Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

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The map label for this gene is fliG

Identifier: 227082257

GI number: 227082257

Start: 2222546

End: 2223592

Strand: Reverse

Name: fliG

Synonym: VCM66_2055

Alternate gene names: 227082257

Gene position: 2223592-2222546 (Counterclockwise)

Preceding gene: 227082258

Following gene: 227082256

Centisome position: 76.87

GC content: 49.19

Gene sequence:

>1047_bases
ATGGCTAAAGACAATAAAGATGGTGGAGAAGTGGTCGAATCAACCATTGATATCAGTGAAATTCCCGGTGAAGAAAAAGC
AGCCATTTTGCTGCTCAGTTTGAATGAAGAAGATGCCGCAGGCATCATTCGCCACCTCGAGCCTAAACAGGTACAGCGGG
TGGGTAGCGCCATGGCACGCGCCAAAGACTTAAGCCAAACCAAAGTGTCAGCGGTGCATCGTGCCTTTTTGGAAGATATT
CAAAAATACACCAACATTGGTATGGGCAGTGAAGACTTCCTACGTAATGCTCTGGTTGCGGCATTGGGGGCGGATAAAGC
CAACAACTTGGTGGATCAAATTCTGCTTGGTACCGGCTCGAAAGGTCTGGATTCACTAAAATGGATGGATCCACGTCAAG
TAGCGAGCATTATTATCAACGAGCACCCGCAGATCCAAACCATCGTATTGTCGTACCTTGAGCCGGATCAATCGGCCGAG
ATTTTGGCGCAGTTTGCTCAGCGTGACGCTCTCGATTTGTTGATGCGTATCGCTAACTTGGAAGAAGTACAGCCTTCAGC
GCTGGCCGAGTTGAACGAAATCATGGAGAAACAATTCGCGGGTCAAGCGGGGGCACAAGCGGCCAAAATTGGTGGCTTGA
AAGCTGCTGCCGACATCATGAACTATCTGGACAACAACATCGAAAGCGTATTGATGGAAGGAATGCGCGAAAAAGACGAA
GACTTGGCAACTCAGATCCAAGATTTGATGTTTGTGTTCGAGAACTTGGTCGAAGTCGACGATCAAGGCATCCAAAAATT
GCTGCGTGATGTTCCGCAAGATGTCTTGCAAAAAGCCCTCAAAGGGGCAGACGATACGCTGCGCGAGAAGATCTTCAAGA
ACATGTCGAAACGTGCTGCTGAGATGATGAAAGACGATTTGGAGGCGATGCCACCGATCAAAGTGTCCGATGTGGAAGCG
GCTCAGAAAGAGATCTTGTCTATCGCTCGTCGTATGGCCGACAACGGCGAGATCATGCTGGGCGGCGGTGCCGACGAATT
CTTATAA

Upstream 100 bases:

>100_bases
CCGAATCTTCACAAGGATGAGGACGTGCTGAAAGCAGTACGTGCCTTGGTGGCAAACGAGCCAGAACTCGCGGCTCAAGT
AGTGAAGAACTGGATGCAAA

Downstream 100 bases:

>100_bases
TCAAGTAGGATCGGTGTAAGCCGATCCTATTTCCTTCAATGCATTATTTTGATGAACGTTAAACAAAACTTGCTGCATGA
TTGAGGATCACAATGTCTGG

Product: flagellar motor switch protein G

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MAKDNKDGGEVVESTIDISEIPGEEKAAILLLSLNEEDAAGIIRHLEPKQVQRVGSAMARAKDLSQTKVSAVHRAFLEDI
QKYTNIGMGSEDFLRNALVAALGADKANNLVDQILLGTGSKGLDSLKWMDPRQVASIIINEHPQIQTIVLSYLEPDQSAE
ILAQFAQRDALDLLMRIANLEEVQPSALAELNEIMEKQFAGQAGAQAAKIGGLKAAADIMNYLDNNIESVLMEGMREKDE
DLATQIQDLMFVFENLVEVDDQGIQKLLRDVPQDVLQKALKGADDTLREKIFKNMSKRAAEMMKDDLEAMPPIKVSDVEA
AQKEILSIARRMADNGEIMLGGGADEFL

Sequences:

>Translated_348_residues
MAKDNKDGGEVVESTIDISEIPGEEKAAILLLSLNEEDAAGIIRHLEPKQVQRVGSAMARAKDLSQTKVSAVHRAFLEDI
QKYTNIGMGSEDFLRNALVAALGADKANNLVDQILLGTGSKGLDSLKWMDPRQVASIIINEHPQIQTIVLSYLEPDQSAE
ILAQFAQRDALDLLMRIANLEEVQPSALAELNEIMEKQFAGQAGAQAAKIGGLKAAADIMNYLDNNIESVLMEGMREKDE
DLATQIQDLMFVFENLVEVDDQGIQKLLRDVPQDVLQKALKGADDTLREKIFKNMSKRAAEMMKDDLEAMPPIKVSDVEA
AQKEILSIARRMADNGEIMLGGGADEFL
>Mature_347_residues
AKDNKDGGEVVESTIDISEIPGEEKAAILLLSLNEEDAAGIIRHLEPKQVQRVGSAMARAKDLSQTKVSAVHRAFLEDIQ
KYTNIGMGSEDFLRNALVAALGADKANNLVDQILLGTGSKGLDSLKWMDPRQVASIIINEHPQIQTIVLSYLEPDQSAEI
LAQFAQRDALDLLMRIANLEEVQPSALAELNEIMEKQFAGQAGAQAAKIGGLKAAADIMNYLDNNIESVLMEGMREKDED
LATQIQDLMFVFENLVEVDDQGIQKLLRDVPQDVLQKALKGADDTLREKIFKNMSKRAAEMMKDDLEAMPPIKVSDVEAA
QKEILSIARRMADNGEIMLGGGADEFL

Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f

COG id: COG1536

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body (By similarity)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliG family

Homologues:

Organism=Escherichia coli, GI1788249, Length=332, Percent_Identity=39.7590361445783, Blast_Score=251, Evalue=4e-68,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLIG_VIBCH (Q9X4Q9)

Other databases:

- EMBL:   AF117332
- EMBL:   AE003852
- PIR:   D82114
- RefSeq:   NP_231763.1
- ProteinModelPortal:   Q9X4Q9
- SMR:   Q9X4Q9
- GeneID:   2613388
- GenomeReviews:   AE003852_GR
- KEGG:   vch:VC2132
- TIGR:   VC_2132
- HOGENOM:   HBG368483
- OMA:   ESLKWMD
- ProtClustDB:   PRK05686
- GO:   GO:0006935
- InterPro:   IPR000090
- InterPro:   IPR023087
- InterPro:   IPR011002
- Gene3D:   G3DSA:1.10.220.30
- PRINTS:   PR00954
- TIGRFAMs:   TIGR00207

Pfam domain/function: PF01706 FliG_C; SSF48029 FliG_like

EC number: NA

Molecular weight: Translated: 38157; Mature: 38026

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKDNKDGGEVVESTIDISEIPGEEKAAILLLSLNEEDAAGIIRHLEPKQVQRVGSAMAR
CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHH
AKDLSQTKVSAVHRAFLEDIQKYTNIGMGSEDFLRNALVAALGADKANNLVDQILLGTGS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
KGLDSLKWMDPRQVASIIINEHPQIQTIVLSYLEPDQSAEILAQFAQRDALDLLMRIANL
CCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
EEVQPSALAELNEIMEKQFAGQAGAQAAKIGGLKAAADIMNYLDNNIESVLMEGMREKDE
HHCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLATQIQDLMFVFENLVEVDDQGIQKLLRDVPQDVLQKALKGADDTLREKIFKNMSKRAA
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EMMKDDLEAMPPIKVSDVEAAQKEILSIARRMADNGEIMLGGGADEFL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC
>Mature Secondary Structure 
AKDNKDGGEVVESTIDISEIPGEEKAAILLLSLNEEDAAGIIRHLEPKQVQRVGSAMAR
CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHH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HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301