| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
Click here to switch to the map view.
The map label for this gene is cheZ [H]
Identifier: 227082191
GI number: 227082191
Start: 2157012
End: 2157731
Strand: Reverse
Name: cheZ [H]
Synonym: VCM66_1988
Alternate gene names: 227082191
Gene position: 2157731-2157012 (Counterclockwise)
Preceding gene: 227082192
Following gene: 227082190
Centisome position: 74.6
GC content: 45.28
Gene sequence:
>720_bases ATGATTTCATTAGAACAGGCTAAAGAACTCGTGCAACTTTTGGAACAAGGACGTCAAGACGACGCTAATCGCCTTTTCAC CTATGTCTACGAGTCTGCCAATAACCCTATGTTTAAAGAGATAGGGATGCTGACGCGAGACTTACACGAAGCGCTGAAAA ACTTTCAGATTGATGAGCGCTTCAGTGAAATCGCGACGGATGAAATTCCAGACGCACGGGAAAGACTGCATTACGTTATA CAGAAAACGGAAGTCGCAGCGAACAAAACCATGGATGCAGTGGATCGGTGTATGCCGATAGCCGACAAACTACATGAAAG CTTGCTGCTGATTCGCCCTGAATGGAATGGCTTGATGAATGGTCGGATTGAACTGATGCACTTCAAGTCACTATGCCACC GGATTGATGACTTGCTCTCGCAAGTAGAAGGCGACAGCAGTGAATTGCGTGGTGAATTGACTGAGATCCTGATGGCTCAA GACTTTCAAGACCTGACAGGACAAATCATCAAACGTGTGATTAATCTGGTCAATGAGGTTGAAAAACGTTTAGTCGAAAT ACTGACGGTTTTTGGCGCAGCGCAAAAAGAACAAAAAGCAGACAAGGCGACAGTGGCATCAATAGAACCAGAGGGGCCGA TTCTCAATCCTCATGAACGAATTGATGCTGTCTCATCTCAAGACGAAGTTGACGATCTGTTATCGAGTCTTGGATTTTAG
Upstream 100 bases:
>100_bases GCTACGCTTAAAGAAAAATTAGACAAAATTTTTGAGCGTTTATAAGGCTTTTGCTGCGGCAAAAGGTGCTCTATTCACAC GCGCAAAAGGCTGATTCAGG
Downstream 100 bases:
>100_bases GGGTAACGTATGAGCTACGAATTAGACGAAGACATCCTGCAGGACTTTCTGGTAGAAGCCGGCGAAATATTGGAGTTGCT TTCCGAGCAGCTCGTTGAAC
Product: chemotaxis protein CheZ
Products: NA
Alternate protein names: Chemotaxis protein CheZ [H]
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MISLEQAKELVQLLEQGRQDDANRLFTYVYESANNPMFKEIGMLTRDLHEALKNFQIDERFSEIATDEIPDARERLHYVI QKTEVAANKTMDAVDRCMPIADKLHESLLLIRPEWNGLMNGRIELMHFKSLCHRIDDLLSQVEGDSSELRGELTEILMAQ DFQDLTGQIIKRVINLVNEVEKRLVEILTVFGAAQKEQKADKATVASIEPEGPILNPHERIDAVSSQDEVDDLLSSLGF
Sequences:
>Translated_239_residues MISLEQAKELVQLLEQGRQDDANRLFTYVYESANNPMFKEIGMLTRDLHEALKNFQIDERFSEIATDEIPDARERLHYVI QKTEVAANKTMDAVDRCMPIADKLHESLLLIRPEWNGLMNGRIELMHFKSLCHRIDDLLSQVEGDSSELRGELTEILMAQ DFQDLTGQIIKRVINLVNEVEKRLVEILTVFGAAQKEQKADKATVASIEPEGPILNPHERIDAVSSQDEVDDLLSSLGF >Mature_239_residues MISLEQAKELVQLLEQGRQDDANRLFTYVYESANNPMFKEIGMLTRDLHEALKNFQIDERFSEIATDEIPDARERLHYVI QKTEVAANKTMDAVDRCMPIADKLHESLLLIRPEWNGLMNGRIELMHFKSLCHRIDDLLSQVEGDSSELRGELTEILMAQ DFQDLTGQIIKRVINLVNEVEKRLVEILTVFGAAQKEQKADKATVASIEPEGPILNPHERIDAVSSQDEVDDLLSSLGF
Specific function: Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) [H]
COG id: COG3143
COG function: function code NT; Chemotaxis protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CheZ family [H]
Homologues:
Organism=Escherichia coli, GI1788190, Length=209, Percent_Identity=34.4497607655502, Blast_Score=114, Evalue=5e-27,
Paralogues:
None
Copy number: 292 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007439 [H]
Pfam domain/function: PF04344 CheZ [H]
EC number: NA
Molecular weight: Translated: 27232; Mature: 27232
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLEQAKELVQLLEQGRQDDANRLFTYVYESANNPMFKEIGMLTRDLHEALKNFQIDER CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHH FSEIATDEIPDARERLHYVIQKTEVAANKTMDAVDRCMPIADKLHESLLLIRPEWNGLMN HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC GRIELMHFKSLCHRIDDLLSQVEGDSSELRGELTEILMAQDFQDLTGQIIKRVINLVNEV CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKRLVEILTVFGAAQKEQKADKATVASIEPEGPILNPHERIDAVSSQDEVDDLLSSLGF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MISLEQAKELVQLLEQGRQDDANRLFTYVYESANNPMFKEIGMLTRDLHEALKNFQIDER CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHH FSEIATDEIPDARERLHYVIQKTEVAANKTMDAVDRCMPIADKLHESLLLIRPEWNGLMN HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC GRIELMHFKSLCHRIDDLLSQVEGDSSELRGELTEILMAQDFQDLTGQIIKRVINLVNEV CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKRLVEILTVFGAAQKEQKADKATVASIEPEGPILNPHERIDAVSSQDEVDDLLSSLGF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7860605; 10052136; 10984043 [H]