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The map label for this gene is ankB

Identifier: 227081737

GI number: 227081737

Start: 1643675

End: 1644241

Strand: Reverse

Name: ankB

Synonym: VCM66_1524

Alternate gene names: NA

Gene position: 1644241-1643675 (Counterclockwise)

Preceding gene: 227081738

Following gene: 227081736

Centisome position: 56.84

GC content: 46.91

Gene sequence:

>567_bases
GTGGGGCATTCACTATGGCAAAGGAGAGGAATGATGAAATGGCTATGGCAGCTCGCCCTAATCGGCTTATTAGTACTATC
CCCTTTTAGATTGAGTGTAGCGGCTTCGGAGCCGTCTGGTACTGCACGGTCAGATACAAGCCAAGAGTACCAGTCTCTGA
TCTCACTCTTTTTCGCAGCAGTAAGGACAGGGAATGACGAAGTTGTGAATGAATTTCTCTCCGCTGGATTTCCGATTAAT
CAACGAAATGCGGAGAGCTATACCGCATTAATGGTTGCAGCCTACCAAGGCAACGCACAAACCGTGGAACTTTTACTACG
CTTTGGAGCGAATGCTTGTTTGCAAGATAAACGTGGTAATACGGCTTTAATGGGAGCTCTACTGAAGCGGGAAATCCAAA
TCGCGAGAGCTTTATACCAAGCAGAGTGTGCGGATAACCTTCGCAATAAAGCGGGACTCTCGGTGCAAGAATTTGCTGAG
TTGTACGGTCAATCTGAGACGTTAAAAGCGCTGCATCAAGAAAAATTGGCTGTGTCGTCTTCCACTCAATCACGACCTCT
CAACTAA

Upstream 100 bases:

>100_bases
CGATTTGAAACAGGTGGCAAAACTGGCCGCGATGTAACCGATAAAAATTTGCCCCGCAAGAGATAAATCCGCTCTTTTCT
GCCCAGAAAATAGGGCTCTT

Downstream 100 bases:

>100_bases
CTGTGTCTTACTCTCAAACCCTCAATAAGGATATCCATCATGAATCAATTTACTTTGTTTGCGGTCGCCGCGTTTTTTTC
TTCTTCGGTTTTGGCGCAAG

Product: ankB protein

Products: NA

Alternate protein names: AnkB Protein; Ankyrin Repeat-Containing Protein; Ankyrin-Like Protein; Ankyrin Repeat Protein; Ankyrin Domain Protein; Ankyrin Domain-Containing Protein; AnkB Protein Involved In Protection Against Oxygen; Secreted Protein

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MGHSLWQRRGMMKWLWQLALIGLLVLSPFRLSVAASEPSGTARSDTSQEYQSLISLFFAAVRTGNDEVVNEFLSAGFPIN
QRNAESYTALMVAAYQGNAQTVELLLRFGANACLQDKRGNTALMGALLKREIQIARALYQAECADNLRNKAGLSVQEFAE
LYGQSETLKALHQEKLAVSSSTQSRPLN

Sequences:

>Translated_188_residues
MGHSLWQRRGMMKWLWQLALIGLLVLSPFRLSVAASEPSGTARSDTSQEYQSLISLFFAAVRTGNDEVVNEFLSAGFPIN
QRNAESYTALMVAAYQGNAQTVELLLRFGANACLQDKRGNTALMGALLKREIQIARALYQAECADNLRNKAGLSVQEFAE
LYGQSETLKALHQEKLAVSSSTQSRPLN
>Mature_187_residues
GHSLWQRRGMMKWLWQLALIGLLVLSPFRLSVAASEPSGTARSDTSQEYQSLISLFFAAVRTGNDEVVNEFLSAGFPINQ
RNAESYTALMVAAYQGNAQTVELLLRFGANACLQDKRGNTALMGALLKREIQIARALYQAECADNLRNKAGLSVQEFAEL
YGQSETLKALHQEKLAVSSSTQSRPLN

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI157739945, Length=115, Percent_Identity=34.7826086956522, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322079, Length=86, Percent_Identity=41.8604651162791, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20729; Mature: 20598

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHSLWQRRGMMKWLWQLALIGLLVLSPFRLSVAASEPSGTARSDTSQEYQSLISLFFAA
CCCHHHHHCCHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHH
VRTGNDEVVNEFLSAGFPINQRNAESYTALMVAAYQGNAQTVELLLRFGANACLQDKRGN
HHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCC
TALMGALLKREIQIARALYQAECADNLRNKAGLSVQEFAELYGQSETLKALHQEKLAVSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHC
STQSRPLN
CCCCCCCC
>Mature Secondary Structure 
GHSLWQRRGMMKWLWQLALIGLLVLSPFRLSVAASEPSGTARSDTSQEYQSLISLFFAA
CCHHHHHCCHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHH
VRTGNDEVVNEFLSAGFPINQRNAESYTALMVAAYQGNAQTVELLLRFGANACLQDKRGN
HHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCC
TALMGALLKREIQIARALYQAECADNLRNKAGLSVQEFAELYGQSETLKALHQEKLAVSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHC
STQSRPLN
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA