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The map label for this gene is yisK [H]

Identifier: 227812909

GI number: 227812909

Start: 228360

End: 229319

Strand: Direct

Name: yisK [H]

Synonym: BAMEG_0270

Alternate gene names: 227812909

Gene position: 228360-229319 (Clockwise)

Preceding gene: 227812908

Following gene: 227812910

Centisome position: 4.37

GC content: 39.9

Gene sequence:

>960_bases
ATGATGAAATTTGTTACATTTCGTCTTCCTTCAAAAGAAATGCGAGCTGGATGGCTTGAAGGTGACAAAGTAATCGATAT
GAATCTTGCTAGTGATGGGAAATTACCTTCTTCTATGTTCGCCTTTTTAGAGAAAGCGGATGAGTATGTAGAAGTATTGC
GTAATATTAAGAACCCGGAAAAGGGCATATATTCTTTAGAGGAAGTGCAATTAGCAGCAGCGATTCCTAATCCGAGTAGT
ATTCGGGATTTTTACGCGTTTGAGCAGCATGTAAAAACGGCACGTGGCCGAAGAGGGCTAGATGTTGTACCAGAATGGTA
TGATATCCCGGTTTTTTATTTTACGAACCATCGTGCTGTAATTGGTCCGAATGATGTTGTAATTGGTCCGAAAAAATCTG
AAAAAATTGATTATGAGTTAGAGATTGCTTGCGTAATCGGGAAAGAAGGAAGAAATATTTCTCGTGAGCAAGCAGAGGAA
TACATTTTTGGTTATTGTATTATGAATGATTGGAGTGCAAGGGACTTACAAGCAACAGAAATGAAGGTAGGACTTGGTCC
AGCGAAAGGAAAAGATTTTGCAACTTCATTAGGAGCGCACCTTGTTACGAAAGAGGAATTAGATGTTTACCGCAACGGTG
ACCGTTATGAGTTAGAGATGACTGCTCATGTGAATGGAAAGCTATTATCAAAAGGGAACTTCCAAGATATTTACTATACA
TTTGCTGAAATGATTGAACGTGCTTCGGAAGATGTTACGTTATACCCAGGTGATGTGATTGGTTCTGGGACAGTAGGAAC
AGGTTGTATTTTAGAACTGGGTACAGAAGAGTGGCTGCAAGATGGTGATGTGGTAGAGCTTACGATTACTGGTTTAGGTA
CATTACGTAATACGGTCAAAAAAGAAAAGGAAGCAGGTGATGAGCATGTTTTATCGTCACATGGGGGAGCTACCTCATAA

Upstream 100 bases:

>100_bases
AATTGAAAGAGAACAAGAGCGTCGCGGGAATTTATAAAATTTATATCCACCAGCAATAATTCTTTTGCTGGTGGAAATTT
CATTTTCATAGGGAGGAATC

Downstream 100 bases:

>100_bases
ACGACATGTACAATTCCGTAAAAAAGATGGATCGCTTTATCGTGAACAGGTAATGGGAACAAAAGGTTTTTCTGGTACGC
AATCTATTTTGTATCATCAT

Product: fumarylacetoacetate hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MMKFVTFRLPSKEMRAGWLEGDKVIDMNLASDGKLPSSMFAFLEKADEYVEVLRNIKNPEKGIYSLEEVQLAAAIPNPSS
IRDFYAFEQHVKTARGRRGLDVVPEWYDIPVFYFTNHRAVIGPNDVVIGPKKSEKIDYELEIACVIGKEGRNISREQAEE
YIFGYCIMNDWSARDLQATEMKVGLGPAKGKDFATSLGAHLVTKEELDVYRNGDRYELEMTAHVNGKLLSKGNFQDIYYT
FAEMIERASEDVTLYPGDVIGSGTVGTGCILELGTEEWLQDGDVVELTITGLGTLRNTVKKEKEAGDEHVLSSHGGATS

Sequences:

>Translated_319_residues
MMKFVTFRLPSKEMRAGWLEGDKVIDMNLASDGKLPSSMFAFLEKADEYVEVLRNIKNPEKGIYSLEEVQLAAAIPNPSS
IRDFYAFEQHVKTARGRRGLDVVPEWYDIPVFYFTNHRAVIGPNDVVIGPKKSEKIDYELEIACVIGKEGRNISREQAEE
YIFGYCIMNDWSARDLQATEMKVGLGPAKGKDFATSLGAHLVTKEELDVYRNGDRYELEMTAHVNGKLLSKGNFQDIYYT
FAEMIERASEDVTLYPGDVIGSGTVGTGCILELGTEEWLQDGDVVELTITGLGTLRNTVKKEKEAGDEHVLSSHGGATS
>Mature_319_residues
MMKFVTFRLPSKEMRAGWLEGDKVIDMNLASDGKLPSSMFAFLEKADEYVEVLRNIKNPEKGIYSLEEVQLAAAIPNPSS
IRDFYAFEQHVKTARGRRGLDVVPEWYDIPVFYFTNHRAVIGPNDVVIGPKKSEKIDYELEIACVIGKEGRNISREQAEE
YIFGYCIMNDWSARDLQATEMKVGLGPAKGKDFATSLGAHLVTKEELDVYRNGDRYELEMTAHVNGKLLSKGNFQDIYYT
FAEMIERASEDVTLYPGDVIGSGTVGTGCILELGTEEWLQDGDVVELTITGLGTLRNTVKKEKEAGDEHVLSSHGGATS

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=310, Percent_Identity=30.3225806451613, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI40786394, Length=305, Percent_Identity=30.4918032786885, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI4557587, Length=289, Percent_Identity=28.0276816608997, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI13654274, Length=194, Percent_Identity=27.8350515463918, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI215422413, Length=156, Percent_Identity=28.8461538461538, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI66348062, Length=156, Percent_Identity=28.8461538461538, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17568863, Length=270, Percent_Identity=28.8888888888889, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI28572127, Length=190, Percent_Identity=37.3684210526316, Blast_Score=121, Evalue=5e-28,
Organism=Drosophila melanogaster, GI24657182, Length=274, Percent_Identity=28.4671532846715, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24663695, Length=305, Percent_Identity=24.5901639344262, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571789, Length=197, Percent_Identity=25.3807106598985, Blast_Score=71, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 35584; Mature: 35584

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKFVTFRLPSKEMRAGWLEGDKVIDMNLASDGKLPSSMFAFLEKADEYVEVLRNIKNPE
CCEEEEEECCCHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
KGIYSLEEVQLAAAIPNPSSIRDFYAFEQHVKTARGRRGLDVVPEWYDIPVFYFTNHRAV
HHCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEEE
IGPNDVVIGPKKSEKIDYELEIACVIGKEGRNISREQAEEYIFGYCIMNDWSARDLQATE
ECCCCEEECCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHEEEEEEEECCCCCCCCEEEE
MKVGLGPAKGKDFATSLGAHLVTKEELDVYRNGDRYELEMTAHVNGKLLSKGNFQDIYYT
EEECCCCCCCCHHHHHHHHHHEEHHHHHHHCCCCEEEEEEEEECCCEEECCCCCHHHHHH
FAEMIERASEDVTLYPGDVIGSGTVGTGCILELGTEEWLQDGDVVELTITGLGTLRNTVK
HHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEECCHHHHCCCCEEEEEEECCHHHHHHHH
KEKEAGDEHVLSSHGGATS
HHHHCCCHHHHHCCCCCCC
>Mature Secondary Structure
MMKFVTFRLPSKEMRAGWLEGDKVIDMNLASDGKLPSSMFAFLEKADEYVEVLRNIKNPE
CCEEEEEECCCHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
KGIYSLEEVQLAAAIPNPSSIRDFYAFEQHVKTARGRRGLDVVPEWYDIPVFYFTNHRAV
HHCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEEE
IGPNDVVIGPKKSEKIDYELEIACVIGKEGRNISREQAEEYIFGYCIMNDWSARDLQATE
ECCCCEEECCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHEEEEEEEECCCCCCCCEEEE
MKVGLGPAKGKDFATSLGAHLVTKEELDVYRNGDRYELEMTAHVNGKLLSKGNFQDIYYT
EEECCCCCCCCHHHHHHHHHHEEHHHHHHHCCCCEEEEEEEEECCCEEECCCCCHHHHHH
FAEMIERASEDVTLYPGDVIGSGTVGTGCILELGTEEWLQDGDVVELTITGLGTLRNTVK
HHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEECCHHHHCCCCEEEEEEECCHHHHHHHH
KEKEAGDEHVLSSHGGATS
HHHHCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377 [H]