| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is fliG
Identifier: 227082257
GI number: 227082257
Start: 2222546
End: 2223592
Strand: Reverse
Name: fliG
Synonym: VCM66_2055
Alternate gene names: 227082257
Gene position: 2223592-2222546 (Counterclockwise)
Preceding gene: 227082258
Following gene: 227082256
Centisome position: 76.87
GC content: 49.19
Gene sequence:
>1047_bases ATGGCTAAAGACAATAAAGATGGTGGAGAAGTGGTCGAATCAACCATTGATATCAGTGAAATTCCCGGTGAAGAAAAAGC AGCCATTTTGCTGCTCAGTTTGAATGAAGAAGATGCCGCAGGCATCATTCGCCACCTCGAGCCTAAACAGGTACAGCGGG TGGGTAGCGCCATGGCACGCGCCAAAGACTTAAGCCAAACCAAAGTGTCAGCGGTGCATCGTGCCTTTTTGGAAGATATT CAAAAATACACCAACATTGGTATGGGCAGTGAAGACTTCCTACGTAATGCTCTGGTTGCGGCATTGGGGGCGGATAAAGC CAACAACTTGGTGGATCAAATTCTGCTTGGTACCGGCTCGAAAGGTCTGGATTCACTAAAATGGATGGATCCACGTCAAG TAGCGAGCATTATTATCAACGAGCACCCGCAGATCCAAACCATCGTATTGTCGTACCTTGAGCCGGATCAATCGGCCGAG ATTTTGGCGCAGTTTGCTCAGCGTGACGCTCTCGATTTGTTGATGCGTATCGCTAACTTGGAAGAAGTACAGCCTTCAGC GCTGGCCGAGTTGAACGAAATCATGGAGAAACAATTCGCGGGTCAAGCGGGGGCACAAGCGGCCAAAATTGGTGGCTTGA AAGCTGCTGCCGACATCATGAACTATCTGGACAACAACATCGAAAGCGTATTGATGGAAGGAATGCGCGAAAAAGACGAA GACTTGGCAACTCAGATCCAAGATTTGATGTTTGTGTTCGAGAACTTGGTCGAAGTCGACGATCAAGGCATCCAAAAATT GCTGCGTGATGTTCCGCAAGATGTCTTGCAAAAAGCCCTCAAAGGGGCAGACGATACGCTGCGCGAGAAGATCTTCAAGA ACATGTCGAAACGTGCTGCTGAGATGATGAAAGACGATTTGGAGGCGATGCCACCGATCAAAGTGTCCGATGTGGAAGCG GCTCAGAAAGAGATCTTGTCTATCGCTCGTCGTATGGCCGACAACGGCGAGATCATGCTGGGCGGCGGTGCCGACGAATT CTTATAA
Upstream 100 bases:
>100_bases CCGAATCTTCACAAGGATGAGGACGTGCTGAAAGCAGTACGTGCCTTGGTGGCAAACGAGCCAGAACTCGCGGCTCAAGT AGTGAAGAACTGGATGCAAA
Downstream 100 bases:
>100_bases TCAAGTAGGATCGGTGTAAGCCGATCCTATTTCCTTCAATGCATTATTTTGATGAACGTTAAACAAAACTTGCTGCATGA TTGAGGATCACAATGTCTGG
Product: flagellar motor switch protein G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MAKDNKDGGEVVESTIDISEIPGEEKAAILLLSLNEEDAAGIIRHLEPKQVQRVGSAMARAKDLSQTKVSAVHRAFLEDI QKYTNIGMGSEDFLRNALVAALGADKANNLVDQILLGTGSKGLDSLKWMDPRQVASIIINEHPQIQTIVLSYLEPDQSAE ILAQFAQRDALDLLMRIANLEEVQPSALAELNEIMEKQFAGQAGAQAAKIGGLKAAADIMNYLDNNIESVLMEGMREKDE DLATQIQDLMFVFENLVEVDDQGIQKLLRDVPQDVLQKALKGADDTLREKIFKNMSKRAAEMMKDDLEAMPPIKVSDVEA AQKEILSIARRMADNGEIMLGGGADEFL
Sequences:
>Translated_348_residues MAKDNKDGGEVVESTIDISEIPGEEKAAILLLSLNEEDAAGIIRHLEPKQVQRVGSAMARAKDLSQTKVSAVHRAFLEDI QKYTNIGMGSEDFLRNALVAALGADKANNLVDQILLGTGSKGLDSLKWMDPRQVASIIINEHPQIQTIVLSYLEPDQSAE ILAQFAQRDALDLLMRIANLEEVQPSALAELNEIMEKQFAGQAGAQAAKIGGLKAAADIMNYLDNNIESVLMEGMREKDE DLATQIQDLMFVFENLVEVDDQGIQKLLRDVPQDVLQKALKGADDTLREKIFKNMSKRAAEMMKDDLEAMPPIKVSDVEA AQKEILSIARRMADNGEIMLGGGADEFL >Mature_347_residues AKDNKDGGEVVESTIDISEIPGEEKAAILLLSLNEEDAAGIIRHLEPKQVQRVGSAMARAKDLSQTKVSAVHRAFLEDIQ KYTNIGMGSEDFLRNALVAALGADKANNLVDQILLGTGSKGLDSLKWMDPRQVASIIINEHPQIQTIVLSYLEPDQSAEI LAQFAQRDALDLLMRIANLEEVQPSALAELNEIMEKQFAGQAGAQAAKIGGLKAAADIMNYLDNNIESVLMEGMREKDED LATQIQDLMFVFENLVEVDDQGIQKLLRDVPQDVLQKALKGADDTLREKIFKNMSKRAAEMMKDDLEAMPPIKVSDVEAA QKEILSIARRMADNGEIMLGGGADEFL
Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f
COG id: COG1536
COG function: function code N; Flagellar motor switch protein
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body (By similarity)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliG family
Homologues:
Organism=Escherichia coli, GI1788249, Length=332, Percent_Identity=39.7590361445783, Blast_Score=251, Evalue=4e-68,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): FLIG_VIBCH (Q9X4Q9)
Other databases:
- EMBL: AF117332 - EMBL: AE003852 - PIR: D82114 - RefSeq: NP_231763.1 - ProteinModelPortal: Q9X4Q9 - SMR: Q9X4Q9 - GeneID: 2613388 - GenomeReviews: AE003852_GR - KEGG: vch:VC2132 - TIGR: VC_2132 - HOGENOM: HBG368483 - OMA: ESLKWMD - ProtClustDB: PRK05686 - GO: GO:0006935 - InterPro: IPR000090 - InterPro: IPR023087 - InterPro: IPR011002 - Gene3D: G3DSA:1.10.220.30 - PRINTS: PR00954 - TIGRFAMs: TIGR00207
Pfam domain/function: PF01706 FliG_C; SSF48029 FliG_like
EC number: NA
Molecular weight: Translated: 38157; Mature: 38026
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKDNKDGGEVVESTIDISEIPGEEKAAILLLSLNEEDAAGIIRHLEPKQVQRVGSAMAR CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHH AKDLSQTKVSAVHRAFLEDIQKYTNIGMGSEDFLRNALVAALGADKANNLVDQILLGTGS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC KGLDSLKWMDPRQVASIIINEHPQIQTIVLSYLEPDQSAEILAQFAQRDALDLLMRIANL CCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH EEVQPSALAELNEIMEKQFAGQAGAQAAKIGGLKAAADIMNYLDNNIESVLMEGMREKDE HHCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLATQIQDLMFVFENLVEVDDQGIQKLLRDVPQDVLQKALKGADDTLREKIFKNMSKRAA HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EMMKDDLEAMPPIKVSDVEAAQKEILSIARRMADNGEIMLGGGADEFL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC >Mature Secondary Structure AKDNKDGGEVVESTIDISEIPGEEKAAILLLSLNEEDAAGIIRHLEPKQVQRVGSAMAR CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHH AKDLSQTKVSAVHRAFLEDIQKYTNIGMGSEDFLRNALVAALGADKANNLVDQILLGTGS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC KGLDSLKWMDPRQVASIIINEHPQIQTIVLSYLEPDQSAEILAQFAQRDALDLLMRIANL CCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH EEVQPSALAELNEIMEKQFAGQAGAQAAKIGGLKAAADIMNYLDNNIESVLMEGMREKDE HHCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLATQIQDLMFVFENLVEVDDQGIQKLLRDVPQDVLQKALKGADDTLREKIFKNMSKRAA HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EMMKDDLEAMPPIKVSDVEAAQKEILSIARRMADNGEIMLGGGADEFL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301