| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081726
Identifier: 227081726
GI number: 227081726
Start: 1631929
End: 1632309
Strand: Direct
Name: 227081726
Synonym: VCM66_1512
Alternate gene names: NA
Gene position: 1631929-1632309 (Clockwise)
Preceding gene: 227081723
Following gene: 227081727
Centisome position: 56.42
GC content: 43.57
Gene sequence:
>381_bases ATGGAAAACAGAACGTGGTTATACAACACCTTTTTTAAGGCGCAGGATCGATTTCTAGCGTATGAGGTGGAGAGCGGTTT TGAACCCGAAGTGATCTATGATTACATTCATTGTGCGCGCTTACTCGCCTCACACCATTACCAAGGTTCAAAAGAGCAAA ACTTCCTGCTGTGTGAACTGTTTCTACGCCAAATCTACTTCCATTTTTTAGATGCCATTCAAGACCCTACACGTAGCCGC ATTTTCCGCCGCGTCTGCCTTGATTCCATCTATATCCTCTTGATGGAGCTCAACAAATGTTATCAACAAGTGGATAACGG TGAACTGCGTTTACGCCAACTCAAACAACAATTACAACGAATTCAAGCCCCGCTTGATTAA
Upstream 100 bases:
>100_bases TGTTCGGGTTGGGCTGCTTTTTTCGTCCATAAACGCAAAAGTCGGTTGCAATCAGCAGTAATGTGATAATAATTATCATT TAAATAAAGAAGGGGGGGAT
Downstream 100 bases:
>100_bases CCAAAAGGATCTGTTATGACTCGCGAATACCGAATTGAAAAAGACAGCATGGGTGAGGTCAAAGTCCCTGCTGATGCGCT TTATCAAGCACAAACTCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MENRTWLYNTFFKAQDRFLAYEVESGFEPEVIYDYIHCARLLASHHYQGSKEQNFLLCELFLRQIYFHFLDAIQDPTRSR IFRRVCLDSIYILLMELNKCYQQVDNGELRLRQLKQQLQRIQAPLD
Sequences:
>Translated_126_residues MENRTWLYNTFFKAQDRFLAYEVESGFEPEVIYDYIHCARLLASHHYQGSKEQNFLLCELFLRQIYFHFLDAIQDPTRSR IFRRVCLDSIYILLMELNKCYQQVDNGELRLRQLKQQLQRIQAPLD >Mature_126_residues MENRTWLYNTFFKAQDRFLAYEVESGFEPEVIYDYIHCARLLASHHYQGSKEQNFLLCELFLRQIYFHFLDAIQDPTRSR IFRRVCLDSIYILLMELNKCYQQVDNGELRLRQLKQQLQRIQAPLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15331; Mature: 15331
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENRTWLYNTFFKAQDRFLAYEVESGFEPEVIYDYIHCARLLASHHYQGSKEQNFLLCEL CCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH FLRQIYFHFLDAIQDPTRSRIFRRVCLDSIYILLMELNKCYQQVDNGELRLRQLKQQLQR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IQAPLD HCCCCC >Mature Secondary Structure MENRTWLYNTFFKAQDRFLAYEVESGFEPEVIYDYIHCARLLASHHYQGSKEQNFLLCEL CCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH FLRQIYFHFLDAIQDPTRSRIFRRVCLDSIYILLMELNKCYQQVDNGELRLRQLKQQLQR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IQAPLD HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA