| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
Click here to switch to the map view.
The map label for this gene is 227082445
Identifier: 227082445
GI number: 227082445
Start: 2409429
End: 2409530
Strand: Reverse
Name: 227082445
Synonym: VCM66_2244
Alternate gene names: NA
Gene position: 2409530-2409429 (Counterclockwise)
Preceding gene: 227082446
Following gene: 227082444
Centisome position: 83.3
GC content: 50.98
Gene sequence:
>102_bases ATGACGTGGGAAGTGGGTGGCCGCCAGAAAATCATTATTGGTGTAGGGCGTTCGCTGTACGGCCACAGGTCAGAGGGACC TAAATTCTTGTGTAACCAATGA
Upstream 100 bases:
>100_bases GTGGAGTGATGAACTGGCAAAAACGCTGCGCCAATTGGCCATCAAAGTGCTGCAAACACCGCGTTTACAAGTGCAAGATG CCGAACAGGTTTAATCATGA
Downstream 100 bases:
>100_bases ATTTGTTAACGTGCGCGCAGTGTAAAGCGCCGCCTTGGCTTGTGCCGTGAAGTGGATCCCATAAGCCCATACTCAATCAC GGTTTTTAGTTTAATGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 33; Mature: 32
Protein sequence:
>33_residues MTWEVGGRQKIIIGVGRSLYGHRSEGPKFLCNQ
Sequences:
>Translated_33_residues MTWEVGGRQKIIIGVGRSLYGHRSEGPKFLCNQ >Mature_32_residues TWEVGGRQKIIIGVGRSLYGHRSEGPKFLCNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3718; Mature: 3587
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWEVGGRQKIIIGVGRSLYGHRSEGPKFLCNQ CCCCCCCCEEEEEECCCCCCCCCCCCCEEECCC >Mature Secondary Structure TWEVGGRQKIIIGVGRSLYGHRSEGPKFLCNQ CCCCCCCEEEEEECCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA