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The map label for this gene is ymfN [H]

Identifier: 227813444

GI number: 227813444

Start: 758528

End: 760198

Strand: Direct

Name: ymfN [H]

Synonym: BAMEG_0847

Alternate gene names: 227813444

Gene position: 758528-760198 (Clockwise)

Preceding gene: 227813443

Following gene: 227813445

Centisome position: 14.5

GC content: 34.89

Gene sequence:

>1671_bases
TTGTCTTATAACCCAATCATTGAATATTACAGCCTTATTGAATCGGGAAAAGAAATTGTTAGTGAAAAAGTTCGTAGAAT
ATATAAGAAATTAGTAAGTGATATTGATGATAAAGAAAGTATATATGAATACGACTCAAAGAAAGCAAACCATGCCATTG
AGTTCATCGAAAACTTTTGTAAGCACTCAAAGGGAAAATGGGGCGGAAAACCAATTGTTTTAGAAGTATGGCAAAAGGCA
TTTATTGCAGCAGCATTTGGATTTGTACATGGAATAGATGGCACAAGAAAATACAGAGAAGTATTACTTGTAGTTGCTCG
TAAAAATGGAAAATCTACTGTTGGCTCAGGTATTGGATTGTATTTGCAAATAGCAGATGGGGAACCAGGTTCAGAAGTTT
ATGCGGTAGCAACTAAGAAAGACCAAGCGAAATTAGTTTGGTTAGAATCAAAGCGAATGGTAAAGAAGTCACCAGCACTA
TTAAAGCGTATTAAACCTTTAGTATCTGAAATGGTTTCTGAATGGAATGATAGTACATTTAAACCACTTGGCTCTGATAG
TGAAACTTTAGATGGACTTAACGTACATGGTGCTATGATGGATGAAATCCATGCTTGGAAAGATAAAAACTTATATGACG
TTATTGTAGATGGTACTTCTTCACGAGAACAGCCAATGATATTTATGATTACAACAGCCGGAACTGTCCGAGAGTCAGTG
TATGATATGAAATATGAAGAAGCAGAAATGTTGTTAAATGGACTCGATGATCCGGATGGATATAAGGATGATCGTTTTTT
ACCTATAATCTATGAGTTGGATAAACGAGAGGAATGGACTGACCCATCAAAGTGGAAGAAAGCAAATCCTGGGCTTGGAT
CGATAAAAAAGATAGACCAACTTGAAACAAAAGTAAACAAGGCAAAAGCAAATTCTTTGTTGGTAAAAAACTTACTAACG
AAAGATTTTAATATAAGAGAAACTTCAACAGAAGCATGGCTGACTTTTGAACAACTAAATAATCCTGAAACTTTTGATAT
AGAAAAGCTAAAGCCTTCCTATGGAATTGGTGGTTGCGATTTATCTTCAACTACCGATTTAACAGCAGCGAAGGTTATTT
TTATGGTTCCAGAGGACCCACATATTTATGTGAAGCAGATGTATTGGCTTCCAGAAGATTTATTGGAGCAGCGAAGTAAA
GAAGATAAAATTCCATATAATTTATGGCACGAGCAAGGAATATTAAGAACAACACCGGGAAATTCCGTTCATTATAAATT
TGTTACGAAATGGTTTTTAGAAATACGAGATGAATATGGCATTTATCTACCTTGGATTGGTTATGATAAGTGGTCAGCTA
AGTACTGGGTTGAGGAAATGGAAGGTTATTTTGGTAAAGAATCTATGATTCCTATCGCACAAGGTAAACAAACTCTTTCT
AGCCCGATGAAACTTTTAGGAGCTGATTTGGAATCTAAGTTAATAAACTATAATAACCACACAATTGACAAGTGGTGTCT
TTCCAACACAGCCATAGACGTTGATAAAAATTTAAATATACAACCAAATAAAACAAAGAACCAACGACGTCGTATTGATG
GTACAGCAGCGCTTTTAAATGCATATGTAGTTCTTCAAGAAAAACGAAATGACTACCTCAACATGATTTAA

Upstream 100 bases:

>100_bases
AGCAGTTGGGTGATTACATACCTAAAAAAACAGTTGAAAGTAAGGAGAAGGATGATGGGTTTGATGACTTTGTGATGAAT
AAATGAGGATACAATATCTT

Downstream 100 bases:

>100_bases
GAAGGAGGTGAGAATTTGGGGTTATTTGATAAGATCTTTGGTAAGAAACAGGCTCCTACTACAACTCGTTTTGAAATGAT
AAACGATAATGGTGGAGGTT

Product: putative prophage LambdaBa01, terminase, large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 556; Mature: 555

Protein sequence:

>556_residues
MSYNPIIEYYSLIESGKEIVSEKVRRIYKKLVSDIDDKESIYEYDSKKANHAIEFIENFCKHSKGKWGGKPIVLEVWQKA
FIAAAFGFVHGIDGTRKYREVLLVVARKNGKSTVGSGIGLYLQIADGEPGSEVYAVATKKDQAKLVWLESKRMVKKSPAL
LKRIKPLVSEMVSEWNDSTFKPLGSDSETLDGLNVHGAMMDEIHAWKDKNLYDVIVDGTSSREQPMIFMITTAGTVRESV
YDMKYEEAEMLLNGLDDPDGYKDDRFLPIIYELDKREEWTDPSKWKKANPGLGSIKKIDQLETKVNKAKANSLLVKNLLT
KDFNIRETSTEAWLTFEQLNNPETFDIEKLKPSYGIGGCDLSSTTDLTAAKVIFMVPEDPHIYVKQMYWLPEDLLEQRSK
EDKIPYNLWHEQGILRTTPGNSVHYKFVTKWFLEIRDEYGIYLPWIGYDKWSAKYWVEEMEGYFGKESMIPIAQGKQTLS
SPMKLLGADLESKLINYNNHTIDKWCLSNTAIDVDKNLNIQPNKTKNQRRRIDGTAALLNAYVVLQEKRNDYLNMI

Sequences:

>Translated_556_residues
MSYNPIIEYYSLIESGKEIVSEKVRRIYKKLVSDIDDKESIYEYDSKKANHAIEFIENFCKHSKGKWGGKPIVLEVWQKA
FIAAAFGFVHGIDGTRKYREVLLVVARKNGKSTVGSGIGLYLQIADGEPGSEVYAVATKKDQAKLVWLESKRMVKKSPAL
LKRIKPLVSEMVSEWNDSTFKPLGSDSETLDGLNVHGAMMDEIHAWKDKNLYDVIVDGTSSREQPMIFMITTAGTVRESV
YDMKYEEAEMLLNGLDDPDGYKDDRFLPIIYELDKREEWTDPSKWKKANPGLGSIKKIDQLETKVNKAKANSLLVKNLLT
KDFNIRETSTEAWLTFEQLNNPETFDIEKLKPSYGIGGCDLSSTTDLTAAKVIFMVPEDPHIYVKQMYWLPEDLLEQRSK
EDKIPYNLWHEQGILRTTPGNSVHYKFVTKWFLEIRDEYGIYLPWIGYDKWSAKYWVEEMEGYFGKESMIPIAQGKQTLS
SPMKLLGADLESKLINYNNHTIDKWCLSNTAIDVDKNLNIQPNKTKNQRRRIDGTAALLNAYVVLQEKRNDYLNMI
>Mature_555_residues
SYNPIIEYYSLIESGKEIVSEKVRRIYKKLVSDIDDKESIYEYDSKKANHAIEFIENFCKHSKGKWGGKPIVLEVWQKAF
IAAAFGFVHGIDGTRKYREVLLVVARKNGKSTVGSGIGLYLQIADGEPGSEVYAVATKKDQAKLVWLESKRMVKKSPALL
KRIKPLVSEMVSEWNDSTFKPLGSDSETLDGLNVHGAMMDEIHAWKDKNLYDVIVDGTSSREQPMIFMITTAGTVRESVY
DMKYEEAEMLLNGLDDPDGYKDDRFLPIIYELDKREEWTDPSKWKKANPGLGSIKKIDQLETKVNKAKANSLLVKNLLTK
DFNIRETSTEAWLTFEQLNNPETFDIEKLKPSYGIGGCDLSSTTDLTAAKVIFMVPEDPHIYVKQMYWLPEDLLEQRSKE
DKIPYNLWHEQGILRTTPGNSVHYKFVTKWFLEIRDEYGIYLPWIGYDKWSAKYWVEEMEGYFGKESMIPIAQGKQTLSS
PMKLLGADLESKLINYNNHTIDKWCLSNTAIDVDKNLNIQPNKTKNQRRRIDGTAALLNAYVVLQEKRNDYLNMI

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage terminase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR005021
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF03354 Terminase_1 [H]

EC number: NA

Molecular weight: Translated: 63854; Mature: 63722

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYNPIIEYYSLIESGKEIVSEKVRRIYKKLVSDIDDKESIYEYDSKKANHAIEFIENFC
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHH
KHSKGKWGGKPIVLEVWQKAFIAAAFGFVHGIDGTRKYREVLLVVARKNGKSTVGSGIGL
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEECCCCCCCCCCCCEE
YLQIADGEPGSEVYAVATKKDQAKLVWLESKRMVKKSPALLKRIKPLVSEMVSEWNDSTF
EEEEECCCCCCCEEEEEECCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
KPLGSDSETLDGLNVHGAMMDEIHAWKDKNLYDVIVDGTSSREQPMIFMITTAGTVRESV
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCHHHHHH
YDMKYEEAEMLLNGLDDPDGYKDDRFLPIIYELDKREEWTDPSKWKKANPGLGSIKKIDQ
HHCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHCCCCCCCCHHHHHHH
LETKVNKAKANSLLVKNLLTKDFNIRETSTEAWLTFEQLNNPETFDIEKLKPSYGIGGCD
HHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHEEEHHHCCCCCCEEHHHCCCCCCCCCCC
LSSTTDLTAAKVIFMVPEDPHIYVKQMYWLPEDLLEQRSKEDKIPYNLWHEQGILRTTPG
CCCCCCCCEEEEEEECCCCCCEEEHHHHCCCHHHHHHCCCCCCCCHHHHHCCCEEEECCC
NSVHYKFVTKWFLEIRDEYGIYLPWIGYDKWSAKYWVEEMEGYFGKESMIPIAQGKQTLS
CCEEHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHCCHHHHH
SPMKLLGADLESKLINYNNHTIDKWCLSNTAIDVDKNLNIQPNKTKNQRRRIDGTAALLN
HHHHHHHCCHHHHHCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCHHHHHHCCHHHHHHH
AYVVLQEKRNDYLNMI
HHHHEEHHHCHHCCCC
>Mature Secondary Structure 
SYNPIIEYYSLIESGKEIVSEKVRRIYKKLVSDIDDKESIYEYDSKKANHAIEFIENFC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHH
KHSKGKWGGKPIVLEVWQKAFIAAAFGFVHGIDGTRKYREVLLVVARKNGKSTVGSGIGL
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEECCCCCCCCCCCCEE
YLQIADGEPGSEVYAVATKKDQAKLVWLESKRMVKKSPALLKRIKPLVSEMVSEWNDSTF
EEEEECCCCCCCEEEEEECCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
KPLGSDSETLDGLNVHGAMMDEIHAWKDKNLYDVIVDGTSSREQPMIFMITTAGTVRESV
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCHHHHHH
YDMKYEEAEMLLNGLDDPDGYKDDRFLPIIYELDKREEWTDPSKWKKANPGLGSIKKIDQ
HHCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHCCCCCCCCHHHHHHH
LETKVNKAKANSLLVKNLLTKDFNIRETSTEAWLTFEQLNNPETFDIEKLKPSYGIGGCD
HHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHEEEHHHCCCCCCEEHHHCCCCCCCCCCC
LSSTTDLTAAKVIFMVPEDPHIYVKQMYWLPEDLLEQRSKEDKIPYNLWHEQGILRTTPG
CCCCCCCCEEEEEEECCCCCCEEEHHHHCCCHHHHHHCCCCCCCCHHHHHCCCEEEECCC
NSVHYKFVTKWFLEIRDEYGIYLPWIGYDKWSAKYWVEEMEGYFGKESMIPIAQGKQTLS
CCEEHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHCCHHHHH
SPMKLLGADLESKLINYNNHTIDKWCLSNTAIDVDKNLNIQPNKTKNQRRRIDGTAALLN
HHHHHHHCCHHHHHCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCHHHHHHCCHHHHHHH
AYVVLQEKRNDYLNMI
HHHHEEHHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]