| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
Click here to switch to the map view.
The map label for this gene is yghG [C]
Identifier: 227081852
GI number: 227081852
Start: 1781443
End: 1781934
Strand: Direct
Name: yghG [C]
Synonym: VCM66_1643
Alternate gene names: 227081852
Gene position: 1781443-1781934 (Clockwise)
Preceding gene: 227081851
Following gene: 227081854
Centisome position: 61.59
GC content: 50.0
Gene sequence:
>492_bases TTGAAGCACAAGCTTGGGCGGATGCCGATCCTTATGTCGCGGCGGGTGTTTATGCCAACGTCATTGTTAAACCTTTCAAA AAAGTATTCTGATATGAAAAAAATCGTCCTGAGCAGCGTTATCGCCTCGACTCTCCTTCTCGTCGGTTGCAGCTCTGGCT CAGCAGAAAAACAGCGTAACCTTGAGCTATTGGCGGGTAACCGCGCCAGCTTACTCTCGACCGAGTTACCATTGGAGTTT GGCCCACTGAATATTCTCCGTGCTACCGCCAAAGGCAGTACTGTTGAGCTAATGATGGTGTACAACACGGATGCCAATAA CGCCAAACCGACCGAGCAAGTACTGCAAAGCGCGGTCAGCAGCTTCTGTGCTAACAAAGACATCCGTTCGAATCTGGATG TTGGGATCAGCTACCGCATCCAAATGCGCAACACGCGTGGTCAATTAATGGCCGATCAGTTGGTCACGAAAGAGAGCTGC AAGCAAGGTTAA
Upstream 100 bases:
>100_bases CGTCTGCTCACTGCAGGCCCCATGCCAGCCATCGATTCCGAAAATCCGGGACAGGCAGGCTTTACTGGCTCAACCGTGAT CGCGGAGTTCGCCTCCTTAG
Downstream 100 bases:
>100_bases GCGAGTTTACAGTCATCGAGCTATACCCAAACTCATTGGTGCGGCAGGTAGTCAGCAAGTGAGTTCATCCCCATGAGCAT AGATACATTATGTGATTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKHKLGRMPILMSRRVFMPTSLLNLSKKYSDMKKIVLSSVIASTLLLVGCSSGSAEKQRNLELLAGNRASLLSTELPLEF GPLNILRATAKGSTVELMMVYNTDANNAKPTEQVLQSAVSSFCANKDIRSNLDVGISYRIQMRNTRGQLMADQLVTKESC KQG
Sequences:
>Translated_163_residues MKHKLGRMPILMSRRVFMPTSLLNLSKKYSDMKKIVLSSVIASTLLLVGCSSGSAEKQRNLELLAGNRASLLSTELPLEF GPLNILRATAKGSTVELMMVYNTDANNAKPTEQVLQSAVSSFCANKDIRSNLDVGISYRIQMRNTRGQLMADQLVTKESC KQG >Mature_163_residues MKHKLGRMPILMSRRVFMPTSLLNLSKKYSDMKKIVLSSVIASTLLLVGCSSGSAEKQRNLELLAGNRASLLSTELPLEF GPLNILRATAKGSTVELMMVYNTDANNAKPTEQVLQSAVSSFCANKDIRSNLDVGISYRIQMRNTRGQLMADQLVTKESC KQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Attached to the membrane by a lipid anchor (Potential) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17925; Mature: 17925
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHKLGRMPILMSRRVFMPTSLLNLSKKYSDMKKIVLSSVIASTLLLVGCSSGSAEKQRN CCCCCCCCCHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC LELLAGNRASLLSTELPLEFGPLNILRATAKGSTVELMMVYNTDANNAKPTEQVLQSAVS EEEEECCCHHHHCCCCCCCCCCHHHEEECCCCCEEEEEEEEECCCCCCCCHHHHHHHHHH SFCANKDIRSNLDVGISYRIQMRNTRGQLMADQLVTKESCKQG HHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKHKLGRMPILMSRRVFMPTSLLNLSKKYSDMKKIVLSSVIASTLLLVGCSSGSAEKQRN CCCCCCCCCHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC LELLAGNRASLLSTELPLEFGPLNILRATAKGSTVELMMVYNTDANNAKPTEQVLQSAVS EEEEECCCHHHHCCCCCCCCCCHHHEEECCCCCEEEEEEEEECCCCCCCCHHHHHHHHHH SFCANKDIRSNLDVGISYRIQMRNTRGQLMADQLVTKESCKQG HHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA