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The map label for this gene is 227813389

Identifier: 227813389

GI number: 227813389

Start: 722524

End: 723960

Strand: Reverse

Name: 227813389

Synonym: BAMEG_0792

Alternate gene names: NA

Gene position: 723960-722524 (Counterclockwise)

Preceding gene: 227813390

Following gene: 227813386

Centisome position: 13.84

GC content: 45.23

Gene sequence:

>1437_bases
ATGTCTCGTTATGACGACAGTCAAAACAAATTCTCCAAACCATGCTTTCCAAGTAGCGCTGGACGAATCCCGAATACTCC
ATCAATCCCAGTTACTAAGGCACAACTTAGAACATTTCGCGCAATCATTATTGATTTAACAAAAATAATCCCAAAACTTT
TCGCAAATCCATCTCCCCAAAATATTGAAGATCTAATCGATACATTGAACCTACTAAGTAAATTTATTTGTTCACTAGAC
GCTGCTTCCTCCCTGAAAGCACAAGGATTAGCTATTATTAAAAACTTAATAACTATATTAAAAAACCCAACTTTCGTAGC
AAGTGCTGTATTTATCGAGCTTCAAAATCTAATTAATTATTTACTATCCATTACAAAACTATTCCGAATTGACCCTTGCA
CACTTCAAGAGCTTCTTAAATTAATAGCAGCATTACAAACCGCTTTAGTTAATTCTGCTTCATTCATTCAAGGACCTACT
GGACCTACTGGACCTACTGGGCCAGCTGGTGCTACCGGTGCTACTGGACCTCAAGGTGTTCAAGGACCAGCAGGCGCTAC
CGGTGCCACTGGACCTCAAGGTGTTCAAGGACCAGCAGGTGCTACTGGCGCTACTGGACCTCAAGGTGCTCAAGGACCAG
CAGGTGCTACCGGTGCTACTGGACCTCAAGGTGCTCAAGGACCAGCAGGTGCTACTGGTGCCACTGGACCTCAAGGTATT
CAAGGACCAGCAGGTGCTACCGGTGCTACTGGACCTCAAGGCGTTCAAGGGCCAACGGGTGCTACTGGTATAGGAGTTAC
CGGACCTACTGGGCCTTCTGGTGGGCCTGCTGGTGCTACTGGACCTCAGGGACCTCAAGGTAATACAGGTGCTACTGGAC
CTCAAGGTATTCAAGGGCCTGCTGGTGCTACTGGTGCCACTGGACCTCAAGGTGCTCAAGGACCGGCTGGTGCTACCGGC
GCTACTGGACCTCAAGGTGTTCAAGGGCCAACGGGTGCTACTGGTATAGGAGTTACCGGACCTACTGGGCCTTCTGGACC
TAACTTCCCTGTAGCAACAATTGTTGTAACAAACAACATTCAACAAACAGTACTCCAATTTAACAACTTCATTTTTAATA
CTGCAATTAACGTAAACAACATTATCTTCAACGGCACAGATACAGTTACTGTTATCAACGCTGGTATTTATGTCATTAGC
GTATCCATCTCTACAACTGCACCAGGATGTGCACCACTCGGAGTAGGAATTTCAATAAATGGAGCAGTCGCAACTGACAA
CTTCTCTTCAAATCTAATAGGCGACTCACTTTCATTCACTACGATCGAAACGTTAACTGCCGGCGCGAACATTTCTGTCC
AATCCACTCTTAATGAGATTACGATCCCTGCAACAGGAAACACTAATATTCGTCTAACTGTATTTAGAATCGCTTAA

Upstream 100 bases:

>100_bases
TTTTTTCTTCAAACAAACGATTTTACTATGACCATTTAACTAATTTTTGCATCTACTATGATGAGTTTCATTCACATTCT
CATTAGAAAGGAGAGATTTA

Downstream 100 bases:

>100_bases
ATTTCACTATTTATTTTTTATAACAAATAAAAAAAGAGCGAGAAACTCGCTCTTTTTTTGTTATGTACAATAATTCATTA
CTACTCTAATTCAATTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Collagen Triple Helix Repeat Protein; Group-Specific Protein; Collagen Triple Helix Repeat Domain-Containing Protein; Collagen-Like Protein

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MSRYDDSQNKFSKPCFPSSAGRIPNTPSIPVTKAQLRTFRAIIIDLTKIIPKLFANPSPQNIEDLIDTLNLLSKFICSLD
AASSLKAQGLAIIKNLITILKNPTFVASAVFIELQNLINYLLSITKLFRIDPCTLQELLKLIAALQTALVNSASFIQGPT
GPTGPTGPAGATGATGPQGVQGPAGATGATGPQGVQGPAGATGATGPQGAQGPAGATGATGPQGAQGPAGATGATGPQGI
QGPAGATGATGPQGVQGPTGATGIGVTGPTGPSGGPAGATGPQGPQGNTGATGPQGIQGPAGATGATGPQGAQGPAGATG
ATGPQGVQGPTGATGIGVTGPTGPSGPNFPVATIVVTNNIQQTVLQFNNFIFNTAINVNNIIFNGTDTVTVINAGIYVIS
VSISTTAPGCAPLGVGISINGAVATDNFSSNLIGDSLSFTTIETLTAGANISVQSTLNEITIPATGNTNIRLTVFRIA

Sequences:

>Translated_478_residues
MSRYDDSQNKFSKPCFPSSAGRIPNTPSIPVTKAQLRTFRAIIIDLTKIIPKLFANPSPQNIEDLIDTLNLLSKFICSLD
AASSLKAQGLAIIKNLITILKNPTFVASAVFIELQNLINYLLSITKLFRIDPCTLQELLKLIAALQTALVNSASFIQGPT
GPTGPTGPAGATGATGPQGVQGPAGATGATGPQGVQGPAGATGATGPQGAQGPAGATGATGPQGAQGPAGATGATGPQGI
QGPAGATGATGPQGVQGPTGATGIGVTGPTGPSGGPAGATGPQGPQGNTGATGPQGIQGPAGATGATGPQGAQGPAGATG
ATGPQGVQGPTGATGIGVTGPTGPSGPNFPVATIVVTNNIQQTVLQFNNFIFNTAINVNNIIFNGTDTVTVINAGIYVIS
VSISTTAPGCAPLGVGISINGAVATDNFSSNLIGDSLSFTTIETLTAGANISVQSTLNEITIPATGNTNIRLTVFRIA
>Mature_477_residues
SRYDDSQNKFSKPCFPSSAGRIPNTPSIPVTKAQLRTFRAIIIDLTKIIPKLFANPSPQNIEDLIDTLNLLSKFICSLDA
ASSLKAQGLAIIKNLITILKNPTFVASAVFIELQNLINYLLSITKLFRIDPCTLQELLKLIAALQTALVNSASFIQGPTG
PTGPTGPAGATGATGPQGVQGPAGATGATGPQGVQGPAGATGATGPQGAQGPAGATGATGPQGAQGPAGATGATGPQGIQ
GPAGATGATGPQGVQGPTGATGIGVTGPTGPSGGPAGATGPQGPQGNTGATGPQGIQGPAGATGATGPQGAQGPAGATGA
TGPQGVQGPTGATGIGVTGPTGPSGPNFPVATIVVTNNIQQTVLQFNNFIFNTAINVNNIIFNGTDTVTVINAGIYVISV
SISTTAPGCAPLGVGISINGAVATDNFSSNLIGDSLSFTTIETLTAGANISVQSTLNEITIPATGNTNIRLTVFRIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI183583553, Length=197, Percent_Identity=36.5482233502538, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI156616290, Length=251, Percent_Identity=31.4741035856574, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI56847616, Length=238, Percent_Identity=36.1344537815126, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI65301115, Length=238, Percent_Identity=35.7142857142857, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI5803080, Length=255, Percent_Identity=38.0392156862745, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI115527062, Length=265, Percent_Identity=32.8301886792453, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI115392133, Length=218, Percent_Identity=40.3669724770642, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI115527066, Length=265, Percent_Identity=32.8301886792453, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI115527070, Length=265, Percent_Identity=32.8301886792453, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI18780273, Length=201, Percent_Identity=39.8009950248756, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI111118976, Length=188, Percent_Identity=44.1489361702128, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI111118974, Length=188, Percent_Identity=44.1489361702128, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI55743106, Length=353, Percent_Identity=28.6118980169972, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI55743098, Length=353, Percent_Identity=28.6118980169972, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI240255535, Length=353, Percent_Identity=28.6118980169972, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI73486666, Length=196, Percent_Identity=42.8571428571429, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI122937273, Length=349, Percent_Identity=29.2263610315186, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI32140760, Length=200, Percent_Identity=40.5, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI119829187, Length=204, Percent_Identity=41.1764705882353, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI89363017, Length=234, Percent_Identity=41.4529914529915, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI48762934, Length=202, Percent_Identity=39.6039603960396, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI111118970, Length=258, Percent_Identity=34.4961240310078, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI111118968, Length=258, Percent_Identity=34.4961240310078, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI111118972, Length=258, Percent_Identity=34.4961240310078, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI87196339, Length=217, Percent_Identity=34.1013824884793, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI98985806, Length=150, Percent_Identity=40.6666666666667, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI299523257, Length=150, Percent_Identity=40.6666666666667, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI98985810, Length=150, Percent_Identity=40.6666666666667, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI11386161, Length=179, Percent_Identity=45.2513966480447, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI299523253, Length=150, Percent_Identity=40.6666666666667, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI110735435, Length=171, Percent_Identity=41.5204678362573, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI145701009, Length=235, Percent_Identity=33.1914893617021, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI40805823, Length=222, Percent_Identity=34.2342342342342, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI154759255, Length=293, Percent_Identity=34.1296928327645, Blast_Score=66, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17539078, Length=277, Percent_Identity=32.129963898917, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17535735, Length=183, Percent_Identity=40.4371584699454, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17507107, Length=255, Percent_Identity=34.1176470588235, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17566918, Length=204, Percent_Identity=37.2549019607843, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71992048, Length=199, Percent_Identity=40.7035175879397, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17569903, Length=228, Percent_Identity=35.9649122807018, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193203538, Length=197, Percent_Identity=34.5177664974619, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI17137252, Length=204, Percent_Identity=40.6862745098039, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46780; Mature: 46649

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRYDDSQNKFSKPCFPSSAGRIPNTPSIPVTKAQLRTFRAIIIDLTKIIPKLFANPSPQ
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NIEDLIDTLNLLSKFICSLDAASSLKAQGLAIIKNLITILKNPTFVASAVFIELQNLINY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LLSITKLFRIDPCTLQELLKLIAALQTALVNSASFIQGPTGPTGPTGPAGATGATGPQGV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
QGPAGATGATGPQGVQGPAGATGATGPQGAQGPAGATGATGPQGAQGPAGATGATGPQGI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QGPAGATGATGPQGVQGPTGATGIGVTGPTGPSGGPAGATGPQGPQGNTGATGPQGIQGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGATGATGPQGAQGPAGATGATGPQGVQGPTGATGIGVTGPTGPSGPNFPVATIVVTNNI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCH
QQTVLQFNNFIFNTAINVNNIIFNGTDTVTVINAGIYVISVSISTTAPGCAPLGVGISIN
HHHHHHHHHEEEEEEEEECCEEECCCCEEEEEECCEEEEEEEEECCCCCCCEEECCEEEC
GAVATDNFSSNLIGDSLSFTTIETLTAGANISVQSTLNEITIPATGNTNIRLTVFRIA
CEEEECCCCCCCCCCCCCCEEHHHHHCCCCEEEEECCCEEEECCCCCCCEEEEEEEEC
>Mature Secondary Structure 
SRYDDSQNKFSKPCFPSSAGRIPNTPSIPVTKAQLRTFRAIIIDLTKIIPKLFANPSPQ
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NIEDLIDTLNLLSKFICSLDAASSLKAQGLAIIKNLITILKNPTFVASAVFIELQNLINY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LLSITKLFRIDPCTLQELLKLIAALQTALVNSASFIQGPTGPTGPTGPAGATGATGPQGV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
QGPAGATGATGPQGVQGPAGATGATGPQGAQGPAGATGATGPQGAQGPAGATGATGPQGI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QGPAGATGATGPQGVQGPTGATGIGVTGPTGPSGGPAGATGPQGPQGNTGATGPQGIQGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGATGATGPQGAQGPAGATGATGPQGVQGPTGATGIGVTGPTGPSGPNFPVATIVVTNNI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCH
QQTVLQFNNFIFNTAINVNNIIFNGTDTVTVINAGIYVISVSISTTAPGCAPLGVGISIN
HHHHHHHHHEEEEEEEEECCEEECCCCEEEEEECCEEEEEEEEECCCCCCCEEECCEEEC
GAVATDNFSSNLIGDSLSFTTIETLTAGANISVQSTLNEITIPATGNTNIRLTVFRIA
CEEEECCCCCCCCCCCCCCEEHHHHHCCCCEEEEECCCEEEECCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA