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The map label for this gene is yccT [C]

Identifier: 227081982

GI number: 227081982

Start: 1928325

End: 1928999

Strand: Reverse

Name: yccT [C]

Synonym: VCM66_1776

Alternate gene names: 227081982

Gene position: 1928999-1928325 (Counterclockwise)

Preceding gene: 227081983

Following gene: 227081977

Centisome position: 66.69

GC content: 37.04

Gene sequence:

>675_bases
ATGAAACTTAACCCACTGATTTTAGGTCTTCTGTTGTCATTTTCAGCAGGTCACTCATTAGCCGATGTAGTATTAAAAGT
GCCAGAAAATATTGATTTACTTTCTGTAAATATGCAAAAACCAAAATCTGAAGGCGGATTATTTGGTGATAAAACGATTA
TGCTTAAAGATGGCACGAACCAGATTGTGTTTCGTTATATTCCTACTTTCGATGATGGTGACGATGTTAAGAAGGTATAT
AGCGATACAATTATTGCAAAATTTGAGAGTGAAAATGCCACTCTTCACTTTAAGATTCCTAGTTATCGCAATATAAAAGA
AGCAAATGAGAAAATTCAAACAATGGAGTGGCAACTTGTTGACGAAAAAGGGCAATCTGTCGCTCTAGTAGAAGACAAAC
TACTCAATCCAGGTGTTCAATGGGGCAGAAATTACAGCCAAGAAGCTACAGAATATAACCAAAATGGAGGGGTTGCTGCG
ATCGGATACCTGAAAGTAGTTACTAATGAGGCTCAGCTATCTGAAAATACGACACAAGTTATTATGAGCGAAGCTTCTCA
ACCATTAGAAGTAGTCGGATCATCAAATAACCTGACTCAACTTCAACTTTGGTATAGCAAAGCCTCAAAAGAAGAACGCA
AAGCGTTTAAGAAATGGATGGTCGATCAAGAATAA

Upstream 100 bases:

>100_bases
TGAGAAAGCCCGGCTGCTGCCGGGCTTTTTTATTGTGATGTGCAAGATAAGTGATTATTGTTGTTGTGTTTATTTTTATA
CGAAACAAGGTAGTTAGATA

Downstream 100 bases:

>100_bases
GCGAAAGCCTGCGCATGCAGGCTTTACTCTATTATCCACAGCACTTTTTATATTTCTTGCCACTACCGCAAGCACAAGGG
TCGTTACGGCCTTGTTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKLNPLILGLLLSFSAGHSLADVVLKVPENIDLLSVNMQKPKSEGGLFGDKTIMLKDGTNQIVFRYIPTFDDGDDVKKVY
SDTIIAKFESENATLHFKIPSYRNIKEANEKIQTMEWQLVDEKGQSVALVEDKLLNPGVQWGRNYSQEATEYNQNGGVAA
IGYLKVVTNEAQLSENTTQVIMSEASQPLEVVGSSNNLTQLQLWYSKASKEERKAFKKWMVDQE

Sequences:

>Translated_224_residues
MKLNPLILGLLLSFSAGHSLADVVLKVPENIDLLSVNMQKPKSEGGLFGDKTIMLKDGTNQIVFRYIPTFDDGDDVKKVY
SDTIIAKFESENATLHFKIPSYRNIKEANEKIQTMEWQLVDEKGQSVALVEDKLLNPGVQWGRNYSQEATEYNQNGGVAA
IGYLKVVTNEAQLSENTTQVIMSEASQPLEVVGSSNNLTQLQLWYSKASKEERKAFKKWMVDQE
>Mature_224_residues
MKLNPLILGLLLSFSAGHSLADVVLKVPENIDLLSVNMQKPKSEGGLFGDKTIMLKDGTNQIVFRYIPTFDDGDDVKKVY
SDTIIAKFESENATLHFKIPSYRNIKEANEKIQTMEWQLVDEKGQSVALVEDKLLNPGVQWGRNYSQEATEYNQNGGVAA
IGYLKVVTNEAQLSENTTQVIMSEASQPLEVVGSSNNLTQLQLWYSKASKEERKAFKKWMVDQE

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1853_VIBCH (Q9KQZ4)

Other databases:

- EMBL:   AE003852
- PIR:   F82150
- RefSeq:   NP_231487.1
- GeneID:   2613607
- GenomeReviews:   AE003852_GR
- KEGG:   vch:VC1853
- TIGR:   VC_1853
- HOGENOM:   HBG625766
- OMA:   EPLVINF
- ProtClustDB:   CLSK794419
- HAMAP:   MF_00789
- InterPro:   IPR018635

Pfam domain/function: PF09829 DUF2057

EC number: NA

Molecular weight: Translated: 25136; Mature: 25136

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNPLILGLLLSFSAGHSLADVVLKVPENIDLLSVNMQKPKSEGGLFGDKTIMLKDGTN
CCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCC
QIVFRYIPTFDDGDDVKKVYSDTIIAKFESENATLHFKIPSYRNIKEANEKIQTMEWQLV
EEEEEEECCCCCCHHHHHHHHHHEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHEEEEE
DEKGQSVALVEDKLLNPGVQWGRNYSQEATEYNQNGGVAAIGYLKVVTNEAQLSENTTQV
CCCCCEEEEEHHHHCCCCHHHCCCCCHHHHHHCCCCCEEEEEEEEEEECHHHHCCCHHHH
IMSEASQPLEVVGSSNNLTQLQLWYSKASKEERKAFKKWMVDQE
HHHHCCCCEEEECCCCCCEEEEEEHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLNPLILGLLLSFSAGHSLADVVLKVPENIDLLSVNMQKPKSEGGLFGDKTIMLKDGTN
CCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCC
QIVFRYIPTFDDGDDVKKVYSDTIIAKFESENATLHFKIPSYRNIKEANEKIQTMEWQLV
EEEEEEECCCCCCHHHHHHHHHHEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHEEEEE
DEKGQSVALVEDKLLNPGVQWGRNYSQEATEYNQNGGVAAIGYLKVVTNEAQLSENTTQV
CCCCCEEEEEHHHHCCCCHHHCCCCCHHHHHHCCCCCEEEEEEEEEEECHHHHCCCHHHH
IMSEASQPLEVVGSSNNLTQLQLWYSKASKEERKAFKKWMVDQE
HHHHCCCCEEEECCCCCCEEEEEEHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301