Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

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The map label for this gene is 227082274

Identifier: 227082274

GI number: 227082274

Start: 2239361

End: 2239648

Strand: Reverse

Name: 227082274

Synonym: VCM66_2072

Alternate gene names: NA

Gene position: 2239648-2239361 (Counterclockwise)

Preceding gene: 227082276

Following gene: 227082273

Centisome position: 77.43

GC content: 49.31

Gene sequence:

>288_bases
ATGGAACTGAGTCCTGTATTCGCAAGGCGCTTATATTTAGCTTTGCTTGTGGAGAGCCTTGAGCGACCCAATGTCCCTAA
ACTGATTGAAAAGACGGGCTGGCCTCGTCGTACTATCCAAGATGTCATCAAAGCCATGCCGGGTATCGGTATTGAACTGA
ACTTCGTGCAAGATGGCCGCCGACACAATGATGGCTACTACCAGCTTTCTGACTGGGGTCCCTTTGACAGCCAATGGGTC
ACCGAACGCAAAAAAGACATTGCGGCAAGCTTAGGGTTTTGTGCTTAA

Upstream 100 bases:

>100_bases
TAGCCTACTAAAGTAAATCGATTGGCAAGTTATTGATCAAACGCAACACATCACACAGTAAAACGGAAATAATGAGCACA
GCATACTTTAGGAGGTATCA

Downstream 100 bases:

>100_bases
AGCCAGCATCGCTGGCTTTTTCATTTTCCACATTATGCGGCTTGGCACATCATGCGGCTTGGTGCGTCAGCTGTTTTGCC
ACAACCAGTAACTGATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MELSPVFARRLYLALLVESLERPNVPKLIEKTGWPRRTIQDVIKAMPGIGIELNFVQDGRRHNDGYYQLSDWGPFDSQWV
TERKKDIAASLGFCA

Sequences:

>Translated_95_residues
MELSPVFARRLYLALLVESLERPNVPKLIEKTGWPRRTIQDVIKAMPGIGIELNFVQDGRRHNDGYYQLSDWGPFDSQWV
TERKKDIAASLGFCA
>Mature_95_residues
MELSPVFARRLYLALLVESLERPNVPKLIEKTGWPRRTIQDVIKAMPGIGIELNFVQDGRRHNDGYYQLSDWGPFDSQWV
TERKKDIAASLGFCA

Specific function: Unknown

COG id: COG4519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10921; Mature: 10921

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSPVFARRLYLALLVESLERPNVPKLIEKTGWPRRTIQDVIKAMPGIGIELNFVQDGR
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCC
RHNDGYYQLSDWGPFDSQWVTERKKDIAASLGFCA
CCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MELSPVFARRLYLALLVESLERPNVPKLIEKTGWPRRTIQDVIKAMPGIGIELNFVQDGR
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCC
RHNDGYYQLSDWGPFDSQWVTERKKDIAASLGFCA
CCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA