| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227082021
Identifier: 227082021
GI number: 227082021
Start: 1976601
End: 1976741
Strand: Direct
Name: 227082021
Synonym: VCM66_1815
Alternate gene names: NA
Gene position: 1976601-1976741 (Clockwise)
Preceding gene: 227082019
Following gene: 227082028
Centisome position: 68.33
GC content: 39.72
Gene sequence:
>141_bases TTGGGTGAGGTTTGGTTACTCTCAGTGGCACGTTACTCGGCAGCAAAAAGCTGCGCTAACACAAATAATCGGCAAGTTTT CCACTCGCTCTCAATTTATTTTGATATTTATCAACAAATCTTAGTGCTGGTCATTATATAG
Upstream 100 bases:
>100_bases AACAACAATCCTCAAATAAAGATGAATAATTATTATCCAGCCCGATTGCTCGTGCTGAGGGAATCTGTTATCGCCATGAT GCGTTTAACATCCAGCAGAC
Downstream 100 bases:
>100_bases GGCTGATTTCATCACGCAACCACAGATTAAGCCATTCTCATTAGATTTTTTGTGGGTTTGGATAAGTAAAAACAGCCTCT AAAAGAGGCTGTTCAAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 46; Mature: 45
Protein sequence:
>46_residues MGEVWLLSVARYSAAKSCANTNNRQVFHSLSIYFDIYQQILVLVII
Sequences:
>Translated_46_residues MGEVWLLSVARYSAAKSCANTNNRQVFHSLSIYFDIYQQILVLVII >Mature_45_residues GEVWLLSVARYSAAKSCANTNNRQVFHSLSIYFDIYQQILVLVII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5276; Mature: 5145
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEVWLLSVARYSAAKSCANTNNRQVFHSLSIYFDIYQQILVLVII CCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GEVWLLSVARYSAAKSCANTNNRQVFHSLSIYFDIYQQILVLVII CCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA