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The map label for this gene is katB [C]

Identifier: 227081738

GI number: 227081738

Start: 1644305

End: 1646008

Strand: Reverse

Name: katB [C]

Synonym: VCM66_1525

Alternate gene names: 227081738

Gene position: 1646008-1644305 (Counterclockwise)

Preceding gene: 227081739

Following gene: 227081737

Centisome position: 56.91

GC content: 44.95

Gene sequence:

>1704_bases
TTGATAAGTAAAAATATGAGAAGTCATCTAAAACTTTCGTTTAAATCGATTTTCTCTATTAAATTCATCGTTATTTCCCA
TTTAGTGAAAAGGGTTATTTACCCTTATATTCTCGCTGGGCAGAAAAGAGCTTTTGATTTCTTCATTCTCCGCAACGTCG
GTCAGAATGGCAGGTCGCATTGGAGAGCAACCATGCATATGTCAAAAAGCTTTTTAATTATTTCAATGGGTTTTGTGGCG
GTATCCGTACAGGCACAAACTCTTACGCGAGACAACGGTGCGCCAGTTGGCGATAACCAAAACTCCATCACGGCAGGTGA
GCATGGCAGTGTATTGCTGCAAGATGTTCATCTGATCCAAAAATTGCAGCGTTTTGCCAGAGAACGTATTCCTGAGCGGG
TAGTGCATGCCAGAGGAACTGGCGCACATGGTGAGTTTGTCGCATCCGGTGATTTTAGTGATCTGACACTCTCCGCGCCG
TTTACCAGCAAAGGCAAAATCACACCGGTATTTGTGCGTTTTTCAACGGTGATTCACTCAAAAGGTTCGCCAGAAACGCT
GCGCGATCCGCGAGGTTTTGCGACCAAATTTTATACCGAACAAGGCAACTGGGATTTGGTAGGGAACAACCTGCCTGTGT
TCTTCATTCGTGATTCGATCAAGTTTCCGGATATGGTTCACTCGCTGAAACCATCACCCGTCACCAATCTTCAGGATCCG
AATCGCTTTTTTGATTTTTTCAGTCATGAGCCAGGGTCTACACATATGTTGACTTGGGTGTATACCAACTTAGGTACACC
GGCAAGCTATCGAACCATGGATGGTTTTGGTGTTCATGCTTATAAATGGATCAATCAAAAAGGCGATGTGAACTACGTGA
AATTCCATTGGAAAAGCCTGCAAGGAATTGAAAGTTTGCGCCCTGATGAGGTCGTCAAAGTTCAAGGACAGTACTTTAAC
CATTTAACGAATGATCTCTACACACAAATTAATGCGGGTAATCACCCCAAATGGGATCTTTATGTTCAGGTGTTGACACC
AGAACAACTGAGCAAACTGGATTACAACGGCTTAGATGCCACCAAGGTATGGTTGGATGTGCCGGAGAAGAAAGTCGGTA
CGATGACCTTGAACAAAGTACCTGACAACTTCTTTTTGGAAACCGAACAGTCGGCATTTGCGCCATCAAACCTAATTCCT
GGTATTGAGCCATCGGAAGACCGTCTGTTGCAGGGGCGTTTATTTGCGTATGCCGATACACAGCTTTATCGCTTAGGTGC
CAATTTGTTCCAACTGCCAATTAACCGCCCATTGGTTGAGGTGAACAGCCATAACCAAGAGGGCGCGAGTAACAGTGCAC
AAACGGCTTCAGACATTAACTACCAACCCAGTCGTAAGCTTGAATTGAAAGAGGACCCTCAATTTAAAGCGGTACAAACG
CAGTTGGTTGGAAGTGTTCAGCAAAAAGCGATCAGCAATCCGCGTAACTTTTATCAAGCAGGTGTGCTCTATCGCAGCTT
AAATGAACAGGACAAACAAGACCTTATCACCAACTTGGCGGGCGACTTAAACAAAGTCACGGACAAAGAGATCAAAGCTA
CTATGGTCAGCCATTTCTACCGAGCGGATAAGGATTACGGTACTCGCTTAGCTCGTGCGACCAATACCGATTTGAAACAG
GTGGCAAAACTGGCCGCGATGTAA

Upstream 100 bases:

>100_bases
CATGCTTAAAAAACGCCCGAGAATAGAGAGCTAATTTAACCATCTCTAATAAATGGTTCTGTGAACCAATATCACAAATA
TTGGCTTAAAATAATGACGG

Downstream 100 bases:

>100_bases
CCGATAAAAATTTGCCCCGCAAGAGATAAATCCGCTCTTTTCTGCCCAGAAAATAGGGCTCTTGTGGGGCATTCACTATG
GCAAAGGAGAGGAATGATGA

Product: catalase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MISKNMRSHLKLSFKSIFSIKFIVISHLVKRVIYPYILAGQKRAFDFFILRNVGQNGRSHWRATMHMSKSFLIISMGFVA
VSVQAQTLTRDNGAPVGDNQNSITAGEHGSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHGEFVASGDFSDLTLSAP
FTSKGKITPVFVRFSTVIHSKGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDP
NRFFDFFSHEPGSTHMLTWVYTNLGTPASYRTMDGFGVHAYKWINQKGDVNYVKFHWKSLQGIESLRPDEVVKVQGQYFN
HLTNDLYTQINAGNHPKWDLYVQVLTPEQLSKLDYNGLDATKVWLDVPEKKVGTMTLNKVPDNFFLETEQSAFAPSNLIP
GIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPINRPLVEVNSHNQEGASNSAQTASDINYQPSRKLELKEDPQFKAVQT
QLVGSVQQKAISNPRNFYQAGVLYRSLNEQDKQDLITNLAGDLNKVTDKEIKATMVSHFYRADKDYGTRLARATNTDLKQ
VAKLAAM

Sequences:

>Translated_567_residues
MISKNMRSHLKLSFKSIFSIKFIVISHLVKRVIYPYILAGQKRAFDFFILRNVGQNGRSHWRATMHMSKSFLIISMGFVA
VSVQAQTLTRDNGAPVGDNQNSITAGEHGSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHGEFVASGDFSDLTLSAP
FTSKGKITPVFVRFSTVIHSKGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDP
NRFFDFFSHEPGSTHMLTWVYTNLGTPASYRTMDGFGVHAYKWINQKGDVNYVKFHWKSLQGIESLRPDEVVKVQGQYFN
HLTNDLYTQINAGNHPKWDLYVQVLTPEQLSKLDYNGLDATKVWLDVPEKKVGTMTLNKVPDNFFLETEQSAFAPSNLIP
GIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPINRPLVEVNSHNQEGASNSAQTASDINYQPSRKLELKEDPQFKAVQT
QLVGSVQQKAISNPRNFYQAGVLYRSLNEQDKQDLITNLAGDLNKVTDKEIKATMVSHFYRADKDYGTRLARATNTDLKQ
VAKLAAM
>Mature_567_residues
MISKNMRSHLKLSFKSIFSIKFIVISHLVKRVIYPYILAGQKRAFDFFILRNVGQNGRSHWRATMHMSKSFLIISMGFVA
VSVQAQTLTRDNGAPVGDNQNSITAGEHGSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHGEFVASGDFSDLTLSAP
FTSKGKITPVFVRFSTVIHSKGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDP
NRFFDFFSHEPGSTHMLTWVYTNLGTPASYRTMDGFGVHAYKWINQKGDVNYVKFHWKSLQGIESLRPDEVVKVQGQYFN
HLTNDLYTQINAGNHPKWDLYVQVLTPEQLSKLDYNGLDATKVWLDVPEKKVGTMTLNKVPDNFFLETEQSAFAPSNLIP
GIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPINRPLVEVNSHNQEGASNSAQTASDINYQPSRKLELKEDPQFKAVQT
QLVGSVQQKAISNPRNFYQAGVLYRSLNEQDKQDLITNLAGDLNKVTDKEIKATMVSHFYRADKDYGTRLARATNTDLKQ
VAKLAAM

Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]

COG id: COG0753

COG function: function code P; Catalase

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the catalase family [H]

Homologues:

Organism=Homo sapiens, GI4557014, Length=472, Percent_Identity=41.7372881355932, Blast_Score=368, Evalue=1e-102,
Organism=Escherichia coli, GI48994891, Length=488, Percent_Identity=39.1393442622951, Blast_Score=347, Evalue=1e-96,
Organism=Caenorhabditis elegans, GI25147792, Length=471, Percent_Identity=41.1889596602972, Blast_Score=387, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI25151141, Length=471, Percent_Identity=40.9766454352442, Blast_Score=384, Evalue=1e-107,
Organism=Caenorhabditis elegans, GI71998444, Length=472, Percent_Identity=41.5254237288136, Blast_Score=382, Evalue=1e-106,
Organism=Saccharomyces cerevisiae, GI6320462, Length=482, Percent_Identity=39.4190871369295, Blast_Score=327, Evalue=4e-90,
Organism=Saccharomyces cerevisiae, GI6321525, Length=503, Percent_Identity=36.779324055666, Blast_Score=320, Evalue=5e-88,
Organism=Drosophila melanogaster, GI17981717, Length=482, Percent_Identity=40.8713692946058, Blast_Score=364, Evalue=1e-101,
Organism=Drosophila melanogaster, GI19920968, Length=479, Percent_Identity=37.9958246346555, Blast_Score=340, Evalue=2e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002226
- InterPro:   IPR020835
- InterPro:   IPR010582
- InterPro:   IPR018028
- InterPro:   IPR011614 [H]

Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]

EC number: =1.11.1.6 [H]

Molecular weight: Translated: 64110; Mature: 64110

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKNMRSHLKLSFKSIFSIKFIVISHLVKRVIYPYILAGQKRAFDFFILRNVGQNGRSH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHCCCCCHHH
WRATMHMSKSFLIISMGFVAVSVQAQTLTRDNGAPVGDNQNSITAGEHGSVLLQDVHLIQ
HHHHHHCCCCEEEEEECEEEEEEEHHEEECCCCCCCCCCCCCEECCCCCCHHHHHHHHHH
KLQRFARERIPERVVHARGTGAHGEFVASGDFSDLTLSAPFTSKGKITPVFVRFSTVIHS
HHHHHHHHHCHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCCEEEEEEEEEHHHCC
KGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDP
CCCCCHHCCCCCCEEEEEECCCCEEEECCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCC
NRFFDFFSHEPGSTHMLTWVYTNLGTPASYRTMDGFGVHAYKWINQKGDVNYVKFHWKSL
HHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEHHH
QGIESLRPDEVVKVQGQYFNHLTNDLYTQINAGNHPKWDLYVQVLTPEQLSKLDYNGLDA
HHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHCCCCCCCC
TKVWLDVPEKKVGTMTLNKVPDNFFLETEQSAFAPSNLIPGIEPSEDRLLQGRLFAYADT
EEEEEECCCCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHCEEEEEECH
QLYRLGANLFQLPINRPLVEVNSHNQEGASNSAQTASDINYQPSRKLELKEDPQFKAVQT
HHHHHCCCCEECCCCCCEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHH
QLVGSVQQKAISNPRNFYQAGVLYRSLNEQDKQDLITNLAGDLNKVTDKEIKATMVSHFY
HHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RADKDYGTRLARATNTDLKQVAKLAAM
HCCHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MISKNMRSHLKLSFKSIFSIKFIVISHLVKRVIYPYILAGQKRAFDFFILRNVGQNGRSH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHCCCCCHHH
WRATMHMSKSFLIISMGFVAVSVQAQTLTRDNGAPVGDNQNSITAGEHGSVLLQDVHLIQ
HHHHHHCCCCEEEEEECEEEEEEEHHEEECCCCCCCCCCCCCEECCCCCCHHHHHHHHHH
KLQRFARERIPERVVHARGTGAHGEFVASGDFSDLTLSAPFTSKGKITPVFVRFSTVIHS
HHHHHHHHHCHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCCEEEEEEEEEHHHCC
KGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDP
CCCCCHHCCCCCCEEEEEECCCCEEEECCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCC
NRFFDFFSHEPGSTHMLTWVYTNLGTPASYRTMDGFGVHAYKWINQKGDVNYVKFHWKSL
HHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEHHH
QGIESLRPDEVVKVQGQYFNHLTNDLYTQINAGNHPKWDLYVQVLTPEQLSKLDYNGLDA
HHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHCCCCCCCC
TKVWLDVPEKKVGTMTLNKVPDNFFLETEQSAFAPSNLIPGIEPSEDRLLQGRLFAYADT
EEEEEECCCCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHCEEEEEECH
QLYRLGANLFQLPINRPLVEVNSHNQEGASNSAQTASDINYQPSRKLELKEDPQFKAVQT
HHHHHCCCCEECCCCCCEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHH
QLVGSVQQKAISNPRNFYQAGVLYRSLNEQDKQDLITNLAGDLNKVTDKEIKATMVSHFY
HHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RADKDYGTRLARATNTDLKQVAKLAAM
HCCHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]