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The map label for this gene is ynbA [C]

Identifier: 227082065

GI number: 227082065

Start: 2023845

End: 2024603

Strand: Direct

Name: ynbA [C]

Synonym: VCM66_1859

Alternate gene names: 227082065

Gene position: 2023845-2024603 (Clockwise)

Preceding gene: 227082064

Following gene: 227082066

Centisome position: 69.97

GC content: 50.33

Gene sequence:

>759_bases
GTGCGGATTGGTGGTACCACATCGCCTATTGCTAGCCACTCTTTCTATGTGGCAACAAGAGGTTATATGGACAAGACACA
ATCTGAAGAGAAAAATCGCCGCCCACTTGCGGTCAGAGATCTGAACTTCACCAAACGTATCGCCGTTTGGTTGAGCCAAA
AGCAGATCACCCCTAACCAAATTTCACTCATGAGTATTGCCTTTGCGCTGCTTGGCTGTGCCATTTTGGCCGTATATCAC
TACTATCCTGCCCCGCTTTGGCTCATTCTGGCGGCCTTATCGATTCAAGCGCGTTTACTGTGTAACTTGTTTGATGGCAT
GGTTGCCGTAGAAGGCGGCAAGAAGACCCCTGCTGGCGAATTGTTTAATGATGTACCGGATCGGATCGCCGACCCTTTGT
TGATTCTTGGTGCAGGTTTTGTCACGACTTCTGCGCTGGGAATGACCTTGGCATGGCTTTGTGCGCTTCTTGCGGTGCTG
ACCGCCTATATTCGTGTATTGGGAGTCAGCATAGGCGGTGAAGCTGATTTTCAAGGCCCGATGGCTAAACAGCATCGCAT
GGCGCTGCTTACCCTCAGTTTGCTCTTTATCGCGGCACTTTCACTGTTCGATGAGCTCCCAACCTTTTTCGCATACACCA
TGGATCTCACCTTAATCGTCATGCTGATTGGGCTGGTACTCACGGTTTGGCGACGCTTACAGCACATTTATCAATTCCAT
GCGGCGCGTGCATCCTCGTCCGATCATCAAGGTAACTAG

Upstream 100 bases:

>100_bases
ATCCACGCAAATTAATGAGTAATGCATTAGCAATACAATGCAACAAGATTGAGACGCGTGCCAAAAAACAGGTAACCCTA
CTTGGTATGACTTCTTTTCA

Downstream 100 bases:

>100_bases
TCATGCTCAACATTCCTCAACACTCACTGCACTTGATGTTGGTGATTTTGACCATTTTAGTGGTAGGTACACTCTGTTAT
TTGTGGCTGTCTCGCCGCTA

Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase-related protein

Products: NA

Alternate protein names: Transmembrane Phosphatidyltransferase Family Protein; CDP-Diaglycerol-Glycerol-3-Phosphatidyltransferase; Phosphatidylinositol Synthase; CDP-Diacylglycerol-Inositol 3-Phosphatidyltransferase

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MRIGGTTSPIASHSFYVATRGYMDKTQSEEKNRRPLAVRDLNFTKRIAVWLSQKQITPNQISLMSIAFALLGCAILAVYH
YYPAPLWLILAALSIQARLLCNLFDGMVAVEGGKKTPAGELFNDVPDRIADPLLILGAGFVTTSALGMTLAWLCALLAVL
TAYIRVLGVSIGGEADFQGPMAKQHRMALLTLSLLFIAALSLFDELPTFFAYTMDLTLIVMLIGLVLTVWRRLQHIYQFH
AARASSSDHQGN

Sequences:

>Translated_252_residues
MRIGGTTSPIASHSFYVATRGYMDKTQSEEKNRRPLAVRDLNFTKRIAVWLSQKQITPNQISLMSIAFALLGCAILAVYH
YYPAPLWLILAALSIQARLLCNLFDGMVAVEGGKKTPAGELFNDVPDRIADPLLILGAGFVTTSALGMTLAWLCALLAVL
TAYIRVLGVSIGGEADFQGPMAKQHRMALLTLSLLFIAALSLFDELPTFFAYTMDLTLIVMLIGLVLTVWRRLQHIYQFH
AARASSSDHQGN
>Mature_252_residues
MRIGGTTSPIASHSFYVATRGYMDKTQSEEKNRRPLAVRDLNFTKRIAVWLSQKQITPNQISLMSIAFALLGCAILAVYH
YYPAPLWLILAALSIQARLLCNLFDGMVAVEGGKKTPAGELFNDVPDRIADPLLILGAGFVTTSALGMTLAWLCALLAVL
TAYIRVLGVSIGGEADFQGPMAKQHRMALLTLSLLFIAALSLFDELPTFFAYTMDLTLIVMLIGLVLTVWRRLQHIYQFH
AARASSSDHQGN

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27689; Mature: 27689

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGGTTSPIASHSFYVATRGYMDKTQSEEKNRRPLAVRDLNFTKRIAVWLSQKQITPNQ
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCCHH
ISLMSIAFALLGCAILAVYHYYPAPLWLILAALSIQARLLCNLFDGMVAVEGGKKTPAGE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHH
LFNDVPDRIADPLLILGAGFVTTSALGMTLAWLCALLAVLTAYIRVLGVSIGGEADFQGP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
MAKQHRMALLTLSLLFIAALSLFDELPTFFAYTMDLTLIVMLIGLVLTVWRRLQHIYQFH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARASSSDHQGN
HHHCCCCCCCCC
>Mature Secondary Structure
MRIGGTTSPIASHSFYVATRGYMDKTQSEEKNRRPLAVRDLNFTKRIAVWLSQKQITPNQ
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCCHH
ISLMSIAFALLGCAILAVYHYYPAPLWLILAALSIQARLLCNLFDGMVAVEGGKKTPAGE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHH
LFNDVPDRIADPLLILGAGFVTTSALGMTLAWLCALLAVLTAYIRVLGVSIGGEADFQGP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
MAKQHRMALLTLSLLFIAALSLFDELPTFFAYTMDLTLIVMLIGLVLTVWRRLQHIYQFH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARASSSDHQGN
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA