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The map label for this gene is ydhB [H]

Identifier: 227813496

GI number: 227813496

Start: 803456

End: 804139

Strand: Direct

Name: ydhB [H]

Synonym: BAMEG_0900

Alternate gene names: 227813496

Gene position: 803456-804139 (Clockwise)

Preceding gene: 227813495

Following gene: 227813497

Centisome position: 15.36

GC content: 36.26

Gene sequence:

>684_bases
ATGCAAGGAAGAAGATGGTGGATAATTGGATTACTGGAGGGAGAGTATGTGGCAATTATTATAACGATGTTAGTAATGGG
AGTTTTATTAGGATTTGTTGGAGCTGGGGGAGCTGGGTTTATTATCGCGATACTCACGTTAGTATTCCATATTCCTATTC
ACGTTGCACTTGCAACGTCTTTAACTGCTATGGCATTTACGACATTATCTGGGGTTATAAGTCATTATCGTGAAGGAAAT
GTAGTACTTACTATAGGCGGGATTGTTGGTGGATGTGGGGCATTTGGTTCTTATATCGGTTCCAAAATTGGCTCGCTTAT
ACCACCGTATCTTCTTCATTGGTTTACAGCTGGGATGTTATTTTTATCTGCGATTTTTATGTGTATTAAATTAATTAAAT
TTCAAAATGAGGAAGAAGTACGTTTAGTAAAAATCAAAGATATTTCGAAAGAAAACATAATGAAATGTATATGTCTTGGG
TTAGTCACTGGAATGATGACTGGTTCATTCGGGATTGGTTCTGCACCATTTATTCAACTTGGATTAATGGTTCTATTAGG
ATTGACGATTCAGCAATCTGTAGGAACAACAATGCTTGTTATATTGCCGATTGCGATTGGGGGTGGGTTAGGATATAGTT
CAGAAGGGTATCTAGATTATATATTATATTATTGCAAGTATTAA

Upstream 100 bases:

>100_bases
AGTTGCTGGCCCCGCGGTTATTTTGATTAATCAAGATTAAGTACATAGTATCAATTTAGAAAAGTACGAAAAGCATCCTT
CCAGGGTGCTTTTTATTTGT

Downstream 100 bases:

>100_bases
TTGGGACGATGTTAGGAGCTTATATCGGTGCGAAGTTTACAAATTATGCACCACGTATGCTTTTGAAGTTTTCAATGATT
ATGACACCAGTTTTCGCTGG

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MQGRRWWIIGLLEGEYVAIIITMLVMGVLLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVISHYREGN
VVLTIGGIVGGCGAFGSYIGSKIGSLIPPYLLHWFTAGMLFLSAIFMCIKLIKFQNEEEVRLVKIKDISKENIMKCICLG
LVTGMMTGSFGIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILYYCKY

Sequences:

>Translated_227_residues
MQGRRWWIIGLLEGEYVAIIITMLVMGVLLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVISHYREGN
VVLTIGGIVGGCGAFGSYIGSKIGSLIPPYLLHWFTAGMLFLSAIFMCIKLIKFQNEEEVRLVKIKDISKENIMKCICLG
LVTGMMTGSFGIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILYYCKY
>Mature_227_residues
MQGRRWWIIGLLEGEYVAIIITMLVMGVLLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVISHYREGN
VVLTIGGIVGGCGAFGSYIGSKIGSLIPPYLLHWFTAGMLFLSAIFMCIKLIKFQNEEEVRLVKIKDISKENIMKCICLG
LVTGMMTGSFGIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILYYCKY

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 24346; Mature: 24346

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGRRWWIIGLLEGEYVAIIITMLVMGVLLGFVGAGGAGFIIAILTLVFHIPIHVALATS
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPPYLLHWFTAGML
HHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLSAIFMCIKLIKFQNEEEVRLVKIKDISKENIMKCICLGLVTGMMTGSFGIGSAPFIQL
HHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
GLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILYYCKY
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MQGRRWWIIGLLEGEYVAIIITMLVMGVLLGFVGAGGAGFIIAILTLVFHIPIHVALATS
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPPYLLHWFTAGML
HHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLSAIFMCIKLIKFQNEEEVRLVKIKDISKENIMKCICLGLVTGMMTGSFGIGSAPFIQL
HHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
GLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILYYCKY
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]