| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081845
Identifier: 227081845
GI number: 227081845
Start: 1777451
End: 1777831
Strand: Direct
Name: 227081845
Synonym: VCM66_1636
Alternate gene names: NA
Gene position: 1777451-1777831 (Clockwise)
Preceding gene: 227081840
Following gene: 227081846
Centisome position: 61.45
GC content: 47.51
Gene sequence:
>381_bases TTGTGCTGTTGTTCAAAACATTTTCCTCATCTTGCGCTGAAAAAAACACCAGATCGGGTCAAGCTAACAGTTCTGCGAGC ACAAGATTGCGTGTTGATGCTGCGCAGCCTATTGTTGCCGCAACAACAGCTTAAAAAGGTAATAGCCATGAAATTCACTC AACAGCACATCGATGAGCTTAATTTACTGCTGCAATTTGATTTGAGCAGCGCAGCGACTGGCATCAAAGTGCACCACGAT GCGTCTGAAGCGGTACAAGCCGCTGTGGTTCGTCTGTATAACAAAGGCTTATGTACTCAACCTGATGGTGGTTACCTCAC CGATGAAGGCATCGAGATTGCCGAACACGCTGACCGCGTACTGCGTGTACTGAACGCGTAA
Upstream 100 bases:
>100_bases ACCCGTCCTACTTGGAGTCACAGCGCGGTTTTCTCCGTCTATTCACCTCAACTTTCGCGTTCGGTGGTCACCTTAACCTT CACTCCTCTCGCCGTGAATT
Downstream 100 bases:
>100_bases TCCTGTTTTGAATGAGCGCTTTACTGCGCTCATTGCCTTTCTTCCTTGATTCCAACTGTGTTACGGTAGCCACCTCATTC GCTCTTAGATAAAGGATGAA
Product: DNA-binding protein inhibitor Id-2-related protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MCCCSKHFPHLALKKTPDRVKLTVLRAQDCVLMLRSLLLPQQQLKKVIAMKFTQQHIDELNLLLQFDLSSAATGIKVHHD ASEAVQAAVVRLYNKGLCTQPDGGYLTDEGIEIAEHADRVLRVLNA
Sequences:
>Translated_126_residues MCCCSKHFPHLALKKTPDRVKLTVLRAQDCVLMLRSLLLPQQQLKKVIAMKFTQQHIDELNLLLQFDLSSAATGIKVHHD ASEAVQAAVVRLYNKGLCTQPDGGYLTDEGIEIAEHADRVLRVLNA >Mature_126_residues MCCCSKHFPHLALKKTPDRVKLTVLRAQDCVLMLRSLLLPQQQLKKVIAMKFTQQHIDELNLLLQFDLSSAATGIKVHHD ASEAVQAAVVRLYNKGLCTQPDGGYLTDEGIEIAEHADRVLRVLNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14060; Mature: 14060
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCCCSKHFPHLALKKTPDRVKLTVLRAQDCVLMLRSLLLPQQQLKKVIAMKFTQQHIDEL CCCCCCCCCCCEECCCCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH NLLLQFDLSSAATGIKVHHDASEAVQAAVVRLYNKGLCTQPDGGYLTDEGIEIAEHADRV HHHHEECCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHH LRVLNA HHHHCC >Mature Secondary Structure MCCCSKHFPHLALKKTPDRVKLTVLRAQDCVLMLRSLLLPQQQLKKVIAMKFTQQHIDEL CCCCCCCCCCCEECCCCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH NLLLQFDLSSAATGIKVHHDASEAVQAAVVRLYNKGLCTQPDGGYLTDEGIEIAEHADRV HHHHEECCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHH LRVLNA HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA