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The map label for this gene is yfcM [H]

Identifier: 227082238

GI number: 227082238

Start: 2207644

End: 2208174

Strand: Reverse

Name: yfcM [H]

Synonym: VCM66_2036

Alternate gene names: 227082238

Gene position: 2208174-2207644 (Counterclockwise)

Preceding gene: 227082239

Following gene: 227082237

Centisome position: 76.34

GC content: 47.65

Gene sequence:

>531_bases
ATGAACCATCAATACCAAGACCTCATTGATATTTTCAATCAGACGTTTTACGCCGATTACAACACCAAGCTGGAGTTGGG
CGGCGATGAGCCCATTTATTTACCGGCGGATGAACGAGTCAGTTACCACCGGATTATTTTTGCTCGTGGCTTTTATGCTT
CCGCTTTGCATGAAATCGCTCACTGGTGTGTGGCTGGGCCGCAGCGGCGTCTGCTTGAAGATTTTGGTTACTGGTATGAG
CCGGATGGTCGTACTGCACAAGTGCAGGCGGAATTTGAAAAAGTGGAAATTCGTCCGCAAGCTTATGAGTGGATTTTAGC
CATAAGCGCAGGCTTTCCCTTTACCGTAAGTTGTGACAACCTCAACGGTGATTTTGAGCCAGACCGTTTGGCTTTTATGA
GCAAGGTACACAGTGAAGTGCTCAAGATTCTTGAACAAGGTTTACCGCAGCGAGTGAAGATGTTGTCGGAGGCGTTACGC
GCTTTTTACCAAACGCCCGCCTTGCTGCCTGAACACTTTGTGGTTAAATAA

Upstream 100 bases:

>100_bases
AATTGATTCCTAATAGAAGCCGATGGTTTGCGGTTTAGCTCTTTACCCGATGAGAAAAAATCTCCAGAATGCACGCCGTC
ACCCATATTGACTATGTACT

Downstream 100 bases:

>100_bases
CCCTAGGTGAAAACCATTTATCCATTAACGAGAAGCTGATGATTATTGAATTTGAAGAGAAACTGCTGGATCTGATTGAT
GCACAAGTCGTTAACGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MNHQYQDLIDIFNQTFYADYNTKLELGGDEPIYLPADERVSYHRIIFARGFYASALHEIAHWCVAGPQRRLLEDFGYWYE
PDGRTAQVQAEFEKVEIRPQAYEWILAISAGFPFTVSCDNLNGDFEPDRLAFMSKVHSEVLKILEQGLPQRVKMLSEALR
AFYQTPALLPEHFVVK

Sequences:

>Translated_176_residues
MNHQYQDLIDIFNQTFYADYNTKLELGGDEPIYLPADERVSYHRIIFARGFYASALHEIAHWCVAGPQRRLLEDFGYWYE
PDGRTAQVQAEFEKVEIRPQAYEWILAISAGFPFTVSCDNLNGDFEPDRLAFMSKVHSEVLKILEQGLPQRVKMLSEALR
AFYQTPALLPEHFVVK
>Mature_176_residues
MNHQYQDLIDIFNQTFYADYNTKLELGGDEPIYLPADERVSYHRIIFARGFYASALHEIAHWCVAGPQRRLLEDFGYWYE
PDGRTAQVQAEFEKVEIRPQAYEWILAISAGFPFTVSCDNLNGDFEPDRLAFMSKVHSEVLKILEQGLPQRVKMLSEALR
AFYQTPALLPEHFVVK

Specific function: Unknown

COG id: COG3101

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1563 [H]

Homologues:

Organism=Escherichia coli, GI1788666, Length=172, Percent_Identity=57.5581395348837, Blast_Score=225, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007411 [H]

Pfam domain/function: PF04315 DUF462 [H]

EC number: NA

Molecular weight: Translated: 20451; Mature: 20451

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHQYQDLIDIFNQTFYADYNTKLELGGDEPIYLPADERVSYHRIIFARGFYASALHEIA
CCCHHHHHHHHHHHHEEECCCCEEEECCCCCEEECCCCCCCHHHEEEECCHHHHHHHHHH
HWCVAGPQRRLLEDFGYWYEPDGRTAQVQAEFEKVEIRPQAYEWILAISAGFPFTVSCDN
HHHHCCHHHHHHHHCCCEECCCCCEEEEEEEEHHEECCHHHHEEEEEEECCCCEEEEECC
LNGDFEPDRLAFMSKVHSEVLKILEQGLPQRVKMLSEALRAFYQTPALLPEHFVVK
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNHQYQDLIDIFNQTFYADYNTKLELGGDEPIYLPADERVSYHRIIFARGFYASALHEIA
CCCHHHHHHHHHHHHEEECCCCEEEECCCCCEEECCCCCCCHHHEEEECCHHHHHHHHHH
HWCVAGPQRRLLEDFGYWYEPDGRTAQVQAEFEKVEIRPQAYEWILAISAGFPFTVSCDN
HHHHCCHHHHHHHHCCCEECCCCCEEEEEEEEHHEECCHHHHEEEEEEECCCCEEEEECC
LNGDFEPDRLAFMSKVHSEVLKILEQGLPQRVKMLSEALRAFYQTPALLPEHFVVK
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]