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The map label for this gene is yebS [H]

Identifier: 227081659

GI number: 227081659

Start: 1559444

End: 1560703

Strand: Direct

Name: yebS [H]

Synonym: VCM66_1443

Alternate gene names: 227081659

Gene position: 1559444-1560703 (Clockwise)

Preceding gene: 227081658

Following gene: 227081660

Centisome position: 53.91

GC content: 48.17

Gene sequence:

>1260_bases
TTGTGTTGTCCGCCTATGACCTCCTCATCCTCTTTATCTCATCATGCATCGCAGTCGGGTCAAGTTCGTTTGTGCCCCGG
CTGCGAACTGCCTATTGATGCGATTACGGTTGACCAAGCCCACAGCGCTCATTGCCCCCGTTGTGGCACGCTACTTTATC
GTGGCGGTAGCCCTTCTCTCTCCGGCGATCTTGCTCTTGCGGTCACTTGTTTGCTGCTGTTTATTCCTTCCCACTTTTTC
AGTTACATCGATATTCGACTGTTTGGTGTGATGATCCCAGCCACCTTGCCGCAAGGTGTATTCGCTTTGTGGGATGAAGG
TTACATCGCCTTGGCGTTATTGGTGCTGTTTTGTAGCTCGATTGCGCCACTGGTTTTATGTTTGAGTGTAGTCAGTGCTC
ATCTCGCCCTGCGTTTTCGCTATTTTCAGACCCTGCGTTACTCATTGCTCTTTATTCATCATCTCAAAGTCTGGGTCATG
ATCGATGTGTTCCTGGTTAGCGTGGCCGTGTCCTGCTTTAAGCTAAAAGATTACTCCGATATTTTTATCGGCCCCGGATT
ATTAGGGTTGGTGCTTCTGCAACTGTTTACGGTCTTACTGCTTAGTCGTATCAGTACTCGCCGCTATTGGGAAACCTGGC
AAGCTGAAACGGAATATGATTTGCCCGTCAAGCAGGTGCATTGCCATAACTGCCACCTTTCACAGCCAGAAAATGGTCAC
TGTGTTCGCTGTCAGCACAAGCTTTACCACAGAAAACCTAACTCTATAGAACGAACATGGGCTTATGTTTTAGCAGCAAC
GGTGGCGATTTTTCCTGCTAACTTGATCCCTATTTCTATTTTGATCACCAATGGTCAGCGCTTGGAAGATACGATTTTTT
CTGGTGTGGCTTCGCTCGTGAAAAATGGCATGTGGGGTATTGCGCTGATCATCTTTGTCGCCAGTATTGTGGTTCCCGTG
ATCAAAATCATTGGCCTCGCCTATCTCTTAATGGCCATCAAACTGAAACGTCACGTGCATCAGCGTCAACGTATGATGAT
TTATCGTGGCATCAAATGGATTGGCAAATGGTCGGTGATGGATCTGTTTGTCATCTCTATCATGCTGACATTGGTTGACC
GAGGTCAGATCCTCGATTTTACTCCCGGTTACGGGGCTGTCGCTTTTGGTATGGTCGTGGTGCTCACCATGTTAGCCGCG
GAAAGTTTAGATCCGCGCTTACTGTGGGATGAGCCCGACTCCACTCGTACTCAACAATAG

Upstream 100 bases:

>100_bases
CCACGAGTTACTCGAACAAGAAGGCTTGTACCAAACCCTTTATGGGAGTGTTCAGTCGCAGCACTAATGGTGTTACTAAT
GGTGTTAATGGCGGCTCCTA

Downstream 100 bases:

>100_bases
GTTGTTTGAATGAGTCAAGAAAATACAACGCAAACGTCATACACACCGGAAATCCGCAAACGTCGGGGCATCTCTCCGTT
GTGGATCTTACCCATAGTGA

Product: PqiA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MCCPPMTSSSSLSHHASQSGQVRLCPGCELPIDAITVDQAHSAHCPRCGTLLYRGGSPSLSGDLALAVTCLLLFIPSHFF
SYIDIRLFGVMIPATLPQGVFALWDEGYIALALLVLFCSSIAPLVLCLSVVSAHLALRFRYFQTLRYSLLFIHHLKVWVM
IDVFLVSVAVSCFKLKDYSDIFIGPGLLGLVLLQLFTVLLLSRISTRRYWETWQAETEYDLPVKQVHCHNCHLSQPENGH
CVRCQHKLYHRKPNSIERTWAYVLAATVAIFPANLIPISILITNGQRLEDTIFSGVASLVKNGMWGIALIIFVASIVVPV
IKIIGLAYLLMAIKLKRHVHQRQRMMIYRGIKWIGKWSVMDLFVISIMLTLVDRGQILDFTPGYGAVAFGMVVVLTMLAA
ESLDPRLLWDEPDSTRTQQ

Sequences:

>Translated_419_residues
MCCPPMTSSSSLSHHASQSGQVRLCPGCELPIDAITVDQAHSAHCPRCGTLLYRGGSPSLSGDLALAVTCLLLFIPSHFF
SYIDIRLFGVMIPATLPQGVFALWDEGYIALALLVLFCSSIAPLVLCLSVVSAHLALRFRYFQTLRYSLLFIHHLKVWVM
IDVFLVSVAVSCFKLKDYSDIFIGPGLLGLVLLQLFTVLLLSRISTRRYWETWQAETEYDLPVKQVHCHNCHLSQPENGH
CVRCQHKLYHRKPNSIERTWAYVLAATVAIFPANLIPISILITNGQRLEDTIFSGVASLVKNGMWGIALIIFVASIVVPV
IKIIGLAYLLMAIKLKRHVHQRQRMMIYRGIKWIGKWSVMDLFVISIMLTLVDRGQILDFTPGYGAVAFGMVVVLTMLAA
ESLDPRLLWDEPDSTRTQQ
>Mature_419_residues
MCCPPMTSSSSLSHHASQSGQVRLCPGCELPIDAITVDQAHSAHCPRCGTLLYRGGSPSLSGDLALAVTCLLLFIPSHFF
SYIDIRLFGVMIPATLPQGVFALWDEGYIALALLVLFCSSIAPLVLCLSVVSAHLALRFRYFQTLRYSLLFIHHLKVWVM
IDVFLVSVAVSCFKLKDYSDIFIGPGLLGLVLLQLFTVLLLSRISTRRYWETWQAETEYDLPVKQVHCHNCHLSQPENGH
CVRCQHKLYHRKPNSIERTWAYVLAATVAIFPANLIPISILITNGQRLEDTIFSGVASLVKNGMWGIALIIFVASIVVPV
IKIIGLAYLLMAIKLKRHVHQRQRMMIYRGIKWIGKWSVMDLFVISIMLTLVDRGQILDFTPGYGAVAFGMVVVLTMLAA
ESLDPRLLWDEPDSTRTQQ

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=402, Percent_Identity=37.8109452736318, Blast_Score=260, Evalue=9e-71,
Organism=Escherichia coli, GI1787183, Length=421, Percent_Identity=29.4536817102138, Blast_Score=176, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 46883; Mature: 46883

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCCPPMTSSSSLSHHASQSGQVRLCPGCELPIDAITVDQAHSAHCPRCGTLLYRGGSPSL
CCCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCC
SGDLALAVTCLLLFIPSHFFSYIDIRLFGVMIPATLPQGVFALWDEGYIALALLVLFCSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHH
IAPLVLCLSVVSAHLALRFRYFQTLRYSLLFIHHLKVWVMIDVFLVSVAVSCFKLKDYSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IFIGPGLLGLVLLQLFTVLLLSRISTRRYWETWQAETEYDLPVKQVHCHNCHLSQPENGH
CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCC
CVRCQHKLYHRKPNSIERTWAYVLAATVAIFPANLIPISILITNGQRLEDTIFSGVASLV
EEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHH
KNGMWGIALIIFVASIVVPVIKIIGLAYLLMAIKLKRHVHQRQRMMIYRGIKWIGKWSVM
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
DLFVISIMLTLVDRGQILDFTPGYGAVAFGMVVVLTMLAAESLDPRLLWDEPDSTRTQQ
HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MCCPPMTSSSSLSHHASQSGQVRLCPGCELPIDAITVDQAHSAHCPRCGTLLYRGGSPSL
CCCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCC
SGDLALAVTCLLLFIPSHFFSYIDIRLFGVMIPATLPQGVFALWDEGYIALALLVLFCSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHH
IAPLVLCLSVVSAHLALRFRYFQTLRYSLLFIHHLKVWVMIDVFLVSVAVSCFKLKDYSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IFIGPGLLGLVLLQLFTVLLLSRISTRRYWETWQAETEYDLPVKQVHCHNCHLSQPENGH
CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCC
CVRCQHKLYHRKPNSIERTWAYVLAATVAIFPANLIPISILITNGQRLEDTIFSGVASLV
EEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHH
KNGMWGIALIIFVASIVVPVIKIIGLAYLLMAIKLKRHVHQRQRMMIYRGIKWIGKWSVM
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
DLFVISIMLTLVDRGQILDFTPGYGAVAFGMVVVLTMLAAESLDPRLLWDEPDSTRTQQ
HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]