| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
Click here to switch to the map view.
The map label for this gene is 227081942
Identifier: 227081942
GI number: 227081942
Start: 1891031
End: 1891123
Strand: Reverse
Name: 227081942
Synonym: VCM66_1736
Alternate gene names: NA
Gene position: 1891123-1891031 (Counterclockwise)
Preceding gene: 227081945
Following gene: 227081941
Centisome position: 65.38
GC content: 41.94
Gene sequence:
>93_bases TTGAGCGATCATGCGGTAATGGGATTGATCCTCGAAAAGAGAGTGTGCGTAACAGATTGCAATGATGAATCTGAGGTCAA TAGCCATGAATAA
Upstream 100 bases:
>100_bases TCGTAAATCGTTGGTAAACCAGTACAGGCCAATTTTTTTACTCAAGTTCCACTCTCAATACCGATGATGGGGTTAATGAG CGTTTATACGGTCAAAGGGA
Downstream 100 bases:
>100_bases GCCAGATCTGGTGATCTTTTTTGATGGACAATGTCCGCTCTGTTGTAACGAGATGCGCGCATTAAAAACGGCGGATCACC AAGCACGAATTTTGCTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 30; Mature: 29
Protein sequence:
>30_residues MSDHAVMGLILEKRVCVTDCNDESEVNSHE
Sequences:
>Translated_30_residues MSDHAVMGLILEKRVCVTDCNDESEVNSHE >Mature_29_residues SDHAVMGLILEKRVCVTDCNDESEVNSHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3362; Mature: 3231
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.7 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 13.3 %Cys+Met (Translated Protein) 6.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHAVMGLILEKRVCVTDCNDESEVNSHE CCCCHHHHHHCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure SDHAVMGLILEKRVCVTDCNDESEVNSHE CCCHHHHHHCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA