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The map label for this gene is gerSC

Identifier: 227813595

GI number: 227813595

Start: 898171

End: 899307

Strand: Reverse

Name: gerSC

Synonym: BAMEG_0999

Alternate gene names: NA

Gene position: 899307-898171 (Counterclockwise)

Preceding gene: 227813596

Following gene: 227813589

Centisome position: 17.19

GC content: 32.72

Gene sequence:

>1137_bases
ATGAGGCGCTTTATTCATTTCACTATACTTTGCTTTCTCATAACCTTATTAACAGGCTGTGGAGATCGGCTAGACTTAGA
AAAACAATCCATTTCATTAATTTACGGTTTTGACGCAAAAGCAAAAGGAAAATTAATTGTATACCACGTAAATCCTATTT
TTAATGAAGACGTAGAAAAAAAGTACGAAACACATGAGGCGAAAGTACGTACACCTCGAGAAGCAAAAGCGACGTTTAAT
AGTTCAAGTGGCGGTTTAGTATCTACAGAAAAGTTACAGCTCATTTTATTTAGCACAAAATTTTTAAAACAAGAAGGGGC
TATGCCCTACCTTGATGTTTGGTATCGCGATCCTAAAAATACTGGAAACATGCGCATGGTTGCAGTAGACGGGCCAATTT
CTTCTGTTATATATAATAACTTTAAAGATAAACCTGCTCTTCCTGAGTATTTAACAGATTTAATTAATACAAATAAATTA
TACAATCGGACAGTTTTCACACCATTTCATGAATTTCATAGGCAAACGTTTAATAAAGGTATAACACCTGCTATTTCAGA
AATAAAAAAAGGAAAAAAAGATGTTATCGTTACAGGCTCTGCACTATTAACTTCTCGCGGAATTTATAAGATGTCTTTAA
ATCGCTATGAAAGCGCCCTTCTGCTCATGTTGCAAAAAAAAGCTAATATACCTGTCTCACTTACAATGAAAATCCCTTCT
CATTCAGTTGAAAGTAATAGTCATCTAAAAGATACAGAAGGTGAAGATTTCGTATCAATAAACGTTCTTAGCATGAATCG
TGATATCCGTACAGACTATAGCGATAACCATTTCAAATTTAATGTTAAAATGGATTTTAAAATTGCCGTATCTGAACTTA
CATTCAATATGGATATAGATAAAGATAGGAAGAAATTAACTTCTCTTATTACAAAACAACTAAACAAAGATTTGAACAAT
TTAATCCATAAAATTCAAAAACAACAACTTGATCCATTCGGATTTGGTGATTATGCGAGAGCGTTTCAATATGAAGAATG
GAAAAAAGTTGAAGACGATTGGCCGAGTGCCTTTTCAAAAGCTAACGTGAAAGTAGCACCTACTATTAAAATTTTAGAAA
ACGGAATTATTAAATAG

Upstream 100 bases:

>100_bases
ATTTTGGGGAACTGCCAGTTATTTTATCGTTTTTCTATTCCCAGTCGTATTTCTCTTATACATGACACTTTATCTGCATT
GGAAAAGGAGAAAAATTTAA

Downstream 100 bases:

>100_bases
CAAAAAACACGCTACTTGTTCTTATACGTTTAAAGAATAAGTAGCGTGTTATCATTTTATTTTGAAACTCCCTATATAGT
TACGCTTCTGTTTCTGATTC

Product: spore germination protein

Products: NA

Alternate protein names: Germination Protein Ger(X)C Family; Spore Germination B3 GerAC Family Protein; Spore Germination Protein GerKC; Spore Germination Protein KC; Spore Germination Protein SC

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MRRFIHFTILCFLITLLTGCGDRLDLEKQSISLIYGFDAKAKGKLIVYHVNPIFNEDVEKKYETHEAKVRTPREAKATFN
SSSGGLVSTEKLQLILFSTKFLKQEGAMPYLDVWYRDPKNTGNMRMVAVDGPISSVIYNNFKDKPALPEYLTDLINTNKL
YNRTVFTPFHEFHRQTFNKGITPAISEIKKGKKDVIVTGSALLTSRGIYKMSLNRYESALLLMLQKKANIPVSLTMKIPS
HSVESNSHLKDTEGEDFVSINVLSMNRDIRTDYSDNHFKFNVKMDFKIAVSELTFNMDIDKDRKKLTSLITKQLNKDLNN
LIHKIQKQQLDPFGFGDYARAFQYEEWKKVEDDWPSAFSKANVKVAPTIKILENGIIK

Sequences:

>Translated_378_residues
MRRFIHFTILCFLITLLTGCGDRLDLEKQSISLIYGFDAKAKGKLIVYHVNPIFNEDVEKKYETHEAKVRTPREAKATFN
SSSGGLVSTEKLQLILFSTKFLKQEGAMPYLDVWYRDPKNTGNMRMVAVDGPISSVIYNNFKDKPALPEYLTDLINTNKL
YNRTVFTPFHEFHRQTFNKGITPAISEIKKGKKDVIVTGSALLTSRGIYKMSLNRYESALLLMLQKKANIPVSLTMKIPS
HSVESNSHLKDTEGEDFVSINVLSMNRDIRTDYSDNHFKFNVKMDFKIAVSELTFNMDIDKDRKKLTSLITKQLNKDLNN
LIHKIQKQQLDPFGFGDYARAFQYEEWKKVEDDWPSAFSKANVKVAPTIKILENGIIK
>Mature_378_residues
MRRFIHFTILCFLITLLTGCGDRLDLEKQSISLIYGFDAKAKGKLIVYHVNPIFNEDVEKKYETHEAKVRTPREAKATFN
SSSGGLVSTEKLQLILFSTKFLKQEGAMPYLDVWYRDPKNTGNMRMVAVDGPISSVIYNNFKDKPALPEYLTDLINTNKL
YNRTVFTPFHEFHRQTFNKGITPAISEIKKGKKDVIVTGSALLTSRGIYKMSLNRYESALLLMLQKKANIPVSLTMKIPS
HSVESNSHLKDTEGEDFVSINVLSMNRDIRTDYSDNHFKFNVKMDFKIAVSELTFNMDIDKDRKKLTSLITKQLNKDLNN
LIHKIQKQQLDPFGFGDYARAFQYEEWKKVEDDWPSAFSKANVKVAPTIKILENGIIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43388; Mature: 43388

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFIHFTILCFLITLLTGCGDRLDLEKQSISLIYGFDAKAKGKLIVYHVNPIFNEDVEK
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHH
KYETHEAKVRTPREAKATFNSSSGGLVSTEKLQLILFSTKFLKQEGAMPYLDVWYRDPKN
HHHHHHHHCCCCCHHHHCCCCCCCCEEEHHHEEEEEEHHHHHHHCCCCCEEEEEEECCCC
TGNMRMVAVDGPISSVIYNNFKDKPALPEYLTDLINTNKLYNRTVFTPFHEFHRQTFNKG
CCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHCCCHHHCCEEECHHHHHHHHHHHCC
ITPAISEIKKGKKDVIVTGSALLTSRGIYKMSLNRYESALLLMLQKKANIPVSLTMKIPS
CCHHHHHHHCCCCCEEEECHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCC
HSVESNSHLKDTEGEDFVSINVLSMNRDIRTDYSDNHFKFNVKMDFKIAVSELTFNMDID
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCC
KDRKKLTSLITKQLNKDLNNLIHKIQKQQLDPFGFGDYARAFQYEEWKKVEDDWPSAFSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHCCCCCHHHHC
ANVKVAPTIKILENGIIK
CCEEECCHHHHHHCCCCC
>Mature Secondary Structure
MRRFIHFTILCFLITLLTGCGDRLDLEKQSISLIYGFDAKAKGKLIVYHVNPIFNEDVEK
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHH
KYETHEAKVRTPREAKATFNSSSGGLVSTEKLQLILFSTKFLKQEGAMPYLDVWYRDPKN
HHHHHHHHCCCCCHHHHCCCCCCCCEEEHHHEEEEEEHHHHHHHCCCCCEEEEEEECCCC
TGNMRMVAVDGPISSVIYNNFKDKPALPEYLTDLINTNKLYNRTVFTPFHEFHRQTFNKG
CCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHCCCHHHCCEEECHHHHHHHHHHHCC
ITPAISEIKKGKKDVIVTGSALLTSRGIYKMSLNRYESALLLMLQKKANIPVSLTMKIPS
CCHHHHHHHCCCCCEEEECHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCC
HSVESNSHLKDTEGEDFVSINVLSMNRDIRTDYSDNHFKFNVKMDFKIAVSELTFNMDID
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCC
KDRKKLTSLITKQLNKDLNNLIHKIQKQQLDPFGFGDYARAFQYEEWKKVEDDWPSAFSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHCCCCCHHHHC
ANVKVAPTIKILENGIIK
CCEEECCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA