Click here to switch to the map view.

The map label for this gene is 227081907

Identifier: 227081907

GI number: 227081907

Start: 1848583

End: 1850034

Strand: Reverse

Name: 227081907

Synonym: VCM66_1700

Alternate gene names: NA

Gene position: 1850034-1848583 (Counterclockwise)

Preceding gene: 227081908

Following gene: 227081906

Centisome position: 63.96

GC content: 40.63

Gene sequence:

>1452_bases
GTGAGTCTAAATATAAAAAAGCTCAAAGTTAGTTTGCCTGCTAATCCTTTTGGTCAAGCCATCAAGGACTTTGCACATCT
ATCGAGTCAGCTAGAAGTGCTTTCTAAGAGTGCCGGTATTGAAAACAATAAGTTCCGAACTGCATATGGAGAAGTATGTA
ATGCGCTTGCCTCTAAGAAAAGAGTTGAGGACGTTATAGATAGCTCTGTACACGTTCGCGCCTTAGCTCTTTCGCTACAT
ACGGATGCGAAGAAAAATGTCAGCTTTACGCGCAGATTGCTTAATAAAATTACAGAAATTGTAAAAAAACCAAGCTCTTT
AGTCATAGAGTCGTTTTATCAGCATTTCTTATCAGAGTATGACCGACTGGCAGACTTGGAAGCTACAGCAGACTGGTTGT
TGGAGGCTAAAAGGCTGCGAGGCAATGATGAGCAGTTTGATGAAAATATATTGTCAACCAATGGCCCCAAGTGGCTTGCG
GAAAGGGCTATTCAAAATAATGTCGATTTTGATCATTTAATTGCGGAGATGAAGCTGGAACGTTATGCAAATGGCAGATA
TTTAACGGCGGCTAAAGGCATCTACTATATTGAGCAGTTAAACACTATACCATTAGGCCAAGATCATCCTCTCCTAGAGG
AGGTTCAAAAAACGGTGGTTTTTGATTCTCGATATGACTCTGAAAGTTTGTTAGGGCATCAAATTCTTAGAATTTTGATT
GGCCGATCGATAGGTTCTCACATCAGTGAGCCTTGGATGAATGTGATCTTAGCAATTGGCGGTGACCCACGAGTACCAAG
TTCAAATCCAAGATATATTAAGTGGTGGAAGAGTTTAGAACCAAATCTGGTTCAAGCTGTTCTCGGATGGTTATCAAAAC
TAGACTTGAAGTTGTTTCTGGAAGCGTTGGAGGATTATTCTTACTCTTCAGCTAATTACGAGCTACAGAGAATGTACCCA
TCTCGGAAAAGTTTCTTAGAGGGGATGTTCGATGCGGGGGTTATTTCAAATACCCGGCTTTATTTGAGTCTGGATGCTGC
AAGGTATTTGAAGAGAAATTATGACCCTAAGCACTTGCCAAATTTCTCTACTGTTAAAGATGGTGACAAATCGATAATTT
ATGTGCAAATGAACGGCGCTCACATGGTTGAGGGGAGCCATAGTTGTTATTTGTGGTTGTACCGGTATCTTGACCCTTCC
GTTTGTGTGTTTAACTATAACATTGATAGTCCTACGTACTCACAACTCACAATCGGTATAAACAATCAAATGTCCAGATT
GTCATCTGGTGCAGTTGCTAAAATAACGCACTCTCCGAGTGGTTACGCATGGCAACGAAAAGCACTTATAGCACTAAGAG
AGTTAGGTGTTAAATTGACGCCGAAAGATGTGCTTTCGAATGAAGATTATATTGATTTTAAACAACGTTATGGGGTGCGA
GAGTGGAGTTAA

Upstream 100 bases:

>100_bases
ATGAGGCGAATCAGCAAGAAAAGAGCCAGAATAGGCGCATTGATATTCGATTTACAGTTAAGAAACCATCTATTGCTGAG
CTCGAGAGGATTGTTGGACC

Downstream 100 bases:

>100_bases
CCTCTTTAATCAGCAAGTTCTTCTCTAGCTCAGATAAAACGTCTCAGTTTGAACTCATTTGTGATGATAGTCTTGATTTT
GCAACTTCCAGAAAAACTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MSLNIKKLKVSLPANPFGQAIKDFAHLSSQLEVLSKSAGIENNKFRTAYGEVCNALASKKRVEDVIDSSVHVRALALSLH
TDAKKNVSFTRRLLNKITEIVKKPSSLVIESFYQHFLSEYDRLADLEATADWLLEAKRLRGNDEQFDENILSTNGPKWLA
ERAIQNNVDFDHLIAEMKLERYANGRYLTAAKGIYYIEQLNTIPLGQDHPLLEEVQKTVVFDSRYDSESLLGHQILRILI
GRSIGSHISEPWMNVILAIGGDPRVPSSNPRYIKWWKSLEPNLVQAVLGWLSKLDLKLFLEALEDYSYSSANYELQRMYP
SRKSFLEGMFDAGVISNTRLYLSLDAARYLKRNYDPKHLPNFSTVKDGDKSIIYVQMNGAHMVEGSHSCYLWLYRYLDPS
VCVFNYNIDSPTYSQLTIGINNQMSRLSSGAVAKITHSPSGYAWQRKALIALRELGVKLTPKDVLSNEDYIDFKQRYGVR
EWS

Sequences:

>Translated_483_residues
MSLNIKKLKVSLPANPFGQAIKDFAHLSSQLEVLSKSAGIENNKFRTAYGEVCNALASKKRVEDVIDSSVHVRALALSLH
TDAKKNVSFTRRLLNKITEIVKKPSSLVIESFYQHFLSEYDRLADLEATADWLLEAKRLRGNDEQFDENILSTNGPKWLA
ERAIQNNVDFDHLIAEMKLERYANGRYLTAAKGIYYIEQLNTIPLGQDHPLLEEVQKTVVFDSRYDSESLLGHQILRILI
GRSIGSHISEPWMNVILAIGGDPRVPSSNPRYIKWWKSLEPNLVQAVLGWLSKLDLKLFLEALEDYSYSSANYELQRMYP
SRKSFLEGMFDAGVISNTRLYLSLDAARYLKRNYDPKHLPNFSTVKDGDKSIIYVQMNGAHMVEGSHSCYLWLYRYLDPS
VCVFNYNIDSPTYSQLTIGINNQMSRLSSGAVAKITHSPSGYAWQRKALIALRELGVKLTPKDVLSNEDYIDFKQRYGVR
EWS
>Mature_482_residues
SLNIKKLKVSLPANPFGQAIKDFAHLSSQLEVLSKSAGIENNKFRTAYGEVCNALASKKRVEDVIDSSVHVRALALSLHT
DAKKNVSFTRRLLNKITEIVKKPSSLVIESFYQHFLSEYDRLADLEATADWLLEAKRLRGNDEQFDENILSTNGPKWLAE
RAIQNNVDFDHLIAEMKLERYANGRYLTAAKGIYYIEQLNTIPLGQDHPLLEEVQKTVVFDSRYDSESLLGHQILRILIG
RSIGSHISEPWMNVILAIGGDPRVPSSNPRYIKWWKSLEPNLVQAVLGWLSKLDLKLFLEALEDYSYSSANYELQRMYPS
RKSFLEGMFDAGVISNTRLYLSLDAARYLKRNYDPKHLPNFSTVKDGDKSIIYVQMNGAHMVEGSHSCYLWLYRYLDPSV
CVFNYNIDSPTYSQLTIGINNQMSRLSSGAVAKITHSPSGYAWQRKALIALRELGVKLTPKDVLSNEDYIDFKQRYGVRE
WS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55077; Mature: 54946

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNIKKLKVSLPANPFGQAIKDFAHLSSQLEVLSKSAGIENNKFRTAYGEVCNALASKK
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RVEDVIDSSVHVRALALSLHTDAKKNVSFTRRLLNKITEIVKKPSSLVIESFYQHFLSEY
HHHHHHCCCCEEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
DRLADLEATADWLLEAKRLRGNDEQFDENILSTNGPKWLAERAIQNNVDFDHLIAEMKLE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
RYANGRYLTAAKGIYYIEQLNTIPLGQDHPLLEEVQKTVVFDSRYDSESLLGHQILRILI
HHCCCCEEEECCCEEEEHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GRSIGSHISEPWMNVILAIGGDPRVPSSNPRYIKWWKSLEPNLVQAVLGWLSKLDLKLFL
HHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHH
EALEDYSYSSANYELQRMYPSRKSFLEGMFDAGVISNTRLYLSLDAARYLKRNYDPKHLP
HHHHHCCCCCCCEEHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHCCCCCCCCC
NFSTVKDGDKSIIYVQMNGAHMVEGSHSCYLWLYRYLDPSVCVFNYNIDSPTYSQLTIGI
CCCCCCCCCCEEEEEEECCCEEECCCCCEEEHHHHHCCCCEEEEEECCCCCCCCEEEEEC
NNQMSRLSSGAVAKITHSPSGYAWQRKALIALRELGVKLTPKDVLSNEDYIDFKQRYGVR
CHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHCCCC
EWS
CCC
>Mature Secondary Structure 
SLNIKKLKVSLPANPFGQAIKDFAHLSSQLEVLSKSAGIENNKFRTAYGEVCNALASKK
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RVEDVIDSSVHVRALALSLHTDAKKNVSFTRRLLNKITEIVKKPSSLVIESFYQHFLSEY
HHHHHHCCCCEEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
DRLADLEATADWLLEAKRLRGNDEQFDENILSTNGPKWLAERAIQNNVDFDHLIAEMKLE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
RYANGRYLTAAKGIYYIEQLNTIPLGQDHPLLEEVQKTVVFDSRYDSESLLGHQILRILI
HHCCCCEEEECCCEEEEHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GRSIGSHISEPWMNVILAIGGDPRVPSSNPRYIKWWKSLEPNLVQAVLGWLSKLDLKLFL
HHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHH
EALEDYSYSSANYELQRMYPSRKSFLEGMFDAGVISNTRLYLSLDAARYLKRNYDPKHLP
HHHHHCCCCCCCEEHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHCCCCCCCCC
NFSTVKDGDKSIIYVQMNGAHMVEGSHSCYLWLYRYLDPSVCVFNYNIDSPTYSQLTIGI
CCCCCCCCCCEEEEEEECCCEEECCCCCEEEHHHHHCCCCEEEEEECCCCCCCCEEEEEC
NNQMSRLSSGAVAKITHSPSGYAWQRKALIALRELGVKLTPKDVLSNEDYIDFKQRYGVR
CHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHCCCC
EWS
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA