| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is modB [H]
Identifier: 227081682
GI number: 227081682
Start: 1587099
End: 1587797
Strand: Direct
Name: modB [H]
Synonym: VCM66_1466
Alternate gene names: 227081682
Gene position: 1587099-1587797 (Clockwise)
Preceding gene: 227081681
Following gene: 227081683
Centisome position: 54.87
GC content: 51.65
Gene sequence:
>699_bases ATGAGTCTTTGGCAAACAACCCTAGATGCCTTGCATCTGTTGGTGAGTCTAGATCCTAAGCTATGGGAGATCGTTGCGGT CTCCTTTAGTGTTTCGCTAACGGCCATTGCTCTGGTGCTCATCCCCTCTGTGGTGCTCTCTTTTGTGCTGGCGTACACCA ATTTTCGCGGTAAATGGACTCTGCTTTCGCTGATCAATACCCTGCAAGCGGTTCCAACTGTCGTGATAGGTCTGCTGCTG TATATGTTGCTCTCACGCGCAGGCCCGCTGGGTGATTGGCAGATGCTGTTTACCCAGCAAGCGATGATTTTAGGTCAAGC ACTGATCTGTTTTCCGATTCTGGTTGCCATGATGCATGGTGCGTTGCAATCGACTGATCGCCGCTCGCTAGAAACTTCAA TGACGCTGGGAGCTTCCGTACCTAGGCTCTTTGCAACCTTAGTCTGGGAAGCGCGCTTTCCTTTAATGGCCGCAACCATT GCGGGTTTTTCCCGTATCGTGACCGAAGTTGGCTGCTCAATGATGGTCGGTGGCAATATCATGGGCTTGACCCGCAATAT CCCAACGGCCATTTCATTGGAAAGCAATAAAGGCGCTTTTGCGCAGGGGGTGGCGCTGGGTATGGTGCTGCTTGCCTTAG CGCTAGGGCTCAACTTTCTGCTCTCTTCCCTACGGGGCAAAGGCTATTTAAGGACATAA
Upstream 100 bases:
>100_bases TGATTGGCTGGTGAACCCTAAAGGCCAGCAGTTGATTAACGAGTTTAAAGTCAATGGCCAACAACTCTTTGTGGCCAATG CGGACAAGCAGTAATCCTCG
Downstream 100 bases:
>100_bases GGCCAATCATGACGATCAAACTTACCGCACAGCAGCTTTCCATGCGTTTTAAAGATCGCGTGTTATTTCATATTCCCGAG ATCGCCATCGGCCCTAATGA
Product: ABC transporter, permease protein
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSLWQTTLDALHLLVSLDPKLWEIVAVSFSVSLTAIALVLIPSVVLSFVLAYTNFRGKWTLLSLINTLQAVPTVVIGLLL YMLLSRAGPLGDWQMLFTQQAMILGQALICFPILVAMMHGALQSTDRRSLETSMTLGASVPRLFATLVWEARFPLMAATI AGFSRIVTEVGCSMMVGGNIMGLTRNIPTAISLESNKGAFAQGVALGMVLLALALGLNFLLSSLRGKGYLRT
Sequences:
>Translated_232_residues MSLWQTTLDALHLLVSLDPKLWEIVAVSFSVSLTAIALVLIPSVVLSFVLAYTNFRGKWTLLSLINTLQAVPTVVIGLLL YMLLSRAGPLGDWQMLFTQQAMILGQALICFPILVAMMHGALQSTDRRSLETSMTLGASVPRLFATLVWEARFPLMAATI AGFSRIVTEVGCSMMVGGNIMGLTRNIPTAISLESNKGAFAQGVALGMVLLALALGLNFLLSSLRGKGYLRT >Mature_231_residues SLWQTTLDALHLLVSLDPKLWEIVAVSFSVSLTAIALVLIPSVVLSFVLAYTNFRGKWTLLSLINTLQAVPTVVIGLLLY MLLSRAGPLGDWQMLFTQQAMILGQALICFPILVAMMHGALQSTDRRSLETSMTLGASVPRLFATLVWEARFPLMAATIA GFSRIVTEVGCSMMVGGNIMGLTRNIPTAISLESNKGAFAQGVALGMVLLALALGLNFLLSSLRGKGYLRT
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4662
COG function: function code H; ABC-type tungstate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=207, Percent_Identity=29.951690821256, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI87082099, Length=183, Percent_Identity=26.775956284153, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25001; Mature: 24870
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLWQTTLDALHLLVSLDPKLWEIVAVSFSVSLTAIALVLIPSVVLSFVLAYTNFRGKWT CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LLSLINTLQAVPTVVIGLLLYMLLSRAGPLGDWQMLFTQQAMILGQALICFPILVAMMHG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALQSTDRRSLETSMTLGASVPRLFATLVWEARFPLMAATIAGFSRIVTEVGCSMMVGGNI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCE MGLTRNIPTAISLESNKGAFAQGVALGMVLLALALGLNFLLSSLRGKGYLRT EEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLWQTTLDALHLLVSLDPKLWEIVAVSFSVSLTAIALVLIPSVVLSFVLAYTNFRGKWT CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LLSLINTLQAVPTVVIGLLLYMLLSRAGPLGDWQMLFTQQAMILGQALICFPILVAMMHG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALQSTDRRSLETSMTLGASVPRLFATLVWEARFPLMAATIAGFSRIVTEVGCSMMVGGNI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCE MGLTRNIPTAISLESNKGAFAQGVALGMVLLALALGLNFLLSSLRGKGYLRT EEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]