Click here to switch to the map view.

The map label for this gene is yihX [C]

Identifier: 227081797

GI number: 227081797

Start: 1718957

End: 1719568

Strand: Reverse

Name: yihX [C]

Synonym: VCM66_1584

Alternate gene names: 227081797

Gene position: 1719568-1718957 (Counterclockwise)

Preceding gene: 227081798

Following gene: 227081794

Centisome position: 59.45

GC content: 45.92

Gene sequence:

>612_bases
GTGATGGCAATCCGTAATGTGGTATTTGATGTTGGTAATGTGATCGTAAAATGGGCACCACAAGACATTGCCCAACTGAC
GTTTGGTGAGGGAGAAGAGAGTGCCTTCATGGCAACGGCTGTATTTAAAAGTGAGTTCTGGCGCGATTTGAATAAAGGAA
AATACACTGAAGCGGAAGTGAAACGCGCACTCCATCAGCAATTAGGACTTTCCTCTGACACTCTAGAACAACTCTTTTTC
CATATTAAAAATACCCAAGTTTTGCTGCCCGGAACCTTGCAATTAATGGATGATCTCCTCAAAGCAGGTTATCGCCTCTA
CGCGTTGACCGACAATGTGAACGAGATTGTCGCTTACTTAAAAAAACAATATGGCTTTTGGCCCAAATTTACTGGCGCAG
TAGTGTCGAGTGAGTGTGGTTTGCTTAAACCTGATCCGGCGATTTACCAGCATCTGGCAGACTCCCAGCGCATTCTCCCG
CAAGAAAGTGTCTTTATGGATGATATGCCAGCCAATGTCGAGGGGGCGCGCCAACAAGGATTTCATGCCATTCAATTTGT
TGATGCGCACCAAGCAAGAGTGCAGCTAGCGCAAATGGGGCTGCACTTTTAA

Upstream 100 bases:

>100_bases
GCTTCTTTACTACCTGCGTAGGGTGACTTTGTGAGCACATAGCCAATAATGTACAGCTGAGTTCGCTAAACTCTTTCCCT
CACTGAATGAATAGGAGAGG

Downstream 100 bases:

>100_bases
AGGTCAGCACTTTGGCTAAAAAGATGAATACTTGATGTGGTAACGTCAAGCCGTTTGGTTAGCGCAATGAATAGGGCAGG
TGAAAAACCTGCCCTATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: HAD-Superfamily Hydrolase; HAD Superfamily Hydrolase; Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Alpha Beta Hydrolase; HAD Family Phosphatase; 2-Haloacid Dehalogenase; HAD Hydrolase Family IA; Haloacid Dehalogenase Superfamily Protein; Hydrolase Protein; HAD Superfamily Protein; Hydrolase Family Protein; HAD-Superfamily Hydrolase Subfamily IA; Had Superfamily Hydrolase; Haloacid Dehalogenase Domain Protein Hydrolase; Haloacid Dehalogenase-Like Hydrolase Protein; Hydrolase Haloacid Dehalogenase-Like Family Protein; HAD Hydrolase Superfamily Protein

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MMAIRNVVFDVGNVIVKWAPQDIAQLTFGEGEESAFMATAVFKSEFWRDLNKGKYTEAEVKRALHQQLGLSSDTLEQLFF
HIKNTQVLLPGTLQLMDDLLKAGYRLYALTDNVNEIVAYLKKQYGFWPKFTGAVVSSECGLLKPDPAIYQHLADSQRILP
QESVFMDDMPANVEGARQQGFHAIQFVDAHQARVQLAQMGLHF

Sequences:

>Translated_203_residues
MMAIRNVVFDVGNVIVKWAPQDIAQLTFGEGEESAFMATAVFKSEFWRDLNKGKYTEAEVKRALHQQLGLSSDTLEQLFF
HIKNTQVLLPGTLQLMDDLLKAGYRLYALTDNVNEIVAYLKKQYGFWPKFTGAVVSSECGLLKPDPAIYQHLADSQRILP
QESVFMDDMPANVEGARQQGFHAIQFVDAHQARVQLAQMGLHF
>Mature_203_residues
MMAIRNVVFDVGNVIVKWAPQDIAQLTFGEGEESAFMATAVFKSEFWRDLNKGKYTEAEVKRALHQQLGLSSDTLEQLFF
HIKNTQVLLPGTLQLMDDLLKAGYRLYALTDNVNEIVAYLKKQYGFWPKFTGAVVSSECGLLKPDPAIYQHLADSQRILP
QESVFMDDMPANVEGARQQGFHAIQFVDAHQARVQLAQMGLHF

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082345, Length=197, Percent_Identity=26.9035532994924, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17562446, Length=228, Percent_Identity=25, Blast_Score=68, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22925; Mature: 22925

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAIRNVVFDVGNVIVKWAPQDIAQLTFGEGEESAFMATAVFKSEFWRDLNKGKYTEAEV
CCHHHHHHHHHHHHHEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
KRALHQQLGLSSDTLEQLFFHIKNTQVLLPGTLQLMDDLLKAGYRLYALTDNVNEIVAYL
HHHHHHHHCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCEEEEEEECCHHHHHHHH
KKQYGFWPKFTGAVVSSECGLLKPDPAIYQHLADSQRILPQESVFMDDMPANVEGARQQG
HHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHCC
FHAIQFVDAHQARVQLAQMGLHF
CCCEEHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMAIRNVVFDVGNVIVKWAPQDIAQLTFGEGEESAFMATAVFKSEFWRDLNKGKYTEAEV
CCHHHHHHHHHHHHHEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
KRALHQQLGLSSDTLEQLFFHIKNTQVLLPGTLQLMDDLLKAGYRLYALTDNVNEIVAYL
HHHHHHHHCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCEEEEEEECCHHHHHHHH
KKQYGFWPKFTGAVVSSECGLLKPDPAIYQHLADSQRILPQESVFMDDMPANVEGARQQG
HHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHCC
FHAIQFVDAHQARVQLAQMGLHF
CCCEEHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA