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The map label for this gene is 227082026

Identifier: 227082026

GI number: 227082026

Start: 1979497

End: 1980915

Strand: Reverse

Name: 227082026

Synonym: VCM66_1820

Alternate gene names: NA

Gene position: 1980915-1979497 (Counterclockwise)

Preceding gene: 227082027

Following gene: 227082025

Centisome position: 68.48

GC content: 48.13

Gene sequence:

>1419_bases
ATGTTGATGGTGACGAATCACGTGGTTCAATACATTAAACGACCTATACGTAGCCTCACTCTTACTTCACTACTGCTCGC
GGGGTGTGCCAATCTCACTGCGGGCAATCTTTTTAGCCATTACAGTGCGCAAAACAGTGATTTATATCAGTCTGTTGCGG
CAGGGCAATACCAACAAGCTACGCAGTTATTGCCCGATTATGTCGCCGGTGAAGTGTTAGACAACCTTGAAAAAGGTCGG
GTTTATTTTCTTAGCCAGCAATACGCAGAAAGCCAGCAAAGTTTGGCTGCTGCAGATTTGGCGGTTAAACAGCAGCAAGA
CCGAGCGATCATCTCTGTGAGTAGTACCGCGACCAGTGTGGGTTCGCTGGCGGTCAACGATAACTTGAATGAGTACGAAC
CTGCCGATTATGAACTGGGCTTTTTGCACCTGTACTTAGGGCTGAATTATGTGCGCAATAATGATCTGGATGGTGCATTA
GTTGAAATGCGCCGCGCTAACCAAGTTCAGGAAGCCGCTAAAAAACGCCGTGAACAAGCGTTGTCCAGTGCGGAGCAAGA
GATGCGCTCACAAGGATTATCCCCGAACTTAGGCAGTGTGCTTGCACAATATCCAGATGCCGGAAAAACCTTACAAGCGG
TGCAAAATGGTTATCTGTTGTATCTTTCGGCGCTGCTTTATGAAGCGGATAATGATTTGAACTCGGCTTATGTTGACTAC
CGCAGAGCACTGGCGGTTGCCCCCAATAATCCATCGGTTATTGATGGAACACTTCGAGTCGCGTCTCGGCTTGGCATGCA
ACAAGATCTCAAGCTTCTTAAACAGCAATATGGTGAGCCTAAACGCTTAACCTCTGCGCAAGGCCGAGTCATCGTCATAG
AAGAGCAGGGTATAGTACAACCTAAGCAAGCGTGGCGACTCTCTTTACCTTTGTCTGACAGTCGTGGCAATACGGCGCTG
TATTCTTTGGCTCTGCCTTATTATTCATCTTCGGTGGCGCAGAGTCGTGTACCGATCAGTCTAAATGGCGCTAGTTTGGC
CTCTATGCCAGTTACTGATGTGGATTTGATGGCTAAGCAGGCATTAACGGAGCAAATGCCTGCGCTGGTACTGCGCCAAG
CGCTGCGTGTGGTCGCCAAAGACCAATTACGCAAAGAGACGACTCAGGAAGAGGATGTCGCCAATTTAGTGTTTAATATT
TGGAATACGTTAACGGAGCAGCCTGATACACGCAGCTGGTTAACCTTGCCCGCCACAGTCAATACGGCCACCCAAGTGGT
GAAAGCGGGTGATCAAGTGCTGGATATTGCAGGGACTCACTATACCTTTCATGTTCCAGAAAATGGCACAGTGTTAGTTT
GGCTATCTCACCAAGGTAACAATGTGACAATTTGGCATAAACAACTAGGGATACGGTAA

Upstream 100 bases:

>100_bases
CTGCAACTCACACGGGGGTCAGGAGGTCTATCACATCCATATGCATTTGGTGGGTGGTCGTCCGCTTGGGCCGCTTTTGA
TGGGTTAACTTCATTCTCCG

Downstream 100 bases:

>100_bases
TGAGAACGTGGCTATTAGCAGTATTAACCGCTTTACTCTTAGTGGGATGCAGTGCTAACACTGCGGGTTTGCGAGTGGAT
GGCGCATCACAGCAAGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Lipoprotein; Adenine DNA Methylase; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MLMVTNHVVQYIKRPIRSLTLTSLLLAGCANLTAGNLFSHYSAQNSDLYQSVAAGQYQQATQLLPDYVAGEVLDNLEKGR
VYFLSQQYAESQQSLAAADLAVKQQQDRAIISVSSTATSVGSLAVNDNLNEYEPADYELGFLHLYLGLNYVRNNDLDGAL
VEMRRANQVQEAAKKRREQALSSAEQEMRSQGLSPNLGSVLAQYPDAGKTLQAVQNGYLLYLSALLYEADNDLNSAYVDY
RRALAVAPNNPSVIDGTLRVASRLGMQQDLKLLKQQYGEPKRLTSAQGRVIVIEEQGIVQPKQAWRLSLPLSDSRGNTAL
YSLALPYYSSSVAQSRVPISLNGASLASMPVTDVDLMAKQALTEQMPALVLRQALRVVAKDQLRKETTQEEDVANLVFNI
WNTLTEQPDTRSWLTLPATVNTATQVVKAGDQVLDIAGTHYTFHVPENGTVLVWLSHQGNNVTIWHKQLGIR

Sequences:

>Translated_472_residues
MLMVTNHVVQYIKRPIRSLTLTSLLLAGCANLTAGNLFSHYSAQNSDLYQSVAAGQYQQATQLLPDYVAGEVLDNLEKGR
VYFLSQQYAESQQSLAAADLAVKQQQDRAIISVSSTATSVGSLAVNDNLNEYEPADYELGFLHLYLGLNYVRNNDLDGAL
VEMRRANQVQEAAKKRREQALSSAEQEMRSQGLSPNLGSVLAQYPDAGKTLQAVQNGYLLYLSALLYEADNDLNSAYVDY
RRALAVAPNNPSVIDGTLRVASRLGMQQDLKLLKQQYGEPKRLTSAQGRVIVIEEQGIVQPKQAWRLSLPLSDSRGNTAL
YSLALPYYSSSVAQSRVPISLNGASLASMPVTDVDLMAKQALTEQMPALVLRQALRVVAKDQLRKETTQEEDVANLVFNI
WNTLTEQPDTRSWLTLPATVNTATQVVKAGDQVLDIAGTHYTFHVPENGTVLVWLSHQGNNVTIWHKQLGIR
>Mature_472_residues
MLMVTNHVVQYIKRPIRSLTLTSLLLAGCANLTAGNLFSHYSAQNSDLYQSVAAGQYQQATQLLPDYVAGEVLDNLEKGR
VYFLSQQYAESQQSLAAADLAVKQQQDRAIISVSSTATSVGSLAVNDNLNEYEPADYELGFLHLYLGLNYVRNNDLDGAL
VEMRRANQVQEAAKKRREQALSSAEQEMRSQGLSPNLGSVLAQYPDAGKTLQAVQNGYLLYLSALLYEADNDLNSAYVDY
RRALAVAPNNPSVIDGTLRVASRLGMQQDLKLLKQQYGEPKRLTSAQGRVIVIEEQGIVQPKQAWRLSLPLSDSRGNTAL
YSLALPYYSSSVAQSRVPISLNGASLASMPVTDVDLMAKQALTEQMPALVLRQALRVVAKDQLRKETTQEEDVANLVFNI
WNTLTEQPDTRSWLTLPATVNTATQVVKAGDQVLDIAGTHYTFHVPENGTVLVWLSHQGNNVTIWHKQLGIR

Specific function: Unknown

COG id: COG3014

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52025; Mature: 52025

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS50005 TPR L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMVTNHVVQYIKRPIRSLTLTSLLLAGCANLTAGNLFSHYSAQNSDLYQSVAAGQYQQA
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCHHHHH
TQLLPDYVAGEVLDNLEKGRVYFLSQQYAESQQSLAAADLAVKQQQDRAIISVSSTATSV
HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
GSLAVNDNLNEYEPADYELGFLHLYLGLNYVRNNDLDGALVEMRRANQVQEAAKKRREQA
CCEEECCCCCCCCCCCCCHHHEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LSSAEQEMRSQGLSPNLGSVLAQYPDAGKTLQAVQNGYLLYLSALLYEADNDLNSAYVDY
HHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHH
RRALAVAPNNPSVIDGTLRVASRLGMQQDLKLLKQQYGEPKRLTSAQGRVIVIEEQGIVQ
HHHEEECCCCCCEEHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCCCEEEEECCCCCC
PKQAWRLSLPLSDSRGNTALYSLALPYYSSSVAQSRVPISLNGASLASMPVTDVDLMAKQ
CCHHEEEECCCCCCCCCEEEEEEECCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHH
ALTEQMPALVLRQALRVVAKDQLRKETTQEEDVANLVFNIWNTLTEQPDTRSWLTLPATV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCH
NTATQVVKAGDQVLDIAGTHYTFHVPENGTVLVWLSHQGNNVTIWHKQLGIR
HHHHHHHHCCCCEEEECCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCCC
>Mature Secondary Structure
MLMVTNHVVQYIKRPIRSLTLTSLLLAGCANLTAGNLFSHYSAQNSDLYQSVAAGQYQQA
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCHHHHH
TQLLPDYVAGEVLDNLEKGRVYFLSQQYAESQQSLAAADLAVKQQQDRAIISVSSTATSV
HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
GSLAVNDNLNEYEPADYELGFLHLYLGLNYVRNNDLDGALVEMRRANQVQEAAKKRREQA
CCEEECCCCCCCCCCCCCHHHEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LSSAEQEMRSQGLSPNLGSVLAQYPDAGKTLQAVQNGYLLYLSALLYEADNDLNSAYVDY
HHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHH
RRALAVAPNNPSVIDGTLRVASRLGMQQDLKLLKQQYGEPKRLTSAQGRVIVIEEQGIVQ
HHHEEECCCCCCEEHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCCCEEEEECCCCCC
PKQAWRLSLPLSDSRGNTALYSLALPYYSSSVAQSRVPISLNGASLASMPVTDVDLMAKQ
CCHHEEEECCCCCCCCCEEEEEEECCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHH
ALTEQMPALVLRQALRVVAKDQLRKETTQEEDVANLVFNIWNTLTEQPDTRSWLTLPATV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCH
NTATQVVKAGDQVLDIAGTHYTFHVPENGTVLVWLSHQGNNVTIWHKQLGIR
HHHHHHHHCCCCEEEECCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA