNLVLFSRSESTGELTLLQSDVAVPEPVCVKFLNV
CCCEEECCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHEEECC
>Mature Secondary Structure
MKMKDNKEFIGYVGTYTKENSEGIYKFTLDTEAKKISNVTLAAKLDNPTYVTINRNNEYL
CCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCHHHCCEEEEEEECCCEEEEEECCCCEE
YSVVKEGESGGVAAYSINSKTGELTEENRQVVEGASPCHVSVDSRNHTVVTANYHKGTIE
EEEEECCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCEEEEECCCCCEEEEEECCCCCEE
SFVVNEEDGTVSPAASIMAHEGSGPNKERQEKPHAHYAGYTPDEKYVVGVDLGIDKIITY
EEEEECCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEE
EIKDSVLTEVNRLSVNPGSGPRHITFHPNGKYAYVMTELSSEVIVLTYNPAEGPFTELQY
EECHHHHHHHHEEEECCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHH
ISTIPKAFDENNQGSAIHISSDGRFVYAGNRGHNSIAVFSVDENSGKLTFVAHTSTEGNW
HHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCEEEEEEEECCCCEEEEEEEECCCCCC
PRDFVLDPTEKFLVATNEKSHNLVLFSRSESTGELTLLQSDVAVPEPVCVKFLNV
CCCEEECCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]